Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3623_(lpqG)_4062706_4063428
DateFri Aug 9 18:20:31 BST 2019
Unique Job ID63e3a1d8033a4514
SequenceMIRLVRHSIA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:69.270 Y:56.256 Z:68.798
Model (left) based on template c4hvzA_
Top template information
PDB header:membrane protein
Chain: A: PDB Molecule:26 kda periplasmic immunogenic protein;
PDBTitle: crystal structure of brucella abortus immunogenic bp26 protein
Confidence and coverage
Confidence:100.0% Coverage: 85%
203 residues ( 85% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c4hvzA_



100.0 27
PDB header:membrane protein
Chain: A: PDB Molecule:26 kda periplasmic immunogenic protein;
PDBTitle: crystal structure of brucella abortus immunogenic bp26 protein
2d1nyed_



50.2 17
Fold:OsmC-like
Superfamily:OsmC-like
Family:Ohr/OsmC resistance proteins
3c3k1dA_



27.7 17
PDB header:transferase
Chain: A: PDB Molecule:1,4-alpha-glucan-branching enzyme;
PDBTitle: crystal structure of glycogen branching enzyme synonym: 1,4-alpha-d-2 glucan:1,4-alpha-d-glucan 6-glucosyl-transferase from mycobacterium3 tuberculosis h37rv
4c2kxhB_



21.3 48
PDB header:protein binding
Chain: B: PDB Molecule:peptide of far upstream element-binding protein 1;
PDBTitle: solution structure of the first two rrm domains of fir in the complex2 with fbp nbox peptide
5d1k7ka_



20.8 15
Fold:Anticodon-binding domain-like
Superfamily:ITPase-like
Family:ITPase (Ham1)
6c1m7xC_



19.3 11
PDB header:transferase
Chain: C: PDB Molecule:1,4-alpha-glucan branching enzyme;
PDBTitle: the x-ray crystallographic structure of branching enzyme
7d2onfa1



18.8 14
Fold:OsmC-like
Superfamily:OsmC-like
Family:Ohr/OsmC resistance proteins
8c2lfpA_



18.7 15
PDB header:viral protein
Chain: A: PDB Molecule:bacteriophage spp1 complete nucleotide sequence;
PDBTitle: structure of bacteriophage spp1 gp17 protein
9c3amlA_



18.5 18
PDB header:transferase
Chain: A: PDB Molecule:os06g0726400 protein;
PDBTitle: structure of the starch branching enzyme i (bei) from oryza sativa l
10c3s0yA_



18.2 8
PDB header:motor protein
Chain: A: PDB Molecule:motility protein b;
PDBTitle: the crystal structure of the periplasmic domain of motb (residues 64-2 256).
11c3s0wB_



17.1 11
PDB header:motor protein
Chain: B: PDB Molecule:motility protein b;
PDBTitle: the crystal structure of the periplasmic domain of helicobacter pylori2 motb (residues 78-256).
12c2rrlA_



16.0 10
PDB header:protein transport
Chain: A: PDB Molecule:flagellar hook-length control protein;
PDBTitle: solution structure of the c-terminal domain of the flik
13d2c8ma1



15.9 27
Fold:Class II aaRS and biotin synthetases
Superfamily:Class II aaRS and biotin synthetases
Family:LplA-like
14d1ukka_



15.7 20
Fold:OsmC-like
Superfamily:OsmC-like
Family:Ohr/OsmC resistance proteins
15c2zf8A_



14.5 17
PDB header:structural protein
Chain: A: PDB Molecule:component of sodium-driven polar flagellar motor;
PDBTitle: crystal structure of moty
16d1m7xa3



14.1 11
Fold:TIM beta/alpha-barrel
Superfamily:(Trans)glycosidases
Family:Amylase, catalytic domain
17c5gquA_



13.6 11
PDB header:transferase
Chain: A: PDB Molecule:1,4-alpha-glucan branching enzyme glgb;
PDBTitle: crystal structure of branching enzyme from cyanothece sp. atcc 51142
18c4bzyC_



13.3 14
PDB header:transferase
Chain: C: PDB Molecule:1,4-alpha-glucan-branching enzyme;
PDBTitle: crystal structure of human glycogen branching enzyme (gbe1)
19c2x48B_



12.1 25
PDB header:viral protein
Chain: B: PDB Molecule:cag38821;
PDBTitle: orf 55 from sulfolobus islandicus rudivirus 1
20c5yrxA_



11.8 24
PDB header:dna binding protein
Chain: A: PDB Molecule:nucleoid-associated protein rv3716c;
PDBTitle: crystal structure of a hypothetical protein rv3716c from mycobacterium2 tuberculosis
21d1u07a_



not modelled 11.4 17
Fold:TolA/TonB C-terminal domain
Superfamily:TolA/TonB C-terminal domain
Family:TonB
22c3amkA_



not modelled 11.4 18
PDB header:transferase
Chain: A: PDB Molecule:os06g0726400 protein;
PDBTitle: structure of the starch branching enzyme i (bei) from oryza sativa l
23c2dgaA_



not modelled 11.3 17
PDB header:hydrolase
Chain: A: PDB Molecule:beta-glucosidase;
PDBTitle: crystal structure of hexameric beta-glucosidase in wheat
24c6d9nA_



not modelled 11.0 16
PDB header:oxidoreductase
Chain: A: PDB Molecule:organic hydroperoxide resistance protein;
PDBTitle: crystal structure of an organic hydroperoxide resistance protein from2 elizabethkingia anophelis with crystallant-derived thiocyanate bound
25c2wskA_



not modelled 10.9 14
PDB header:hydrolase
Chain: A: PDB Molecule:glycogen debranching enzyme;
PDBTitle: crystal structure of glycogen debranching enzyme glgx from2 escherichia coli k-12
26c3mgjA_



not modelled 10.9 14
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein mj1480;
PDBTitle: crystal structure of the saccharop_dh_n domain of mj1480 protein from2 methanococcus jannaschii. northeast structural genomics consortium3 target mjr83a.
27c5wtlB_



not modelled 10.8 18
PDB header:membrane protein
Chain: B: PDB Molecule:ompa family protein;
PDBTitle: crystal structure of the periplasmic portion of outer membrane protein2 a (ompa) from capnocytophaga gingivalis
28c4jhoA_



not modelled 10.6 19
PDB header:hydrolase
Chain: A: PDB Molecule:beta-mannosidase/beta-glucosidase;
PDBTitle: structural analysis and insights into glycon specificity of the rice2 gh1 os7bglu26 beta-d-mannosidase
29c6mjnC_



not modelled 10.5 17
PDB header:oxidoreductase
Chain: C: PDB Molecule:organic hydroperoxide resistance protein;
PDBTitle: crystal structure of an organic hydroperoxide resistance protein osmc,2 predicted redox protein, regulator of sulfide bond formation from3 legionella pneumophila
30c2o0i1_



not modelled 10.2 10
PDB header:surface active protein
Chain: 1: PDB Molecule:c protein alpha-antigen;
PDBTitle: crystal structure of the r185a mutant of the n-terminal domain of the2 group b streptococcus alpha c protein
31c1mg1A_



not modelled 10.1 27
PDB header:viral protein
Chain: A: PDB Molecule:protein (htlv-1 gp21 ectodomain/maltose-binding protein
PDBTitle: htlv-1 gp21 ectodomain/maltose-binding protein chimera
32d1jjcb4



not modelled 9.8 12
Fold:Ferredoxin-like
Superfamily:Anticodon-binding domain of PheRS
Family:Anticodon-binding domain of PheRS
33d2opla1



not modelled 9.7 13
Fold:OsmC-like
Superfamily:OsmC-like
Family:Ohr/OsmC resistance proteins
34c3cyqM_



not modelled 8.8 8
PDB header:membrane protein
Chain: M: PDB Molecule:chemotaxis protein motb;
PDBTitle: the crystal structure of the complex of the c-terminal domain of2 helicobacter pylori motb (residues 125-256) with n-acetylmuramic acid
35c1zb8B_



not modelled 8.7 14
PDB header:oxidoreductase
Chain: B: PDB Molecule:organic hydroperoxide resistance protein;
PDBTitle: crystal structure of xylella fastidiosa organic peroxide resistance2 protein
36c2ql8A_



not modelled 8.4 11
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative redox protein;
PDBTitle: crystal structure of a putative redox protein (lsei_0423) from2 lactobacillus casei atcc 334 at 1.50 a resolution
37c1lqlE_



not modelled 8.1 12
PDB header:unknown function
Chain: E: PDB Molecule:osmotical inducible protein c like family;
PDBTitle: crystal structure of osmc like protein from mycoplasma2 pneumoniae
38d1lqla_



not modelled 8.1 12
Fold:OsmC-like
Superfamily:OsmC-like
Family:Ohr/OsmC resistance proteins
39c6izhE_



not modelled 7.7 18
PDB header:hydrolase
Chain: E: PDB Molecule:2-aminomuconate deaminase;
PDBTitle: crystal structure of deaminase amne from pseudomonas sp. ap-3
40c2grxC_



not modelled 7.7 17
PDB header:metal transport
Chain: C: PDB Molecule:protein tonb;
PDBTitle: crystal structure of tonb in complex with fhua, e. coli2 outer membrane receptor for ferrichrome
41c2b99A_



not modelled 7.6 17
PDB header:transferase
Chain: A: PDB Molecule:riboflavin synthase;
PDBTitle: crystal structure of an archaeal pentameric riboflavin2 synthase complex with a substrate analog inhibitor
42c4y7jE_



not modelled 7.6 17
PDB header:membrane protein,transport protein
Chain: E: PDB Molecule:large conductance mechanosensitive channel protein,
PDBTitle: structure of an archaeal mechanosensitive channel in expanded state
43c1bf2A_



not modelled 7.2 17
PDB header:hydrolase
Chain: A: PDB Molecule:isoamylase;
PDBTitle: structure of pseudomonas isoamylase
44d2aizp1



not modelled 7.2 20
Fold:Bacillus chorismate mutase-like
Superfamily:OmpA-like
Family:OmpA-like
45c1qhoA_



not modelled 7.1 19
PDB header:hydrolase
Chain: A: PDB Molecule:alpha-amylase;
PDBTitle: five-domain alpha-amylase from bacillus stearothermophilus,2 maltose/acarbose complex
46c4f7dA_



not modelled 6.8 17
PDB header:oxidoreductase
Chain: A: PDB Molecule:ferredoxin--nadp reductase;
PDBTitle: crystal structure of ferredoxin-nadp reductase from burkholderia2 thailandensis e264
47c2mblA_



not modelled 6.7 12
PDB header:de novo protein
Chain: A: PDB Molecule:top7 fold protein top7m13;
PDBTitle: solution nmr structure of de novo designed top7 fold protein top7m13,2 northeast structural genomics consortium (nesg) target or33
48d1e4mm_



not modelled 6.6 15
Fold:TIM beta/alpha-barrel
Superfamily:(Trans)glycosidases
Family:Family 1 of glycosyl hydrolase
49c1xx3A_



not modelled 6.4 17
PDB header:transport protein
Chain: A: PDB Molecule:tonb protein;
PDBTitle: solution structure of escherichia coli tonb-ctd
50c3m07A_



not modelled 6.4 15
PDB header:unknown function
Chain: A: PDB Molecule:putative alpha amylase;
PDBTitle: 1.4 angstrom resolution crystal structure of putative alpha amylase2 from salmonella typhimurium.
51c5zu0B_



not modelled 6.2 15
PDB header:transferase
Chain: B: PDB Molecule:protein arginine methyltransferase ndufaf7 homolog,
PDBTitle: proteobacterial origin of protein arginine methylation and regulation2 of complex i assembly by mida
52c2by0A_



not modelled 6.2 15
PDB header:hydrolase
Chain: A: PDB Molecule:maltooligosyltrehalose trehalohydrolase;
PDBTitle: is radiation damage dependent on the dose-rate used during2 macromolecular crystallography data collection
53d2hqsc1



not modelled 6.1 18
Fold:Bacillus chorismate mutase-like
Superfamily:OmpA-like
Family:OmpA-like
54c2l26A_



not modelled 6.0 27
PDB header:membrane protein
Chain: A: PDB Molecule:uncharacterized protein rv0899/mt0922;
PDBTitle: rv0899 from mycobacterium tuberculosis contains two separated domains
55c3mhyC_



not modelled 5.9 10
PDB header:signaling protein
Chain: C: PDB Molecule:pii-like protein pz;
PDBTitle: a new pii protein structure
56d1qwia_



not modelled 5.6 17
Fold:OsmC-like
Superfamily:OsmC-like
Family:Ohr/OsmC resistance proteins
57d1uoka2



not modelled 5.6 19
Fold:TIM beta/alpha-barrel
Superfamily:(Trans)glycosidases
Family:Amylase, catalytic domain
58c2x7jA_



not modelled 5.6 13
PDB header:transferase
Chain: A: PDB Molecule:2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene
PDBTitle: structure of the menaquinone biosynthesis protein mend from2 bacillus subtilis
59c3bmwA_



not modelled 5.6 17
PDB header:transferase
Chain: A: PDB Molecule:cyclomaltodextrin glucanotransferase;
PDBTitle: cyclodextrin glycosyl transferase from thermoanerobacterium2 thermosulfurigenes em1 mutant s77p complexed with a maltoheptaose3 inhibitor
60c1nvmB_



not modelled 5.3 21
PDB header:lyase/oxidoreductase
Chain: B: PDB Molecule:acetaldehyde dehydrogenase (acylating);
PDBTitle: crystal structure of a bifunctional aldolase-dehydrogenase :2 sequestering a reactive and volatile intermediate
61d1n2fa_



not modelled 5.2 11
Fold:OsmC-like
Superfamily:OsmC-like
Family:Ohr/OsmC resistance proteins
62c3czkA_



not modelled 5.2 12
PDB header:hydrolase
Chain: A: PDB Molecule:sucrose hydrolase;
PDBTitle: crystal structure analysis of sucrose hydrolase(suh) e322q-sucrose2 complex

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