Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3678c_(-)_4118237_4118692
DateFri Aug 9 18:20:37 BST 2019
Unique Job ID766e0de4d5b2c260
SequenceMSAKARLGQL ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:31.647 Y:36.785 Z:42.276
Model (left) based on template d2otma1
Top template information
Fold:Bacillus chorismate mutase-like
Superfamily:YjgF-like
Family:YjgF/L-PSP
Confidence and coverage
Confidence:100.0% Coverage: 99%
149 residues ( 99% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d2otma1



100.0 34
Fold:Bacillus chorismate mutase-like
Superfamily:YjgF-like
Family:YjgF/L-PSP
2c3d01G_



100.0 51
PDB header:structural genomics, unknown function
Chain: G: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of the protein atu1372 with unknown function from2 agrobacterium tumefaciens
3c3k0tA_



100.0 26
PDB header:sugar binding protein
Chain: A: PDB Molecule:endoribonuclease l-psp, putative;
PDBTitle: crystal structure of pspto -psp protein in complex with d-beta-glucose2 from pseudomonas syringae pv. tomato str. dc3000
4c5v4dE_



100.0 25
PDB header:structural genomics, unknown function
Chain: E: PDB Molecule:putative translational inhibitor protein;
PDBTitle: crystal structure of the protein of unknown function of the conserved2 rid protein family yyfa from yersinia pestis
5c3l7qD_



100.0 30
PDB header:translation
Chain: D: PDB Molecule:putative translation initiation inhibitor, aldr regulator-
PDBTitle: crystal structure of aldr from streptococcus mutans
6d1nq3a_



100.0 25
Fold:Bacillus chorismate mutase-like
Superfamily:YjgF-like
Family:YjgF/L-PSP
7c3r0pB_



100.0 23
PDB header:hydrolase
Chain: B: PDB Molecule:l-psp putative endoribonuclease;
PDBTitle: crystal structure of l-psp putative endoribonuclease from uncultured2 organism
8d1onia_



100.0 21
Fold:Bacillus chorismate mutase-like
Superfamily:YjgF-like
Family:YjgF/L-PSP
9d2cvla1



100.0 28
Fold:Bacillus chorismate mutase-like
Superfamily:YjgF-like
Family:YjgF/L-PSP
10c5yu2D_



100.0 25
PDB header:gene regulation
Chain: D: PDB Molecule:translation initiation inhibitor homologue;
PDBTitle: structure of ribonuclease yabj
11d1qaha_



100.0 24
Fold:Bacillus chorismate mutase-like
Superfamily:YjgF-like
Family:YjgF/L-PSP
12d2b33a1



100.0 26
Fold:Bacillus chorismate mutase-like
Superfamily:YjgF-like
Family:YjgF/L-PSP
13c1xrgB_



100.0 28
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:putative translation initiation inhibitor, yjgf family;
PDBTitle: conserved hypothetical protein from clostridium thermocellum cth-2968
14d1j7ha_



100.0 28
Fold:Bacillus chorismate mutase-like
Superfamily:YjgF-like
Family:YjgF/L-PSP
15c3m4sC_



100.0 27
PDB header:unknown function
Chain: C: PDB Molecule:putative endoribonuclease l-psp;
PDBTitle: crystal structure of a putative endoribonuclease l-psp from entamoeba2 histolytica, orthorhombic form
16d1qd9a_



100.0 30
Fold:Bacillus chorismate mutase-like
Superfamily:YjgF-like
Family:YjgF/L-PSP
17c3quwA_



100.0 30
PDB header:protein binding
Chain: A: PDB Molecule:protein mmf1;
PDBTitle: crystal structure of yeast mmf1
18d1x25a1



100.0 29
Fold:Bacillus chorismate mutase-like
Superfamily:YjgF-like
Family:YjgF/L-PSP
19d1jd1a_



100.0 31
Fold:Bacillus chorismate mutase-like
Superfamily:YjgF-like
Family:YjgF/L-PSP
20d1xrga_



100.0 28
Fold:Bacillus chorismate mutase-like
Superfamily:YjgF-like
Family:YjgF/L-PSP
21c3lmeE_



not modelled 100.0 17
PDB header:translation
Chain: E: PDB Molecule:possible translation initiation inhibitor;
PDBTitle: structure of probable translation initiation inhibitor from (rpa2473)2 from rhodopseudomonas palustris
22c3v4dC_



not modelled 100.0 20
PDB header:oxidoreductase
Chain: C: PDB Molecule:aminoacrylate peracid reductase rutc;
PDBTitle: crystal structure of rutc protein a member of the yjgf family from2 e.coli
23c2dyyG_



not modelled 100.0 29
PDB header:structural genomics, unknown function
Chain: G: PDB Molecule:upf0076 protein ph0854;
PDBTitle: crystal structure of putative translation initiation2 inhibitor ph0854 from pyrococcus horikoshii
24d2cwja1



not modelled 100.0 29
Fold:Bacillus chorismate mutase-like
Superfamily:YjgF-like
Family:YjgF/L-PSP
25d1qu9a_



not modelled 100.0 27
Fold:Bacillus chorismate mutase-like
Superfamily:YjgF-like
Family:YjgF/L-PSP
26c2ig8C_



not modelled 100.0 19
PDB header:structural genomics, unknown function
Chain: C: PDB Molecule:hypothetical protein pa3499;
PDBTitle: crystal structure of a protein of unknown function pa3499 from2 pseudomonas aeruginosa
27d1pf5a_



not modelled 100.0 22
Fold:Bacillus chorismate mutase-like
Superfamily:YjgF-like
Family:YjgF/L-PSP
28c6izhE_



not modelled 100.0 18
PDB header:hydrolase
Chain: E: PDB Molecule:2-aminomuconate deaminase;
PDBTitle: crystal structure of deaminase amne from pseudomonas sp. ap-3
29c5hp8C_



not modelled 100.0 27
PDB header:hydrolase
Chain: C: PDB Molecule:reactive intermediate deaminase a, chloroplastic;
PDBTitle: crystal structures of rida in complex with pyruvate
30c3gtzA_



not modelled 100.0 14
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative translation initiation inhibitor;
PDBTitle: crystal structure of a putative translation initiation inhibitor from2 salmonella typhimurium
31c5v4fA_



not modelled 100.0 18
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative translational inhibitor protein;
PDBTitle: crystal structure of the protein of unknown function of the conserved2 rid protein family yyfb from yersinia pestis
32c3i7tA_



not modelled 100.0 25
PDB header:unknown function
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of rv2704, a member of highly conserved2 yjgf/yer057c/uk114 family, from mycobacterium tuberculosis
33c3kjjL_



not modelled 100.0 14
PDB header:unknown function
Chain: L: PDB Molecule:nmb1025 protein;
PDBTitle: crystal structure of nmb1025, a member of yjgf protein family, from2 neisseria meningitidis (hexagonal crystal form)
34d2ewca1



not modelled 100.0 12
Fold:Bacillus chorismate mutase-like
Superfamily:YjgF-like
Family:YjgF/L-PSP
35c3k12F_



not modelled 100.0 20
PDB header:structural genomics, unknown function
Chain: F: PDB Molecule:uncharacterized protein a6v7t0;
PDBTitle: crystal structure of an uncharacterized protein a6v7t0 from2 pseudomonas aeruginosa
36c3i3fB_



not modelled 100.0 16
PDB header:unknown function
Chain: B: PDB Molecule:hypothetical protein;
PDBTitle: hypothetical protein from giardia lamblia gl50803_14299
37c3lybC_



not modelled 99.9 23
PDB header:hydrolase
Chain: C: PDB Molecule:putative endoribonuclease;
PDBTitle: structure of putative endoribonuclease(kp1_3112) from klebsiella2 pneumoniae
38c4bpsA_



not modelled 99.9 15
PDB header:hydrolase
Chain: A: PDB Molecule:fkbo;
PDBTitle: crystal structure of chorismatase at 1.08 angstrom resolution.
39c5a3kA_



not modelled 99.9 19
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative pteridine-dependent dioxygenase;
PDBTitle: chorismatase mechanisms reveal fundamentally different types of2 reaction in a single conserved protein fold
40c2uvkB_



not modelled 50.8 24
PDB header:unknown function
Chain: B: PDB Molecule:yjht;
PDBTitle: structure of yjht
41c2iyjA_



not modelled 47.2 15
PDB header:isomerase
Chain: A: PDB Molecule:thiol disulfide interchange protein dsbc;
PDBTitle: crystal structure of the n-terminal dimer domain of e.coli2 dsbc
42c5yy8A_



not modelled 43.3 17
PDB header:protein binding
Chain: A: PDB Molecule:influenza virus ns1a-binding protein;
PDBTitle: crystal structure of the kelch domain of human ns1-bp
43d1t3ba2



not modelled 40.5 16
Fold:Cystatin-like
Superfamily:DsbC/DsbG N-terminal domain-like
Family:DsbC/DsbG N-terminal domain-like
44d1eeja2



not modelled 26.4 17
Fold:Cystatin-like
Superfamily:DsbC/DsbG N-terminal domain-like
Family:DsbC/DsbG N-terminal domain-like
45c3pw1A_



not modelled 21.1 16
PDB header:oxidoreductase
Chain: A: PDB Molecule:phenylacetic acid degradation protein paaa;
PDBTitle: the phenylacetyl-coa monooxygenase paaac subcomplex with phenylacetyl-2 coa
46c1t3bA_



not modelled 19.6 20
PDB header:isomerase
Chain: A: PDB Molecule:thiol:disulfide interchange protein dsbc;
PDBTitle: x-ray structure of dsbc from haemophilus influenzae
47c3fqmA_



not modelled 11.5 38
PDB header:metal binding protein
Chain: A: PDB Molecule:non-structural protein 5a;
PDBTitle: crystal structure of a novel dimeric form of hcv ns5a domain i protein
48c1ox3A_



not modelled 9.1 20
PDB header:chaperone
Chain: A: PDB Molecule:fibritin;
PDBTitle: crystal structure of mini-fibritin
49c2dclB_



not modelled 9.1 16
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:hypothetical upf0166 protein ph1503;
PDBTitle: structure of ph1503 protein from pyrococcus horikoshii ot3
50c1jzdA_



not modelled 7.9 19
PDB header:oxidoreductase
Chain: A: PDB Molecule:thiol:disulfide interchange protein dsbc;
PDBTitle: dsbc-dsbdalpha complex
51c4htgA_



not modelled 7.9 15
PDB header:transferase/transferase inhibitor
Chain: A: PDB Molecule:porphobilinogen deaminase, chloroplastic;
PDBTitle: porphobilinogen deaminase from arabidopsis thaliana
52c4npbA_



not modelled 7.7 12
PDB header:isomerase
Chain: A: PDB Molecule:protein disulfide isomerase ii;
PDBTitle: the crystal structure of thiol:disulfide interchange protein dsbc from2 yersinia pestis co92
53d1gtka2



not modelled 7.2 13
Fold:dsRBD-like
Superfamily:Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
Family:Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
54d2fug31



not modelled 6.8 50
Fold:Double psi beta-barrel
Superfamily:ADC-like
Family:Formate dehydrogenase/DMSO reductase, C-terminal domain
55d1obba2



not modelled 6.7 31
Fold:LDH C-terminal domain-like
Superfamily:LDH C-terminal domain-like
Family:AglA-like glucosidase
56d1vjta2



not modelled 6.7 25
Fold:LDH C-terminal domain-like
Superfamily:LDH C-terminal domain-like
Family:AglA-like glucosidase
57d1r5pa_



not modelled 6.5 21
Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:KaiB-like
58c2j5uB_



not modelled 6.5 17
PDB header:cell shape regulation
Chain: B: PDB Molecule:mrec protein;
PDBTitle: mrec lysteria monocytogenes
59d1twfc2



not modelled 6.2 14
Fold:Insert subdomain of RNA polymerase alpha subunit
Superfamily:Insert subdomain of RNA polymerase alpha subunit
Family:Insert subdomain of RNA polymerase alpha subunit
60c4kunB_



not modelled 6.1 8
PDB header:unknown function
Chain: B: PDB Molecule:hypothetical protein lpp1115;
PDBTitle: crystal structure of legionella pneumophila lpp1115 / kaib
61c2xn4A_



not modelled 5.8 17
PDB header:structural protein
Chain: A: PDB Molecule:kelch-like protein 2;
PDBTitle: crystal structure of the kelch domain of human klhl2 (mayven)
62d1up7a2



not modelled 5.3 31
Fold:LDH C-terminal domain-like
Superfamily:LDH C-terminal domain-like
Family:AglA-like glucosidase
63d1s6ya2



not modelled 5.3 19
Fold:LDH C-terminal domain-like
Superfamily:LDH C-terminal domain-like
Family:AglA-like glucosidase

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