Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3641c_(fic)_4080104_4080739
DateFri Aug 9 18:20:32 BST 2019
Unique Job ID06c08dc3c57e2345
SequenceVPHPWDTGDH ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:54.955 Y:43.924 Z:40.919
Model (left) based on template c2vzaD_
Top template information
PDB header:cell adhesion
Chain: D: PDB Molecule:cell filamentation protein;
PDBTitle: type iv secretion system effector protein bepa
Confidence and coverage
Confidence:100.0% Coverage: 90%
190 residues ( 90% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2vzaD_
100.0 27
PDB header:cell adhesion
Chain: D: PDB Molecule:cell filamentation protein;
PDBTitle: type iv secretion system effector protein bepa
2c4npsA_
100.0 25
PDB header:cell adhesion
Chain: A: PDB Molecule:bartonella effector protein (bep) substrate of virb t4ss;
PDBTitle: crystal structure of bep1 protein (virb-translocated bartonella2 effector protein) from bartonella clarridgeiae
3c4m16A_
100.0 26
PDB header:cell adhesion
Chain: A: PDB Molecule:bartonella effector protein (bep) substrate of virb t4ss;
PDBTitle: crystal structure of the n-terminal fic domain of bartonella effector2 protein (bep); substrate of virb t4ss (virb-translocated bep effector3 protein) from bartonella sp. ar 15-3
4c4lu4A_
100.0 26
PDB header:transferase
Chain: A: PDB Molecule:putative cell filamentation protein;
PDBTitle: crystal structure of the n-terminal fic domain of a putative cell2 filamentation protein (virb-translocated bep effector protein) from3 bartonella quintana
5c4xi8B_
100.0 22
PDB header:protein binding
Chain: B: PDB Molecule:bartonella effector protein (bep) substrate of virb t4ss;
PDBTitle: crystal structure of the fic domain of bep5 protein (virb-translocated2 bartonella effector protein) from bartonella clarridgeiae
6c4py3B_
100.0 23
PDB header:protein binding
Chain: B: PDB Molecule:bartonella effector protein (bep) substrate of virb t4ss;
PDBTitle: crystal structure of the n-terminal fic domain of bep8 protein (virb-2 translocated bartonella effector protein) from bartonella sp. 1-1c
7c3shgA_
100.0 28
PDB header:transferase/protein binding
Chain: A: PDB Molecule:vbht;
PDBTitle: vbht fic protein from bartonella schoenbuchensis in complex with vbha2 antitoxin
8c5jffC_
100.0 30
PDB header:transferase
Chain: C: PDB Molecule:probable adenosine monophosphate-protein transferase fic;
PDBTitle: e. coli ecfict mutant g55r in complex with ecfica
9c5nwfB_
100.0 27
PDB header:toxin
Chain: B: PDB Molecule:fic family protein;
PDBTitle: enterococcus faecalis fic protein (h111a).
10c2f6sA_
100.0 26
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:cell filamentation protein, putative;
PDBTitle: structure of cell filamentation protein (fic) from helicobacter pylori
11d2f6sa1
100.0 25
Fold:Fic-like
Superfamily:Fic-like
Family:Fic-like
12d2g03a1
100.0 25
Fold:Fic-like
Superfamily:Fic-like
Family:Fic-like
13c4u0zH_
100.0 17
PDB header:transferase
Chain: H: PDB Molecule:adenosine monophosphate-protein transferase ficd;
PDBTitle: eukaryotic fic domain containing protein with bound apcpp
14c3cucB_
99.9 14
PDB header:signaling protein
Chain: B: PDB Molecule:protein of unknown function with a fic domain;
PDBTitle: crystal structure of a fic domain containing signaling protein2 (bt_2513) from bacteroides thetaiotaomicron vpi-5482 at 2.71 a3 resolution
15c4rglA_
99.9 20
PDB header:dna binding protein
Chain: A: PDB Molecule:filamentation induced by camp protein fic;
PDBTitle: crystal structure of a fic family protein (dde_2494) from2 desulfovibrio desulfuricans g20 at 2.70 a resolution
16c5jj6A_
99.9 17
PDB header:transferase
Chain: A: PDB Molecule:adenosine monophosphate-protein transferase ficd homolog;
PDBTitle: fic-1 (aa134 - 508) from c. elegans
17c3eqxB_
99.9 13
PDB header:dna binding protein
Chain: B: PDB Molecule:fic domain containing transcriptional regulator;
PDBTitle: crystal structure of a fic family protein (so_4266) from shewanella2 oneidensis at 1.6 a resolution
18c4x2eA_
99.9 16
PDB header:transferase
Chain: A: PDB Molecule:fic family protein putative filamentation induced by camp
PDBTitle: clostridium difficile wild type fic protein
19c3n3vA_
99.9 17
PDB header:transferase
Chain: A: PDB Molecule:adenosine monophosphate-protein transferase ibpa;
PDBTitle: crystal structure of ibpafic2-h3717a in complex with adenylylated2 cdc42
20c3dd7A_
99.0 16
PDB header:ribosome inhibitor
Chain: A: PDB Molecule:death on curing protein;
PDBTitle: structure of doch66y in complex with the c-terminal domain of phd
21c3letB_
not modelled 98.3 17
PDB header:transferase
Chain: B: PDB Molecule:adenosine monophosphate-protein transferase vops;
PDBTitle: crystal structure of fic domain containing ampylator, vops
22d1s0pa_
not modelled 42.4 13
Fold:N-terminal domain of adenylylcyclase associated protein, CAP
Superfamily:N-terminal domain of adenylylcyclase associated protein, CAP
Family:N-terminal domain of adenylylcyclase associated protein, CAP
23c3n0aA_
not modelled 40.3 10
PDB header:hydrolase
Chain: A: PDB Molecule:tyrosine-protein phosphatase auxilin;
PDBTitle: crystal structure of auxilin (40-400)
24d3etja2
not modelled 40.3 39
Fold:PreATP-grasp domain
Superfamily:PreATP-grasp domain
Family:BC N-terminal domain-like
25c2c46B_
not modelled 37.1 9
PDB header:transferase
Chain: B: PDB Molecule:mrna capping enzyme;
PDBTitle: crystal structure of the human rna guanylyltransferase and 5'-2 phosphatase
26c3awfC_
not modelled 34.4 14
PDB header:hydrolase, membrane protein
Chain: C: PDB Molecule:voltage-sensor containing phosphatase;
PDBTitle: crystal structure of pten-like domain of ci-vsp (236-576)
27c2imgA_
not modelled 30.6 29
PDB header:hydrolase
Chain: A: PDB Molecule:dual specificity protein phosphatase 23;
PDBTitle: crystal structure of dual specificity protein phosphatase2 23 from homo sapiens in complex with ligand malate ion
28c3rgqA_
not modelled 29.3 18
PDB header:hydrolase
Chain: A: PDB Molecule:protein-tyrosine phosphatase mitochondrial 1;
PDBTitle: crystal structure of ptpmt1 in complex with pi(5)p
29d1yl7a1
not modelled 28.7 14
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
30c2ee7A_
not modelled 28.5 7
PDB header:structural protein
Chain: A: PDB Molecule:sperm flagellar protein 1;
PDBTitle: solution structure of the ch domain from human sperm2 flagellar protein 1
31c1yn9B_
not modelled 28.3 17
PDB header:hydrolase
Chain: B: PDB Molecule:polynucleotide 5'-phosphatase;
PDBTitle: crystal structure of baculovirus rna 5'-phosphatase2 complexed with phosphate
32d1ohea2
not modelled 27.2 13
Fold:(Phosphotyrosine protein) phosphatases II
Superfamily:(Phosphotyrosine protein) phosphatases II
Family:Dual specificity phosphatase-like
33c1d5rA_
not modelled 25.2 17
PDB header:hydrolase
Chain: A: PDB Molecule:phosphoinositide phosphatase pten;
PDBTitle: crystal structure of the pten tumor suppressor
34d1mkpa_
not modelled 24.8 17
Fold:(Phosphotyrosine protein) phosphatases II
Superfamily:(Phosphotyrosine protein) phosphatases II
Family:Dual specificity phosphatase-like
35c4nyhB_
not modelled 24.5 21
PDB header:hydrolase
Chain: B: PDB Molecule:rna/rnp complex-1-interacting phosphatase;
PDBTitle: orthorhombic crystal form of pir1 dual specificity phosphatase core
36c2lcyA_
not modelled 24.0 41
PDB header:viral protein
Chain: A: PDB Molecule:virion spike glycoprotein;
PDBTitle: nmr structure of the complete internal fusion loop from ebolavirus gp22 at ph 5.5
37c6i28A_
not modelled 22.7 15
PDB header:viral protein
Chain: A: PDB Molecule:orf98 ptp-2;
PDBTitle: crystal structure of cydia pomonella ptp-2 phosphatase
38c3s4eA_
not modelled 22.3 13
PDB header:hydrolase
Chain: A: PDB Molecule:dual specificity protein phosphatase 19;
PDBTitle: crystal structrue of a novel mitogen-activated protein kinase2 phosphatase, skrp1
39c2htfA_
not modelled 22.0 35
PDB header:transferase
Chain: A: PDB Molecule:dna polymerase mu;
PDBTitle: the solution structure of the brct domain from human2 polymerase reveals homology with the tdt brct domain
40c1zzwA_
not modelled 21.7 17
PDB header:hydrolase
Chain: A: PDB Molecule:dual specificity protein phosphatase 10;
PDBTitle: crystal structure of catalytic domain of human map kinase2 phosphatase 5
41c2wgpA_
not modelled 20.8 22
PDB header:hydrolase
Chain: A: PDB Molecule:dual specificity protein phosphatase 14;
PDBTitle: crystal structure of human dual specificity phosphatase 14
42c2y96A_
not modelled 20.2 21
PDB header:hydrolase
Chain: A: PDB Molecule:dual specificity phosphatase dupd1;
PDBTitle: structure of human dual-specificity phosphatase 27
43c2gwoC_
not modelled 19.8 21
PDB header:hydrolase
Chain: C: PDB Molecule:dual specificity protein phosphatase 13;
PDBTitle: crystal structure of tmdp
44c2i6oA_
not modelled 19.3 23
PDB header:hydrolase
Chain: A: PDB Molecule:sulfolobus solfataricus protein tyrosine
PDBTitle: crystal structure of the complex of the archaeal sulfolobus2 ptp-fold phosphatase with phosphopeptides n-g-(p)y-k-n
45c2nt2C_
not modelled 19.0 29
PDB header:hydrolase
Chain: C: PDB Molecule:protein phosphatase slingshot homolog 2;
PDBTitle: crystal structure of slingshot phosphatase 2
46c2e0tA_
not modelled 18.4 22
PDB header:hydrolase
Chain: A: PDB Molecule:dual specificity phosphatase 26;
PDBTitle: crystal structure of catalytic domain of dual specificity phosphatase2 26, ms0830 from homo sapiens
47d1s2xa_
not modelled 18.1 21
Fold:STAT-like
Superfamily:Cag-Z
Family:Cag-Z
48c1s2xA_
not modelled 18.1 21
PDB header:unknown function
Chain: A: PDB Molecule:cag-z;
PDBTitle: crystal structure of cag-z from helicobacter pylori
49c3emuA_
not modelled 17.9 9
PDB header:hydrolase
Chain: A: PDB Molecule:leucine rich repeat and phosphatase domain containing
PDBTitle: crystal structure of a leucine rich repeat and phosphatase domain2 containing protein from entamoeba histolytica
50c1wrmA_
not modelled 17.9 17
PDB header:hydrolase
Chain: A: PDB Molecule:dual specificity phosphatase 22;
PDBTitle: crystal structure of jsp-1
51c1yl7F_
not modelled 17.8 14
PDB header:oxidoreductase
Chain: F: PDB Molecule:dihydrodipicolinate reductase;
PDBTitle: the crystal structure of mycobacterium tuberculosis2 dihydrodipicolinate reductase (rv2773c) in complex with nadh (crystal3 form c)
52d1diha1
not modelled 17.7 33
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
53c4ki9A_
not modelled 17.6 17
PDB header:hydrolase
Chain: A: PDB Molecule:dual specificity protein phosphatase 12;
PDBTitle: crystal structure of the catalytic domain of human dusp12 at 2.0 a2 resolution
54c5jnmA_
not modelled 17.6 21
PDB header:oxidoreductase
Chain: A: PDB Molecule:mannitol-1-phosphate 5-dehydrogenase;
PDBTitle: crystal structure of mtld from staphylococcus aureus at 1.7-angstrom2 resolution
55c2r0bA_
not modelled 17.5 17
PDB header:hydrolase
Chain: A: PDB Molecule:serine/threonine/tyrosine-interacting protein;
PDBTitle: crystal structure of human tyrosine phosphatase-like2 serine/threonine/tyrosine-interacting protein
56c2m3vA_
not modelled 16.8 18
PDB header:hydrolase
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: solution structure of tyrosine phosphatase related to biofilm2 formation a (tpba) from pseudomonas aeruginosa
57c2oudA_
not modelled 16.1 17
PDB header:hydrolase
Chain: A: PDB Molecule:dual specificity protein phosphatase 10;
PDBTitle: crystal structure of the catalytic domain of human mkp5
58c5kt0A_
not modelled 15.8 24
PDB header:oxidoreductase
Chain: A: PDB Molecule:4-hydroxy-tetrahydrodipicolinate reductase;
PDBTitle: dihydrodipicolinate reductase from the industrial and evolutionarily2 important cyanobacteria anabaena variabilis.
59c4kyrA_
not modelled 15.4 18
PDB header:hydrolase, sugar binding protein
Chain: A: PDB Molecule:phosphoglucan phosphatase lsf2, chloroplastic;
PDBTitle: structure of a product bound plant phosphatase
60c3ijpA_
not modelled 15.3 33
PDB header:oxidoreductase
Chain: A: PDB Molecule:dihydrodipicolinate reductase;
PDBTitle: crystal structure of dihydrodipicolinate reductase from bartonella2 henselae at 2.0a resolution
61d1u8fo1
not modelled 14.9 18
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
62c4r30C_
not modelled 14.8 33
PDB header:hydrolase
Chain: C: PDB Molecule:laforin;
PDBTitle: structure of human laforin dual specificity phosphatase domain
63c2g6zB_
not modelled 14.7 22
PDB header:hydrolase
Chain: B: PDB Molecule:dual specificity protein phosphatase 5;
PDBTitle: crystal structure of human dusp5
64c4iqzD_
not modelled 14.4 31
PDB header:unknown function
Chain: D: PDB Molecule:dna-directed rna polymerase subunit beta';
PDBTitle: the crystal structure of a large insert in rna polymerase (rpoc)2 subunit from e. coli
65d1vm6a3
not modelled 14.4 40
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
66d1j0xo1
not modelled 14.3 18
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
67d1i9sa_
not modelled 14.2 13
Fold:(Phosphotyrosine protein) phosphatases II
Superfamily:(Phosphotyrosine protein) phosphatases II
Family:Dual specificity phosphatase-like
68c4jmkA_
not modelled 14.0 21
PDB header:hydrolase
Chain: A: PDB Molecule:dual specificity protein phosphatase 8;
PDBTitle: structure of dusp8
69c2aucC_
not modelled 14.0 7
PDB header:membrane protein
Chain: C: PDB Molecule:myosin a tail interacting protein;
PDBTitle: structure of the plasmodium mtip-myoa complex, a key component of the2 parasite invasion motor
70d1hdgo1
not modelled 13.9 14
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
71d2b5id2
not modelled 13.6 33
Fold:Complement control module/SCR domain
Superfamily:Complement control module/SCR domain
Family:Complement control module/SCR domain
72c2hcmA_
not modelled 13.6 30
PDB header:hydrolase
Chain: A: PDB Molecule:dual specificity protein phosphatase;
PDBTitle: crystal structure of mouse putative dual specificity phosphatase2 complexed with zinc tungstate, new york structural genomics3 consortium
73c5xjvA_
not modelled 13.5 21
PDB header:hydrolase
Chain: A: PDB Molecule:dual specificity protein phosphatase 13 isoform a;
PDBTitle: two intermediate states of conformation switch in dual specificity2 phosphatase 13a
74d1ggaa1
not modelled 13.4 26
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
75d1yq2a2
not modelled 13.4 17
Fold:Immunoglobulin-like beta-sandwich
Superfamily:beta-Galactosidase/glucuronidase domain
Family:beta-Galactosidase/glucuronidase domain
76c2vfwB_
not modelled 13.1 44
PDB header:transferase
Chain: B: PDB Molecule:short-chain z-isoprenyl diphosphate synthetase;
PDBTitle: rv1086 native
77c3ihtB_
not modelled 13.1 80
PDB header:transferase
Chain: B: PDB Molecule:s-adenosyl-l-methionine methyl transferase;
PDBTitle: crystal structure of s-adenosyl-l-methionine methyl transferase2 (yp_165822.1) from silicibacter pomeroyi dss-3 at 1.80 a resolution
78d1d5ra2
not modelled 13.1 24
Fold:(Phosphotyrosine protein) phosphatases II
Superfamily:(Phosphotyrosine protein) phosphatases II
Family:Dual specificity phosphatase-like
79c1yz4A_
not modelled 13.0 25
PDB header:hydrolase
Chain: A: PDB Molecule:dual specificity phosphatase-like 15 isoform a;
PDBTitle: crystal structure of dusp15
80d1i32a1
not modelled 13.0 22
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
81c5wolA_
not modelled 12.9 24
PDB header:oxidoreductase
Chain: A: PDB Molecule:4-hydroxy-tetrahydrodipicolinate reductase;
PDBTitle: crystal structure of dihydrodipicolinate reductase dapb from coxiella2 burnetii
82c4hd5A_
not modelled 12.9 0
PDB header:hydrolase
Chain: A: PDB Molecule:polysaccharide deacetylase;
PDBTitle: crystal structure of bc0361, a polysaccharide deacetylase from2 bacillus cereus
83d1vpda1
not modelled 12.8 13
Fold:6-phosphogluconate dehydrogenase C-terminal domain-like
Superfamily:6-phosphogluconate dehydrogenase C-terminal domain-like
Family:Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain
84d3gpdg1
not modelled 12.6 18
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
85d1m3ga_
not modelled 12.5 26
Fold:(Phosphotyrosine protein) phosphatases II
Superfamily:(Phosphotyrosine protein) phosphatases II
Family:Dual specificity phosphatase-like
86c1yx7A_
not modelled 12.4 12
PDB header:metal binding protein
Chain: A: PDB Molecule:calsensin;
PDBTitle: nmr structure of calsensin, energy minimized average2 structure.
87c6dzpg_
not modelled 12.0 57
PDB header:ribosome
Chain: G: PDB Molecule:50s ribosomal protein l6;
PDBTitle: cryo-em structure of mycobacterium smegmatis c(minus) 50s ribosomal2 subunit
88c5eesA_
not modelled 12.0 19
PDB header:oxidoreductase
Chain: A: PDB Molecule:4-hydroxy-tetrahydrodipicolinate reductase;
PDBTitle: crystal strcuture of dapb in complex with nadp+ from corynebacterium2 glutamicum
89c2vg2C_
not modelled 11.9 50
PDB header:transferase
Chain: C: PDB Molecule:undecaprenyl pyrophosphate synthetase;
PDBTitle: rv2361 with ipp
90c1drwA_
not modelled 11.8 33
PDB header:oxidoreductase
Chain: A: PDB Molecule:dihydrodipicolinate reductase;
PDBTitle: escherichia coli dhpr/nhdh complex
91c3h2zA_
not modelled 11.8 28
PDB header:oxidoreductase
Chain: A: PDB Molecule:mannitol-1-phosphate 5-dehydrogenase;
PDBTitle: the crystal structure of mannitol-1-phosphate dehydrogenase from2 shigella flexneri
92d1vhra_
not modelled 11.4 26
Fold:(Phosphotyrosine protein) phosphatases II
Superfamily:(Phosphotyrosine protein) phosphatases II
Family:Dual specificity phosphatase-like
93d1k3ta1
not modelled 11.3 26
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
94d2cvza1
not modelled 11.2 9
Fold:6-phosphogluconate dehydrogenase C-terminal domain-like
Superfamily:6-phosphogluconate dehydrogenase C-terminal domain-like
Family:Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain
95c5xw4A_
not modelled 10.7 25
PDB header:cell cycle
Chain: A: PDB Molecule:tyrosine-protein phosphatase cdc14;
PDBTitle: crystal structure of budding yeast cdc14p (wild type) in the apo state
96c2j034_
not modelled 10.7 56
PDB header:ribosome
Chain: 4: PDB Molecule:50s ribosomal protein l31;
PDBTitle: structure of the thermus thermophilus 70s ribosome2 complexed with mrna, trna and paromomycin (part 4 of 4).3 this file contains the 50s subunit from molecule ii.
97d2j0141
not modelled 10.7 56
Fold:L28p-like
Superfamily:L28p-like
Family:Ribosomal protein L31p
98c4q2uM_
not modelled 10.4 11
PDB header:toxin/toxin repressor
Chain: M: PDB Molecule:antitoxin dinj;
PDBTitle: crystal structure of the e. coli dinj-yafq toxin-antitoxin complex
99c5xk9F_
not modelled 10.4 25
PDB header:transferase
Chain: F: PDB Molecule:undecaprenyl diphosphate synthase;
PDBTitle: crystal structure of isosesquilavandulyl diphosphate synthase from2 streptomyces sp. strain cnh-189 in complex with gspp and dmapp

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