Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3714c_(-)_4159109_4159999
DateFri Aug 9 18:20:41 BST 2019
Unique Job ID35a036d60b87fec0
SequenceMLISRMSVRS ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:39.343 Y:37.186 Z:36.978
Model (left) based on template c3r3pB_
Top template information
PDB header:hydrolase
Chain: B: PDB Molecule:mobile intron protein;
PDBTitle: homing endonuclease i-bth0305i catalytic domain
Confidence and coverage
Confidence: 99.7% Coverage: 31%
93 residues ( 31% of your sequence) have been modelled with 99.7% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
204 residues ( 69%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3r3pB_



99.7 19
PDB header:hydrolase
Chain: B: PDB Molecule:mobile intron protein;
PDBTitle: homing endonuclease i-bth0305i catalytic domain
2c3hrlA_



99.4 25
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:endonuclease-like protein;
PDBTitle: crystal structure of a putative endonuclease-like protein (ngo0050)2 from neisseria gonorrhoeae
3d1cw0a_



99.3 23
Fold:Restriction endonuclease-like
Superfamily:Restriction endonuclease-like
Family:Very short patch repair (VSR) endonuclease
4d1vsra_



98.1 24
Fold:Restriction endonuclease-like
Superfamily:Restriction endonuclease-like
Family:Very short patch repair (VSR) endonuclease
5c4oq2A_



96.2 16
PDB header:hydrolase
Chain: A: PDB Molecule:restriction endonuclease pvurts1 i;
PDBTitle: 5hmc specific restriction endonuclease pvurts1i
6c4parC_



96.2 21
PDB header:dna binding protein/dna
Chain: C: PDB Molecule:uncharacterized protein abasi;
PDBTitle: the 5-hydroxymethylcytosine-specific restriction enzyme abasi in a2 complex with product-like dna
7c6rdu2_



95.3 14
PDB header:proton transport
Chain: 2: PDB Molecule:asa-2: polytomella f-atp synthase associated subunit 2;
PDBTitle: cryo-em structure of polytomella f-atp synthase, rotary substate 1e,2 monomer-masked refinement
8d1zela2



90.7 19
Fold:Rv2827c C-terminal domain-like
Superfamily:Rv2827c C-terminal domain-like
Family:Rv2827c C-terminal domain-like
9c1zelA_



89.5 18
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein rv2827c;
PDBTitle: crystal structure of rv2827c protein from mycobacterium tuberculosis
10d2fcla1



54.1 27
Fold:Nucleotidyltransferase
Superfamily:Nucleotidyltransferase
Family:TM1012-like
11d1m0da_



32.9 16
Fold:Restriction endonuclease-like
Superfamily:Restriction endonuclease-like
Family:Endonuclease I (Holliday junction resolvase)
12c4gqzB_



15.5 16
PDB header:metal binding protein
Chain: B: PDB Molecule:putative periplasmic or exported protein;
PDBTitle: crystal structure of s.cuep
13c2m0nA_



12.2 46
PDB header:unknown function
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: solution structure of a duf3349 annotated protein from mycobacterium2 abscessus, mab_3403c. seattle structural genomics center for3 infectious disease target myaba.17112.a.a2
14c5vrvA_



11.6 17
PDB header:hydrolase,oxidoreductase
Chain: A: PDB Molecule:protein regulated by acid ph;
PDBTitle: 2.05 angstrom resolution crystal structure of c-terminal domain2 (duf2156) of putative lysylphosphatidylglycerol synthetase from3 agrobacterium fabrum.
15c2lkyA_



9.0 46
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: solution structure of msmeg_1053, the second duf3349 annotated protein2 in the genome of mycobacterium smegmatis, seattle structural genomics3 center for infectious disease target mysma.17112.b
16d1jg5a_



7.1 29
Fold:GTP cyclohydrolase I feedback regulatory protein, GFRP
Superfamily:GTP cyclohydrolase I feedback regulatory protein, GFRP
Family:GTP cyclohydrolase I feedback regulatory protein, GFRP
17d1tfea_



6.3 14
Fold:EF-Ts domain-like
Superfamily:Elongation factor Ts (EF-Ts), dimerisation domain
Family:Elongation factor Ts (EF-Ts), dimerisation domain
18c4p6iB_



6.0 18
PDB header:hydrolase
Chain: B: PDB Molecule:crispr-associated endoribonuclease cas2;
PDBTitle: crystal structure of the cas1-cas2 complex from escherichia coli
19c2vldA_



5.5 19
PDB header:hydrolase
Chain: A: PDB Molecule:endonuclease nucs;
PDBTitle: crystal structure of a repair endonuclease from pyrococcus abyssi
20d2csba2



5.3 42
Fold:SAM domain-like
Superfamily:RuvA domain 2-like
Family:Topoisomerase V repeat domain
21d1y5ea1



not modelled 5.2 20
Fold:Molybdenum cofactor biosynthesis proteins
Superfamily:Molybdenum cofactor biosynthesis proteins
Family:MogA-like
22d1jsma_



not modelled 5.0 22
Fold:Viral protein domain
Superfamily:Viral protein domain
Family:Influenza hemagglutinin headpiece

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