Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3629c_(-)_4068136_4069233
DateFri Aug 9 18:20:31 BST 2019
Unique Job IDe117942a928f1490
SequenceMSTFRIFGFS ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:25.989 Y:51.597 Z:20.869
Model (left) based on template c1bhbA_
Top template information
PDB header:photoreceptor
Chain: A: PDB Molecule:bacteriorhodopsin;
PDBTitle: three-dimensional structure of (1-71) bacterioopsin2 solubilized in methanol-chloroform and sds micelles3 determined by 15n-1h heteronuclear nmr spectroscopy
Confidence and coverage
Confidence: 44.3% Coverage: 15%
54 residues ( 15% of your sequence) have been modelled with 44.3% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
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3D viewing
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c1bhbA_



44.3 26
PDB header:photoreceptor
Chain: A: PDB Molecule:bacteriorhodopsin;
PDBTitle: three-dimensional structure of (1-71) bacterioopsin2 solubilized in methanol-chloroform and sds micelles3 determined by 15n-1h heteronuclear nmr spectroscopy
2c5frgA_



22.8 23
PDB header:protein binding
Chain: A: PDB Molecule:formin-binding protein 1-like;
PDBTitle: the nmr structure of the cdc42-interacting region of toca1
3c4ainB_



20.7 20
PDB header:membrane protein
Chain: B: PDB Molecule:glycine betaine transporter betp;
PDBTitle: crystal structure of betp with asymmetric protomers.
4c2ke4A_



15.1 31
PDB header:membrane protein
Chain: A: PDB Molecule:cdc42-interacting protein 4;
PDBTitle: the nmr structure of the tc10 and cdc42 interacting domain2 of cip4
5c2rlfA_



12.2 35
PDB header:proton transport
Chain: A: PDB Molecule:matrix protein 2;
PDBTitle: proton channel m2 from influenza a in complex with2 inhibitor rimantadine
6c4ribA_



11.2 24
PDB header:hydrolase/dna
Chain: A: PDB Molecule:fanconi-associated nuclease 1;
PDBTitle: fan1 nuclease bound to 5' phosphorylated p(dt) single flap dna
7c5cwsF_



9.6 25
PDB header:protein transport
Chain: F: PDB Molecule:nucleoporin nic96;
PDBTitle: crystal structure of the intact chaetomium thermophilum nsp1-nup49-2 nup57 channel nucleoporin heterotrimer bound to its nic96 nuclear3 pore complex attachment site
8c5cwsL_



9.6 25
PDB header:protein transport
Chain: L: PDB Molecule:nucleoporin nic96;
PDBTitle: crystal structure of the intact chaetomium thermophilum nsp1-nup49-2 nup57 channel nucleoporin heterotrimer bound to its nic96 nuclear3 pore complex attachment site
9c3pcqX_



7.8 41
PDB header:photosynthesis
Chain: X: PDB Molecule:photosystem i 4.8k protein;
PDBTitle: femtosecond x-ray protein nanocrystallography
10c6hu9g_



5.9 14
PDB header:oxidoreductase/electron transport
Chain: G: PDB Molecule:cytochrome b-c1 complex subunit 7;
PDBTitle: iii2-iv2 mitochondrial respiratory supercomplex from s. cerevisiae
11c6hu9s_



5.9 14
PDB header:oxidoreductase/electron transport
Chain: S: PDB Molecule:cytochrome b-c1 complex subunit 8;
PDBTitle: iii2-iv2 mitochondrial respiratory supercomplex from s. cerevisiae
12c2odbB_



5.7 30
PDB header:protein binding
Chain: B: PDB Molecule:serine/threonine-protein kinase pak 6;
PDBTitle: the crystal structure of human cdc42 in complex with the crib domain2 of human p21-activated kinase 6 (pak6)
13c4mitE_



5.3 21
PDB header:signaling protein
Chain: E: PDB Molecule:serine/threonine protein kinase pak, putative;
PDBTitle: crystal structure of e. histolytica racc bound to the ehpak4 pbd
14c4mitG_



5.3 21
PDB header:signaling protein
Chain: G: PDB Molecule:serine/threonine protein kinase pak, putative;
PDBTitle: crystal structure of e. histolytica racc bound to the ehpak4 pbd
15d1y82a1



5.1 32
Fold:PIN domain-like
Superfamily:PIN domain-like
Family:PIN domain

Binding site prediction 

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below