Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3652_(PE_PGRS60)_4093811_4094125
DateFri Aug 9 18:20:34 BST 2019
Unique Job IDab8ae3d8df7a9cfb
SequenceMSYVIAAPEA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:32.690 Y:18.053 Z:58.650
Model (left) based on template c2g38A_
Top template information
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:pe family protein;
PDBTitle: a pe/ppe protein complex from mycobacterium tuberculosis
Confidence and coverage
Confidence: 99.8% Coverage: 55%
57 residues ( 55% of your sequence) have been modelled with 99.8% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
3D viewing
Interactive 3D view in JSmol
For other options to view your downloaded structure offline see the FAQ

Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2g38A_



99.8 35
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:pe family protein;
PDBTitle: a pe/ppe protein complex from mycobacterium tuberculosis
2d2g38a1



99.8 35
Fold:Ferritin-like
Superfamily:PE/PPE dimer-like
Family:PE
3c5xfsA_



99.8 45
PDB header:protein transport
Chain: A: PDB Molecule:pe family protein pe8;
PDBTitle: crystal structure of pe8-ppe15 in complex with espg5 from m.2 tuberculosis
4c2knpA_



41.5 56
PDB header:unknown function
Chain: A: PDB Molecule:mcocc-1;
PDBTitle: isolation and characterization of peptides from momordica2 cochinchinensis seeds.
5c4uvkA_



21.0 19
PDB header:cell cycle
Chain: A: PDB Molecule:zyro0d15994p;
PDBTitle: cohesin subunit scc3 from z. rouxii, 88-1035
6c2kukA_



15.8 67
PDB header:antiviral protein
Chain: A: PDB Molecule:leaf cyclotide 2;
PDBTitle: solution structure of vhl-2
7d1v29a_



15.8 58
Fold:Nitrile hydratase alpha chain
Superfamily:Nitrile hydratase alpha chain
Family:Nitrile hydratase alpha chain
8c5sxpG_



15.5 78
PDB header:signaling protein/ligase
Chain: G: PDB Molecule:e3 ubiquitin-protein ligase itchy homolog;
PDBTitle: structural basis for the interaction between itch prr and beta-pix
9d1w1oa2



14.9 24
Fold:FAD-binding/transporter-associated domain-like
Superfamily:FAD-binding/transporter-associated domain-like
Family:FAD-linked oxidases, N-terminal domain
10c4pjwA_



14.9 29
PDB header:cell cycle
Chain: A: PDB Molecule:cohesin subunit sa-2;
PDBTitle: crystal structure of human stromal antigen 2 (sa2) in complex with2 sister chromatid cohesion protein 1 (scc1), with bound mes
11c1wlpA_



13.2 78
PDB header:oxidoreductase/signaling protein
Chain: A: PDB Molecule:cytochrome b-245 light chain;
PDBTitle: solution structure of the p22phox-p47phox complex
12c6h8qA_



13.0 19
PDB header:cell cycle
Chain: A: PDB Molecule:cohesin subunit scc3;
PDBTitle: structural basis for scc3-dependent cohesin recruitment to chromatin
13c3gvmA_



11.2 22
PDB header:viral protein
Chain: A: PDB Molecule:putative uncharacterized protein sag1039;
PDBTitle: structure of the homodimeric wxg-100 family protein from streptococcus2 agalactiae
14c6o58H_



10.8 33
PDB header:transport protein
Chain: H: PDB Molecule:essential mcu regulator, mitochondrial;
PDBTitle: human mcu-emre complex, dimer of channel
15c6o58P_



10.8 33
PDB header:transport protein
Chain: P: PDB Molecule:essential mcu regulator, mitochondrial;
PDBTitle: human mcu-emre complex, dimer of channel
16c5yixB_



10.6 38
PDB header:dna binding protein
Chain: B: PDB Molecule:cell cycle regulatory protein gcra;
PDBTitle: caulobacter crescentus gcra sigma-interacting domain (sid) in complex2 with domain 2 of sigma 70
17d1f0la3



10.6 33
Fold:Toxins' membrane translocation domains
Superfamily:Diphtheria toxin, middle domain
Family:Diphtheria toxin, middle domain
18c2mn1A_



9.5 50
PDB header:unknown function
Chain: A: PDB Molecule:kalata b1[w23ww];
PDBTitle: solution structure of kalata b1[w23ww]
19d1w0ba_



9.5 40
Fold:Spectrin repeat-like
Superfamily:Alpha-hemoglobin stabilizing protein AHSP
Family:Alpha-hemoglobin stabilizing protein AHSP
20d1mx3a2



9.4 31
Fold:Flavodoxin-like
Superfamily:Formate/glycerate dehydrogenase catalytic domain-like
Family:Formate/glycerate dehydrogenases, substrate-binding domain
21d1eaic_



not modelled 9.1 50
Fold:Serine protease inhibitors
Superfamily:Serine protease inhibitors
Family:ATI-like
22d1z8ua1



not modelled 9.0 42
Fold:Spectrin repeat-like
Superfamily:Alpha-hemoglobin stabilizing protein AHSP
Family:Alpha-hemoglobin stabilizing protein AHSP
23c5jhoA_



not modelled 8.3 13
PDB header:transport protein
Chain: A: PDB Molecule:electroneutral sodium bicarbonate exchanger 1;
PDBTitle: crystal structure of the regulatory domain of the sodium driven2 chloride bicarbonate exchanger.
24c4lwsB_



not modelled 6.3 11
PDB header:unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: esxa : esxb (semet) hetero-dimer from thermomonospora curvata
25c3bboG_



not modelled 5.6 40
PDB header:ribosome
Chain: G: PDB Molecule:ribosomal protein l4;
PDBTitle: homology model for the spinach chloroplast 50s subunit fitted to 9.4a2 cryo-em map of the 70s chlororibosome

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite