Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3721c_(dnaZX)_4165173_4166909
DateFri Aug 9 18:20:41 BST 2019
Unique Job IDde6e9c6a847828e3
SequenceVALYRKYRPA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:48.205 Y:54.924 Z:86.472
Model (left) based on template c1xxhB_
Top template information
PDB header:transferase
Chain: B: PDB Molecule:dna polymerase iii subunit gamma;
PDBTitle: atpgs bound e. coli clamp loader complex
Confidence and coverage
Confidence:100.0% Coverage: 63%
362 residues ( 63% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
3D viewing
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c1xxhB_
100.0 37
PDB header:transferase
Chain: B: PDB Molecule:dna polymerase iii subunit gamma;
PDBTitle: atpgs bound e. coli clamp loader complex
2c1jr3E_
100.0 24
PDB header:transferase
Chain: E: PDB Molecule:dna polymerase iii, delta' subunit;
PDBTitle: crystal structure of the processivity clamp loader gamma complex of e.2 coli dna polymerase iii
3c6genX_
100.0 22
PDB header:nuclear protein
Chain: X: PDB Molecule:ruvb-like protein 1;
PDBTitle: chromatin remodeller-nucleosome complex at 4.5 a resolution.
4c5oafB_
100.0 23
PDB header:gene regulation
Chain: B: PDB Molecule:ruvb-like 2;
PDBTitle: human rvb1/rvb2 heterohexamer in ino80 complex
5c1sxjC_
100.0 23
PDB header:replication
Chain: C: PDB Molecule:activator 1 40 kda subunit;
PDBTitle: crystal structure of the eukaryotic clamp loader (replication factor2 c, rfc) bound to the dna sliding clamp (proliferating cell nuclear3 antigen, pcna)
6c3u5zM_
100.0 21
PDB header:dna binding protein/dna
Chain: M: PDB Molecule:dna polymerase accessory protein 44;
PDBTitle: structure of t4 bacteriophage clamp loader bound to the t4 clamp,2 primer-template dna, and atp analog
7c1iqpF_
100.0 22
PDB header:replication
Chain: F: PDB Molecule:rfcs;
PDBTitle: crystal structure of the clamp loader small subunit from2 pyrococcus furiosus
8c3pvsA_
100.0 24
PDB header:recombination
Chain: A: PDB Molecule:replication-associated recombination protein a;
PDBTitle: structure and biochemical activities of escherichia coli mgsa
9c1sxjE_
100.0 18
PDB header:replication
Chain: E: PDB Molecule:activator 1 40 kda subunit;
PDBTitle: crystal structure of the eukaryotic clamp loader (replication factor2 c, rfc) bound to the dna sliding clamp (proliferating cell nuclear3 antigen, pcna)
10c2chvE_
100.0 23
PDB header:dna-binding protein
Chain: E: PDB Molecule:replication factor c small subunit;
PDBTitle: replication factor c adpnp complex
11c2c9oA_
100.0 20
PDB header:hydrolase
Chain: A: PDB Molecule:ruvb-like 1;
PDBTitle: 3d structure of the human ruvb-like helicase ruvbl1
12c1sxjB_
100.0 21
PDB header:replication
Chain: B: PDB Molecule:activator 1 37 kda subunit;
PDBTitle: crystal structure of the eukaryotic clamp loader (replication factor2 c, rfc) bound to the dna sliding clamp (proliferating cell nuclear3 antigen, pcna)
13c1sxjD_
100.0 19
PDB header:replication
Chain: D: PDB Molecule:activator 1 41 kda subunit;
PDBTitle: crystal structure of the eukaryotic clamp loader (replication factor2 c, rfc) bound to the dna sliding clamp (proliferating cell nuclear3 antigen, pcna)
14c4ww4A_
100.0 25
PDB header:hydrolase
Chain: A: PDB Molecule:ruvb-like 1;
PDBTitle: double-heterohexameric rings of full-length rvb1(adp)/rvb2(adp)
15d1njfa_
100.0 47
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
16c2gnoA_
100.0 19
PDB header:replication
Chain: A: PDB Molecule:dna polymerase iii, gamma subunit-related protein;
PDBTitle: crystal structure of a dna polymerase iii, gamma subunit-related2 protein (tm0771) from thermotoga maritima msb8 at 2.00 a resolution
17c3zh9B_
100.0 13
PDB header:hydrolase
Chain: B: PDB Molecule:delta;
PDBTitle: bacillus subtilis dna clamp loader delta protein (yqen)
18d2gnoa2
100.0 20
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
19c2chgB_
100.0 29
PDB header:dna-binding protein
Chain: B: PDB Molecule:replication factor c small subunit;
PDBTitle: replication factor c domains 1 and 2
20d1sxjb2
100.0 24
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
21c1sxjA_
not modelled 100.0 20
PDB header:replication
Chain: A: PDB Molecule:activator 1 95 kda subunit;
PDBTitle: crystal structure of the eukaryotic clamp loader (replication factor2 c, rfc) bound to the dna sliding clamp (proliferating cell nuclear3 antigen, pcna)
22d1sxjc2
not modelled 100.0 28
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
23c4ww4B_
not modelled 100.0 21
PDB header:hydrolase
Chain: B: PDB Molecule:ruvb-like 2;
PDBTitle: double-heterohexameric rings of full-length rvb1(adp)/rvb2(adp)
24d1iqpa2
not modelled 100.0 29
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
25d1sxje2
not modelled 100.0 21
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
26d1a5ta2
not modelled 100.0 28
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
27d1sxjd2
not modelled 100.0 28
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
28c1xxiF_
not modelled 100.0 15
PDB header:transferase
Chain: F: PDB Molecule:dna polymerase iii, delta subunit;
PDBTitle: adp bound e. coli clamp loader complex
29d1sxja2
not modelled 100.0 20
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
30d1ixsb2
not modelled 100.0 25
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
31d1in4a2
not modelled 100.0 24
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
32c6blbA_
not modelled 100.0 21
PDB header:hydrolase
Chain: A: PDB Molecule:holliday junction atp-dependent dna helicase ruvb;
PDBTitle: 1.88 angstrom resolution crystal structure holliday junction atp-2 dependent dna helicase (ruvb) from pseudomonas aeruginosa in complex3 with adp
33c3pfiB_
not modelled 100.0 22
PDB header:hydrolase
Chain: B: PDB Molecule:holliday junction atp-dependent dna helicase ruvb;
PDBTitle: 2.7 angstrom resolution crystal structure of a probable holliday2 junction dna helicase (ruvb) from campylobacter jejuni subsp. jejuni3 nctc 11168 in complex with adenosine-5'-diphosphate
34c1in8A_
not modelled 99.9 24
PDB header:dna binding protein
Chain: A: PDB Molecule:holliday junction dna helicase ruvb;
PDBTitle: thermotoga maritima ruvb t158v
35c2c9oC_
not modelled 99.9 17
PDB header:hydrolase
Chain: C: PDB Molecule:ruvb-like 1;
PDBTitle: 3d structure of the human ruvb-like helicase ruvbl1
36d1qvra2
not modelled 99.9 15
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
37c3bosA_
not modelled 99.9 19
PDB header:hydrolase regulator,dna binding protein
Chain: A: PDB Molecule:putative dna replication factor;
PDBTitle: crystal structure of a putative dna replication regulator hda2 (sama_1916) from shewanella amazonensis sb2b at 1.75 a resolution
38c6nyyC_
not modelled 99.9 18
PDB header:translocase
Chain: C: PDB Molecule:afg3-like protein 2;
PDBTitle: human m-aaa protease afg3l2, substrate-bound
39c3d8bB_
not modelled 99.9 16
PDB header:hydrolase
Chain: B: PDB Molecule:fidgetin-like protein 1;
PDBTitle: crystal structure of human fidgetin-like protein 1 in complex with adp
40c6qi8E_
not modelled 99.9 19
PDB header:chaperone
Chain: E: PDB Molecule:ruvb-like 2;
PDBTitle: truncated human r2tp complex, structure 3 (adp-filled)
41c3b9pA_
not modelled 99.9 18
PDB header:hydrolase
Chain: A: PDB Molecule:cg5977-pa, isoform a;
PDBTitle: spastin
42c2dhrC_
not modelled 99.9 21
PDB header:hydrolase
Chain: C: PDB Molecule:ftsh;
PDBTitle: whole cytosolic region of atp-dependent metalloprotease2 ftsh (g399l)
43c1hqcB_
not modelled 99.9 25
PDB header:hydrolase
Chain: B: PDB Molecule:ruvb;
PDBTitle: structure of ruvb from thermus thermophilus hb8
44c3vfdA_
not modelled 99.9 17
PDB header:hydrolase
Chain: A: PDB Molecule:spastin;
PDBTitle: human spastin aaa domain
45c2zamA_
not modelled 99.9 20
PDB header:protein transport
Chain: A: PDB Molecule:vacuolar protein sorting-associating protein 4b;
PDBTitle: crystal structure of mouse skd1/vps4b apo-form
46c4l16A_
not modelled 99.9 18
PDB header:hydrolase
Chain: A: PDB Molecule:fidgetin-like protein 1;
PDBTitle: crystal structure of figl-1 aaa domain in complex with adp
47c5g4gF_
not modelled 99.9 18
PDB header:hydrolase
Chain: F: PDB Molecule:vcp-like atpase;
PDBTitle: structure of the atpgs-bound vat complex
48c3uk6H_
not modelled 99.9 19
PDB header:hydrolase
Chain: H: PDB Molecule:ruvb-like 2;
PDBTitle: crystal structure of the tip48 (tip49b) hexamer
49c3h4mC_
not modelled 99.9 17
PDB header:hydrolase
Chain: C: PDB Molecule:proteasome-activating nucleotidase;
PDBTitle: aaa atpase domain of the proteasome- activating nucleotidase
50d1r6bx2
not modelled 99.9 14
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
51c2ce7B_
not modelled 99.9 21
PDB header:cell division protein
Chain: B: PDB Molecule:cell division protein ftsh;
PDBTitle: edta treated
52c6az0A_
not modelled 99.9 23
PDB header:hydrolase
Chain: A: PDB Molecule:mitochondrial inner membrane i-aaa protease supercomplex
PDBTitle: mitochondrial atpase protease yme1
53c5kneA_
not modelled 99.9 19
PDB header:chaperone
Chain: A: PDB Molecule:heat shock protein 104;
PDBTitle: cryoem reconstruction of hsp104 hexamer
54c4z8xC_
not modelled 99.9 25
PDB header:hydrolase
Chain: C: PDB Molecule:atp-dependent zinc metalloprotease ftsh;
PDBTitle: truncated ftsh from a. aeolicus
55c4lcbA_
not modelled 99.9 20
PDB header:protein transport
Chain: A: PDB Molecule:cell division protein cdvc, vps4;
PDBTitle: structure of vps4 homolog from acidianus hospitalis
56d1qvra3
not modelled 99.9 25
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
57c1xwiA_
not modelled 99.9 19
PDB header:protein transport
Chain: A: PDB Molecule:skd1 protein;
PDBTitle: crystal structure of vps4b
58d1g8pa_
not modelled 99.9 21
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
59c4xguB_
not modelled 99.9 14
PDB header:atp-binding protein
Chain: B: PDB Molecule:putative pachytene checkpoint protein 2;
PDBTitle: structure of c. elegans pch-2
60c5kzfJ_
not modelled 99.9 18
PDB header:hydrolase
Chain: J: PDB Molecule:proteasome-associated atpase;
PDBTitle: crystal structure of near full-length hexameric mycobacterium2 tuberculosis proteasomal atpase mpa in apo form
61c6b5cA_
not modelled 99.9 17
PDB header:cell cycle
Chain: A: PDB Molecule:katanin p60 atpase-containing subunit a-like 1;
PDBTitle: structural basis for katanin self-assembly
62c3eihB_
not modelled 99.9 19
PDB header:protein transport
Chain: B: PDB Molecule:vacuolar protein sorting-associated protein 4;
PDBTitle: crystal structure of s.cerevisiae vps4 in the presence of atpgammas
63d2ce7a2
not modelled 99.9 21
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
64c5wc0D_
not modelled 99.9 18
PDB header:motor protein
Chain: D: PDB Molecule:meiotic spindle formation protein mei-1;
PDBTitle: katanin hexamer in spiral conformation
65d1r6bx3
not modelled 99.9 21
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
66c2qz4A_
not modelled 99.9 16
PDB header:hydrolase
Chain: A: PDB Molecule:paraplegin;
PDBTitle: human paraplegin, aaa domain in complex with adp
67c3cf1C_
not modelled 99.9 21
PDB header:transport protein
Chain: C: PDB Molecule:transitional endoplasmic reticulum atpase;
PDBTitle: structure of p97/vcp in complex with adp/adp.alfx
68c5j1sA_
not modelled 99.9 16
PDB header:hydrolase
Chain: A: PDB Molecule:torsin-1a;
PDBTitle: torsina-lull1 complex, h. sapiens, bound to vhh-bs2
69c3uk6L_
not modelled 99.9 17
PDB header:hydrolase
Chain: L: PDB Molecule:ruvb-like 2;
PDBTitle: crystal structure of the tip48 (tip49b) hexamer
70c4b4tH_
not modelled 99.9 20
PDB header:hydrolase
Chain: H: PDB Molecule:26s protease regulatory subunit 7 homolog;
PDBTitle: near-atomic resolution structural model of the yeast 26s proteasome
71d1w5sa2
not modelled 99.9 16
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
72c6epcJ_
not modelled 99.9 17
PDB header:hydrolase
Chain: J: PDB Molecule:26s proteasome regulatory subunit 8;
PDBTitle: ground state 26s proteasome (gs2)
73c5e7pA_
not modelled 99.9 22
PDB header:hydrolase
Chain: A: PDB Molecule:cell division control protein cdc48;
PDBTitle: crystal structure of msmeg_0858 (uniprot a0qqs4), a aaa atpase.
74d1ofha_
not modelled 99.9 24
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
75c2z4rB_
not modelled 99.9 17
PDB header:dna binding protein
Chain: B: PDB Molecule:chromosomal replication initiator protein dnaa;
PDBTitle: crystal structure of domain iii from the thermotoga2 maritima replication initiation protein dnaa
76c6matE_
not modelled 99.9 21
PDB header:ribosomal protein
Chain: E: PDB Molecule:rix7 mutant;
PDBTitle: cryo-em structure of the essential ribosome assembly aaa-atpase rix7
77c1qvrB_
not modelled 99.9 26
PDB header:chaperone
Chain: B: PDB Molecule:clpb protein;
PDBTitle: crystal structure analysis of clpb
78c5ubvB_
not modelled 99.9 19
PDB header:hydrolase
Chain: B: PDB Molecule:atpase domain of i-aaa protease;
PDBTitle: atpase domain of i-aaa protease from myceliophthora thermophila
79c4b4tL_
not modelled 99.8 15
PDB header:hydrolase
Chain: L: PDB Molecule:26s protease subunit rpt4;
PDBTitle: near-atomic resolution structural model of the yeast 26s proteasome
80c6nyyA_
not modelled 99.8 17
PDB header:translocase
Chain: A: PDB Molecule:afg3-like protein 2;
PDBTitle: human m-aaa protease afg3l2, substrate-bound
81c6epdM_
not modelled 99.8 18
PDB header:hydrolase
Chain: M: PDB Molecule:26s proteasome regulatory subunit 6a;
PDBTitle: substrate processing state 26s proteasome (sps1)
82c5w0tA_
not modelled 99.8 18
PDB header:hydrolase
Chain: A: PDB Molecule:protein msp1;
PDBTitle: crystal structure of monomeric msp1 from s. cerevisiae
83c5vq9D_
not modelled 99.8 20
PDB header:protein binding
Chain: D: PDB Molecule:pachytene checkpoint protein 2 homolog;
PDBTitle: structure of human trip13, apo form
84c2r65A_
not modelled 99.8 20
PDB header:hydrolase
Chain: A: PDB Molecule:cell division protease ftsh homolog;
PDBTitle: crystal structure of helicobacter pylori atp dependent protease, ftsh2 adp complex
85c4b4tJ_
not modelled 99.8 19
PDB header:hydrolase
Chain: J: PDB Molecule:26s protease regulatory subunit 8 homolog;
PDBTitle: near-atomic resolution structural model of the yeast 26s proteasome
86c4b4tI_
not modelled 99.8 16
PDB header:hydrolase
Chain: I: PDB Molecule:26s protease regulatory subunit 4 homolog;
PDBTitle: near-atomic resolution structural model of the yeast 26s proteasome
87c3hu2C_
not modelled 99.8 18
PDB header:transport protein
Chain: C: PDB Molecule:transitional endoplasmic reticulum atpase;
PDBTitle: structure of p97 n-d1 r86a mutant in complex with atpgs
88d1um8a_
not modelled 99.8 26
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
89d1g41a_
not modelled 99.8 21
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
90c3pxiB_
not modelled 99.8 22
PDB header:protein binding
Chain: B: PDB Molecule:negative regulator of genetic competence clpc/mecb;
PDBTitle: structure of meca108:clpc
91d1jbka_
not modelled 99.8 18
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
92c5gjqL_
not modelled 99.8 22
PDB header:hydrolase
Chain: L: PDB Molecule:26s protease regulatory subunit 10b;
PDBTitle: structure of the human 26s proteasome bound to usp14-ubal
93c5d4wB_
not modelled 99.8 20
PDB header:chaperone
Chain: B: PDB Molecule:putative heat shock protein;
PDBTitle: crystal structure of hsp104
94c3sylB_
not modelled 99.8 23
PDB header:chaperone
Chain: B: PDB Molecule:protein cbbx;
PDBTitle: crystal structure of the aaa+ protein cbbx, native structure
95c4ciuA_
not modelled 99.8 23
PDB header:chaperone
Chain: A: PDB Molecule:chaperone protein clpb;
PDBTitle: crystal structure of e. coli clpb
96c1r6bX_
not modelled 99.8 21
PDB header:hydrolase
Chain: X: PDB Molecule:clpa protein;
PDBTitle: high resolution crystal structure of clpa
97c6hecH_
not modelled 99.8 18
PDB header:hydrolase
Chain: H: PDB Molecule:proteasome-activating nucleotidase;
PDBTitle: pan-proteasome in state 4
98c3cf2B_
not modelled 99.8 25
PDB header:transport protein
Chain: B: PDB Molecule:transitional endoplasmic reticulum atpase;
PDBTitle: structure of p97/vcp in complex with adp/amp-pnp
99c5mpaL_
not modelled 99.8 14
PDB header:hydrolase
Chain: L: PDB Molecule:26s protease subunit rpt4;
PDBTitle: 26s proteasome in presence of atp (s2)
100c1iy2A_
not modelled 99.8 20
PDB header:hydrolase
Chain: A: PDB Molecule:atp-dependent metalloprotease ftsh;
PDBTitle: crystal structure of the ftsh atpase domain from thermus2 thermophilus
101d1lv7a_
not modelled 99.8 19
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
102d1ixza_
not modelled 99.8 21
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
103c3hteC_
not modelled 99.8 25
PDB header:motor protein
Chain: C: PDB Molecule:atp-dependent clp protease atp-binding subunit clpx;
PDBTitle: crystal structure of nucleotide-free hexameric clpx
104c4b4tM_
not modelled 99.8 19
PDB header:hydrolase
Chain: M: PDB Molecule:26s protease regulatory subunit 6a;
PDBTitle: near-atomic resolution structural model of the yeast 26s proteasome
105c5ifwB_
not modelled 99.8 23
PDB header:signaling protein
Chain: B: PDB Molecule:transitional endoplasmic reticulum atpase;
PDBTitle: quantitative interaction mapping reveals an extended ubiquitin2 regulatory domain in aspl that disrupts functional p97 hexamers and3 induces cell death
106d1fnna2
not modelled 99.8 12
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
107c6azyA_
not modelled 99.8 25
PDB header:chaperone
Chain: A: PDB Molecule:heat shock protein hsp104;
PDBTitle: crystal structure of hsp104 r328m/r757m mutant from calcarisporiella2 thermophila
108c5uj7C_
not modelled 99.8 15
PDB header:dna binding protein
Chain: C: PDB Molecule:origin recognition complex subunit 4;
PDBTitle: structure of the active form of human origin recognition complex2 atpase motor module, complex subunits 1, 4, 5
109c4b4tK_
not modelled 99.8 16
PDB header:hydrolase
Chain: K: PDB Molecule:26s protease regulatory subunit 6b homolog;
PDBTitle: near-atomic resolution structural model of the yeast 26s proteasome
110c3zw6B_
not modelled 99.8 13
PDB header:photosynthesis
Chain: B: PDB Molecule:ribulose bisphosphate carboxylase/oxygenase activase 1,
PDBTitle: model of hexameric aaa domain arrangement of green-type rubisco2 activase from tobacco.
111c6djvE_
not modelled 99.8 15
PDB header:chaperone
Chain: E: PDB Molecule:chaperone protein clpb;
PDBTitle: mtb clpb in complex with atpgammas and casein, conformer 2
112c5t0gA_
not modelled 99.8 18
PDB header:hydrolase
Chain: A: PDB Molecule:26s protease regulatory subunit 7;
PDBTitle: structural basis for dynamic regulation of the human 26s proteasome
113c1s3sA_
not modelled 99.8 17
PDB header:protein binding
Chain: A: PDB Molecule:transitional endoplasmic reticulum atpase (ter
PDBTitle: crystal structure of aaa atpase p97/vcp nd1 in complex with2 p47 c
114d1ny5a2
not modelled 99.8 20
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
115d1e32a2
not modelled 99.8 20
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
116c2p65A_
not modelled 99.8 23
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein pf08_0063;
PDBTitle: crystal structure of the first nucleotide binding domain of2 chaperone clpb1, putative, (pv089580) from plasmodium vivax
117c6em8F_
not modelled 99.8 23
PDB header:chaperone
Chain: F: PDB Molecule:atp-dependent clp protease atp-binding subunit clpc;
PDBTitle: s.aureus clpc resting state, c2 symmetrised
118c6em8H_
not modelled 99.8 19
PDB header:chaperone
Chain: H: PDB Molecule:atp-dependent clp protease atp-binding subunit clpc;
PDBTitle: s.aureus clpc resting state, c2 symmetrised
119d1l8qa2
not modelled 99.8 13
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
120c5kneF_
not modelled 99.8 21
PDB header:chaperone
Chain: F: PDB Molecule:heat shock protein 104;
PDBTitle: cryoem reconstruction of hsp104 hexamer

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite