Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3626c_(-)_4065030_4066082
DateFri Aug 9 18:20:31 BST 2019
Unique Job IDba1a9a231c8eca3a
SequenceVTGASELTLG ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:54.688 Y:57.039 Z:57.343
Model (left) based on template c3cmnA_
Top template information
PDB header:hydrolase
Chain: A: PDB Molecule:putative hydrolase;
PDBTitle: crystal structure of a putative hydrolase with a novel fold2 from chloroflexus aurantiacus
Confidence and coverage
Confidence:100.0% Coverage: 84%
294 residues ( 84% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3cmnA_



100.0 33
PDB header:hydrolase
Chain: A: PDB Molecule:putative hydrolase;
PDBTitle: crystal structure of a putative hydrolase with a novel fold2 from chloroflexus aurantiacus
2d3cmna1



100.0 33
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Caur0242-like
3c4jiuA_



49.3 17
PDB header:hydrolase
Chain: A: PDB Molecule:proabylysin;
PDBTitle: crystal structure of the metallopeptidase zymogen of pyrococcus abyssi2 abylysin
4d1nkzb_



46.1 38
Fold:Light-harvesting complex subunits
Superfamily:Light-harvesting complex subunits
Family:Light-harvesting complex subunits
5c4clvB_



41.8 11
PDB header:metal binding protein
Chain: B: PDB Molecule:nickel-cobalt-cadmium resistance protein nccx;
PDBTitle: crystal structure of dodecylphosphocholine-solubilized nccx2 from cupriavidus metallidurans 31a
6c4jixB_



41.7 27
PDB header:hydrolase
Chain: B: PDB Molecule:projannalysin;
PDBTitle: crystal structure of the metallopeptidase zymogen of2 methanocaldococcus jannaschii jannalysin
7c3u1dA_



33.1 14
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: the structure of a protein with a gntr superfamily winged-helix-turn-2 helix domain from halomicrobium mukohataei.
8c3cqxD_



26.5 15
PDB header:chaperone
Chain: D: PDB Molecule:bag family molecular chaperone regulator 2;
PDBTitle: chaperone complex
9c5xbvA_



26.2 13
PDB header:hydrolase
Chain: A: PDB Molecule:wss1p;
PDBTitle: crystal structure of wss1 mutant from saccharomyces cerevisiae
10c4b24A_



23.2 16
PDB header:hydrolase/dna
Chain: A: PDB Molecule:probable dna-3-methyladenine glycosylase 2;
PDBTitle: unprecedented sculpting of dna at abasic sites by dna glycoslase2 homolog mag2
11c5ldeB_



21.2 20
PDB header:viral protein
Chain: B: PDB Molecule:immunoglobulin g-binding protein g,viral flice protein;
PDBTitle: crystal structure of a vflip-ikkgamma stapled peptide dimer
12d1a2za_



21.0 12
Fold:Phosphorylase/hydrolase-like
Superfamily:Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
Family:Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
13d2cwla1



20.6 5
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Manganese catalase (T-catalase)
14d1iofa_



20.4 11
Fold:Phosphorylase/hydrolase-like
Superfamily:Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
Family:Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
15c5z5mB_



19.1 9
PDB header:lyase
Chain: B: PDB Molecule:predicted protein;
PDBTitle: crystal structure of (s)-allantoin synthase
16c3zdoC_



18.5 40
PDB header:viral protein
Chain: C: PDB Molecule:phosphoprotein;
PDBTitle: tetramerization domain of measles virus phosphoprotein
17d1e3oc2



18.1 11
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:POU-specific domain
18c6et5u_



14.8 25
PDB header:photosynthesis
Chain: U: PDB Molecule:light-harvesting protein b-1015 gamma chain;
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
19c5mtwD_



14.8 16
PDB header:chaperone
Chain: D: PDB Molecule:secb-like chaperone rv1957;
PDBTitle: mycobacterium tuberculosis rv1957 secb-like chaperone in complex with2 a chad peptide from rv1956 higa1 antitoxin
20c1mqrA_



14.8 26
PDB header:hydrolase
Chain: A: PDB Molecule:alpha-d-glucuronidase;
PDBTitle: the crystal structure of alpha-d-glucuronidase (e386q) from bacillus2 stearothermophilus t-6
21c6h56A_



not modelled 14.7 20
PDB header:metal binding protein
Chain: A: PDB Molecule:effector domain of pseudomonas aeruginosa vgrg2b;
PDBTitle: effector domain of pseudomonas aeruginosa vgrg2b
22d1l8na1



not modelled 14.6 26
Fold:TIM beta/alpha-barrel
Superfamily:(Trans)glycosidases
Family:alpha-D-glucuronidase/Hyaluronidase catalytic domain
23c4yk3B_



not modelled 14.1 15
PDB header:protein binding
Chain: B: PDB Molecule:bepe protein;
PDBTitle: crystal structure of the bid domain of bepe from bartonella henselae
24d1au7a2



not modelled 13.6 25
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:POU-specific domain
25c3giuA_



not modelled 12.3 16
PDB header:hydrolase
Chain: A: PDB Molecule:pyrrolidone-carboxylate peptidase;
PDBTitle: 1.25 angstrom crystal structure of pyrrolidone-carboxylate peptidase2 (pcp) from staphylococcus aureus
26c3qzcA_



not modelled 11.4 10
PDB header:signaling protein
Chain: A: PDB Molecule:periplasmic protein cpxp;
PDBTitle: structure of the periplasmic stress response protein cpxp
27d1jo5a_



not modelled 11.3 23
Fold:Light-harvesting complex subunits
Superfamily:Light-harvesting complex subunits
Family:Light-harvesting complex subunits
28c3igeA_



not modelled 10.5 14
PDB header:viral protein
Chain: A: PDB Molecule:soc small outer capsid protein;
PDBTitle: small outer capsid protein (soc) from bacteriophage rb69
29d1ngka_



not modelled 10.1 11
Fold:Globin-like
Superfamily:Globin-like
Family:Truncated hemoglobin
30d1lmla_



not modelled 10.0 26
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Leishmanolysin
31d1jkva_



not modelled 9.9 28
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Manganese catalase (T-catalase)
32d1llib_



not modelled 9.2 24
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:Phage repressors
33d1lmb3_



not modelled 8.7 21
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:Phage repressors
34d1oqya2



not modelled 8.6 21
Fold:RuvA C-terminal domain-like
Superfamily:UBA-like
Family:UBA domain
35c2kvrA_



not modelled 8.0 20
PDB header:protein binding
Chain: A: PDB Molecule:ubiquitin carboxyl-terminal hydrolase 7;
PDBTitle: solution nmr structure of human ubiquitin specific protease usp7 ubl2 domain (residues 537-664). nesg target hr4395c/ sgc-toronto
36c6mdxA_



not modelled 8.0 30
PDB header:dna binding protein/dna
Chain: A: PDB Molecule:sprt-like domain-containing protein spartan;
PDBTitle: mechanism of protease dependent dpc repair
37c6nu9A_



not modelled 8.0 21
PDB header:viral protein
Chain: A: PDB Molecule:zinc-binding non-structural protein;
PDBTitle: crystal structure of a zinc-binding non-structural protein from the2 hepatitis e virus
38c2ewtA_



not modelled 7.9 14
PDB header:dna binding protein
Chain: A: PDB Molecule:putative dna-binding protein;
PDBTitle: crystal structure of the dna-binding domain of bldd
39c5tf3A_



not modelled 7.7 21
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative membrane protein;
PDBTitle: crystal structure of protein of unknown function ypo2564 from yersinia2 pestis
40c5vf3O_



not modelled 7.6 10
PDB header:virus
Chain: O: PDB Molecule:small outer capsid protein;
PDBTitle: bacteriophage t4 isometric capsid
41c3epvB_



not modelled 7.5 11
PDB header:metal binding protein
Chain: B: PDB Molecule:nickel and cobalt resistance protein cnrr;
PDBTitle: x-ray structure of the metal-sensor cnrx in both the apo- and copper-2 bound forms
42d2ce7a1



not modelled 7.5 25
Fold:FtsH protease domain-like
Superfamily:FtsH protease domain-like
Family:FtsH protease domain-like
43c6fqbE_



not modelled 7.3 9
PDB header:ligase
Chain: E: PDB Molecule:cobyric acid synthase;
PDBTitle: murt/gatd peptidoglycan amidotransferase complex from streptococcus2 pneumoniae r6
44c3ty8A_



not modelled 7.3 9
PDB header:transferase
Chain: A: PDB Molecule:polynucleotide 2',3'-cyclic phosphate phosphodiesterase /
PDBTitle: crystal structure of c. thermocellum pnkp ligase domain apo form
45c4gxhC_



not modelled 7.3 13
PDB header:hydrolase
Chain: C: PDB Molecule:pyrrolidone-carboxylate peptidase;
PDBTitle: crystal structure of a pyrrolidone-carboxylate peptidase 1 (target id2 nysgrc-012831) from xenorhabdus bovienii ss-2004
46c1pbyA_



not modelled 7.1 12
PDB header:oxidoreductase
Chain: A: PDB Molecule:quinohemoprotein amine dehydrogenase 60 kda subunit;
PDBTitle: structure of the phenylhydrazine adduct of the quinohemoprotein amine2 dehydrogenase from paracoccus denitrificans at 1.7 a resolution
47c4e6nC_



not modelled 7.0 9
PDB header:protein binding
Chain: C: PDB Molecule:metallophosphoesterase;
PDBTitle: crystal structure of bacterial pnkp-c/hen1-n heterodimer
48d1q1ra3



not modelled 6.9 11
Fold:CO dehydrogenase flavoprotein C-domain-like
Superfamily:FAD/NAD-linked reductases, dimerisation (C-terminal) domain
Family:FAD/NAD-linked reductases, dimerisation (C-terminal) domain
49d2di4a1



not modelled 6.9 19
Fold:FtsH protease domain-like
Superfamily:FtsH protease domain-like
Family:FtsH protease domain-like
50c4ivvA_



not modelled 6.9 15
PDB header:hydrolase
Chain: A: PDB Molecule:autolysin;
PDBTitle: catalytic amidase domain of the major autolysin lyta from2 streptococcus pneumaniae
51c2di4B_



not modelled 6.9 19
PDB header:hydrolase
Chain: B: PDB Molecule:cell division protein ftsh homolog;
PDBTitle: crystal structure of the ftsh protease domain
52d1h41a1



not modelled 6.9 21
Fold:TIM beta/alpha-barrel
Superfamily:(Trans)glycosidases
Family:alpha-D-glucuronidase/Hyaluronidase catalytic domain
53c3o39A_



not modelled 6.8 8
PDB header:chaperone
Chain: A: PDB Molecule:periplasmic protein related to spheroblast formation;
PDBTitle: crystal structure of spy
54c2da4A_



not modelled 6.5 21
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein dkfzp686k21156;
PDBTitle: solution structure of the homeobox domain of the2 hypothetical protein, dkfzp686k21156
55c5i44E_



not modelled 6.4 26
PDB header:dna binding protein/dna
Chain: E: PDB Molecule:chromosome-anchoring protein raca;
PDBTitle: structure of raca-dna complex; p21 form
56c4yk2B_



not modelled 6.3 9
PDB header:protein binding
Chain: B: PDB Molecule:bartonella effector protein (bep) substrate of virb t4ss;
PDBTitle: crystal structure of the bid domain of bep9 from bartonella2 clarridgeiae
57c2xsdC_



not modelled 6.2 25
PDB header:transcription/dna
Chain: C: PDB Molecule:pou domain, class 3, transcription factor 1;
PDBTitle: crystal structure of the dimeric oct-6 (pou3f1) pou domain2 bound to palindromic more dna
58c1gqkB_



not modelled 6.1 21
PDB header:hydrolase
Chain: B: PDB Molecule:alpha-d-glucuronidase;
PDBTitle: structure of pseudomonas cellulosa alpha-d-glucuronidase complexed2 with glucuronic acid
59d1y60a_



not modelled 6.1 13
Fold:Ribosomal protein S5 domain 2-like
Superfamily:Ribosomal protein S5 domain 2-like
Family:Formaldehyde-activating enzyme, FAE
60c3oeoD_



not modelled 6.1 8
PDB header:signaling protein
Chain: D: PDB Molecule:spheroplast protein y;
PDBTitle: the crystal structure e. coli spy
61c3f6wE_



not modelled 6.1 17
PDB header:dna binding protein
Chain: E: PDB Molecule:xre-family like protein;
PDBTitle: xre-family like protein from pseudomonas syringae pv. tomato str.2 dc3000
62c2rn7A_



not modelled 5.7 21
PDB header:unknown function
Chain: A: PDB Molecule:is629 orfa;
PDBTitle: nmr solution structure of tnpe protein from shigella2 flexneri. northeast structural genomics target sfr125
63c1l0oC_



not modelled 5.7 27
PDB header:protein binding
Chain: C: PDB Molecule:sigma factor;
PDBTitle: crystal structure of the bacillus stearothermophilus anti-2 sigma factor spoiiab with the sporulation sigma factor3 sigmaf
64d1l0oc_



not modelled 5.7 27
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors
Family:Sigma4 domain
65d1c6vx_



not modelled 5.7 31
Fold:SH3-like barrel
Superfamily:DNA-binding domain of retroviral integrase
Family:DNA-binding domain of retroviral integrase
66c1c6vX_



not modelled 5.7 31
PDB header:dna binding protein
Chain: X: PDB Molecule:protein (siu89134);
PDBTitle: siv integrase (catalytic domain + dna biding domain comprising2 residues 50-293) mutant with phe 185 replaced by his (f185h)
67c4pdnA_



not modelled 5.7 43
PDB header:oxidoreductase
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of e. coli yfcm
68d2hrca1



not modelled 5.6 19
Fold:Chelatase-like
Superfamily:Chelatase
Family:Ferrochelatase
69d1tjla1



not modelled 5.3 13
Fold:Long alpha-hairpin
Superfamily:DnaK suppressor protein DksA, alpha-hairpin domain
Family:DnaK suppressor protein DksA, alpha-hairpin domain
70c3b4rA_



not modelled 5.3 50
PDB header:hydrolase
Chain: A: PDB Molecule:putative zinc metalloprotease mj0392;
PDBTitle: site-2 protease from methanocaldococcus jannaschii

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