Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3639c_(-)_4078063_4078629
DateFri Aug 9 18:20:32 BST 2019
Unique Job ID5c89ff7959fffd58
SequenceMAGLFTPPAS ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:28.341 Y:16.691 Z:32.970
Model (left) based on template c4d0uD_
Top template information
PDB header:viral protein
Chain: D: PDB Molecule:fiber protein;
PDBTitle: crystal structure of the fiber head domain of the atadenovirus snake2 adenovirus 1, selenomethionine-derivative
Confidence and coverage
Confidence: 41.5% Coverage: 20%
38 residues ( 20% of your sequence) have been modelled with 41.5% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c4d0uD_



41.5 37
PDB header:viral protein
Chain: D: PDB Molecule:fiber protein;
PDBTitle: crystal structure of the fiber head domain of the atadenovirus snake2 adenovirus 1, selenomethionine-derivative
2d1fy7a_



27.5 46
Fold:Acyl-CoA N-acyltransferases (Nat)
Superfamily:Acyl-CoA N-acyltransferases (Nat)
Family:N-acetyl transferase, NAT
3d2ozua1



27.2 46
Fold:Acyl-CoA N-acyltransferases (Nat)
Superfamily:Acyl-CoA N-acyltransferases (Nat)
Family:N-acetyl transferase, NAT
4c5gk9A_



20.8 38
PDB header:transferase/metal binding protein
Chain: A: PDB Molecule:histone acetyltransferase kat7;
PDBTitle: crystal structure of human hbo1 in complex with brpf2
5c2ou2A_



20.7 50
PDB header:transferase
Chain: A: PDB Molecule:histone acetyltransferase htatip;
PDBTitle: acetyltransferase domain of human hiv-1 tat interacting2 protein, 60kda, isoform 3
6c3u2aA_



17.5 75
PDB header:hydrolase
Chain: A: PDB Molecule:ggdef family protein;
PDBTitle: adaptor dependent degradation of a cell-cycle regulator reveals2 diversity in substrate architectures
7d2giva1



17.2 38
Fold:Acyl-CoA N-acyltransferases (Nat)
Superfamily:Acyl-CoA N-acyltransferases (Nat)
Family:N-acetyl transferase, NAT
8c2givA_



17.2 38
PDB header:transferase
Chain: A: PDB Molecule:probable histone acetyltransferase myst1;
PDBTitle: human myst histone acetyltransferase 1
9c3r27A_



12.4 15
PDB header:protein binding
Chain: A: PDB Molecule:heterogeneous nuclear ribonucleoprotein l;
PDBTitle: crystal structure of the first rrm domain of heterogeneous nuclear2 ribonucleoprotein l (hnrnp l)
10d1wi8a_



11.5 23
Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
11c3eukL_



11.4 47
PDB header:cell cycle
Chain: L: PDB Molecule:chromosome partition protein muke;
PDBTitle: crystal structure of muke-mukf(residues 292-443)-mukb(head domain)-2 atpgammas complex, asymmetric dimer
12c3s8sA_



11.0 29
PDB header:transcription
Chain: A: PDB Molecule:histone-lysine n-methyltransferase setd1a;
PDBTitle: crystal structure of the rrm domain of human setd1a
13d1yuaa1



10.8 63
Fold:Rubredoxin-like
Superfamily:Zinc beta-ribbon
Family:Prokaryotic DNA topoisomerase I, a C-terminal fragment
14d1sjqa_



10.3 20
Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
15c2n3oA_



10.1 19
PDB header:rna binding protein/rna
Chain: A: PDB Molecule:polypyrimidine tract-binding protein 1;
PDBTitle: structure of ptb rrm1(41-163) bound to an rna stemloop containing a2 structured loop derived from viral internal ribosomal entry site rna
16c3c5mC_



9.3 21
PDB header:lyase
Chain: C: PDB Molecule:oligogalacturonate lyase;
PDBTitle: crystal structure of oligogalacturonate lyase (vpa0088)2 from vibrio parahaemolyticus. northeast structural3 genomics consortium target vpr199
17c1yuaA_



9.1 63
PDB header:dna binding protein
Chain: A: PDB Molecule:topoisomerase i;
PDBTitle: c-terminal domain of escherichia coli topoisomerase i
18c2kvxA_



9.0 54
PDB header:plant protein
Chain: A: PDB Molecule:kalata-b12;
PDBTitle: solution structure of kalata b12
19d1wdka2



8.7 46
Fold:6-phosphogluconate dehydrogenase C-terminal domain-like
Superfamily:6-phosphogluconate dehydrogenase C-terminal domain-like
Family:HCDH C-domain-like
20c3ctvA_



7.0 38
PDB header:oxidoreductase
Chain: A: PDB Molecule:3-hydroxyacyl-coa dehydrogenase;
PDBTitle: crystal structure of central domain of 3-hydroxyacyl-coa dehydrogenase2 from archaeoglobus fulgidus
21d2dlxa1



not modelled 6.8 26
Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:UAS domain
22c2na7B_



not modelled 6.7 44
PDB header:apoptosis
Chain: B: PDB Molecule:tumor necrosis factor receptor superfamily member 6;
PDBTitle: transmembrane domain of human fas/cd95 death receptor
23c2na7C_



not modelled 6.7 44
PDB header:apoptosis
Chain: C: PDB Molecule:tumor necrosis factor receptor superfamily member 6;
PDBTitle: transmembrane domain of human fas/cd95 death receptor
24c2na7A_



not modelled 6.6 44
PDB header:apoptosis
Chain: A: PDB Molecule:tumor necrosis factor receptor superfamily member 6;
PDBTitle: transmembrane domain of human fas/cd95 death receptor
25c3mjjD_



not modelled 6.5 36
PDB header:hydrolase
Chain: D: PDB Molecule:predicted acetamidase/formamidase;
PDBTitle: crystal structure analysis of a recombinant predicted2 acetamidase/formamidase from the thermophile thermoanaerobacter3 tengcongensis
26c3couA_



not modelled 6.5 62
PDB header:hydrolase
Chain: A: PDB Molecule:nucleoside diphosphate-linked moiety x motif 16;
PDBTitle: crystal structure of human nudix motif 16 (nudt16)
27d1vqox1



not modelled 6.3 24
Fold:Ribosomal protein L31e
Superfamily:Ribosomal protein L31e
Family:Ribosomal protein L31e
28c2ii1A_



not modelled 6.1 32
PDB header:hydrolase
Chain: A: PDB Molecule:acetamidase;
PDBTitle: crystal structure of acetamidase (10172637) from bacillus halodurans2 at 1.95 a resolution
29c1z5wA_



not modelled 6.0 25
PDB header:structural protein
Chain: A: PDB Molecule:tubulin gamma-1 chain;
PDBTitle: crystal structure of gamma-tubulin bound to gtp
30c2j8aA_



not modelled 6.0 33
PDB header:transferase
Chain: A: PDB Molecule:histone-lysine n-methyltransferase, h3 lysine-4
PDBTitle: x-ray structure of the n-terminus rrm domain of set1
31d1su3a1



not modelled 6.0 33
Fold:PGBD-like
Superfamily:PGBD-like
Family:MMP N-terminal domain
32c5oayA_



not modelled 5.8 32
PDB header:signaling protein
Chain: A: PDB Molecule:transcriptional regulator whib1;
PDBTitle: m. tuberculosis [4fe-4s] protein whib1 is a four-helix bundle that2 forms a no-sensitive complex with sigmaa and regulates the major3 virulence factor esx-1
33d2ad9a1



not modelled 5.4 19
Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD

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