Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3724A_(cut5a)_4169645_4169887
DateFri Aug 9 18:20:42 BST 2019
Unique Job ID05b3ea9bed201b2a
SequenceMDVIRWARRL ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:39.794 Y:37.585 Z:23.666
Model (left) based on template c4psdA_
Top template information
PDB header:hydrolase
Chain: A: PDB Molecule:carbohydrate esterase family 5;
PDBTitle: structure of trichoderma reesei cutinase native form.
Confidence and coverage
Confidence: 99.2% Coverage: 86%
69 residues ( 86% of your sequence) have been modelled with 99.2% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c4psdA_



99.2 26
PDB header:hydrolase
Chain: A: PDB Molecule:carbohydrate esterase family 5;
PDBTitle: structure of trichoderma reesei cutinase native form.
2c4oylC_



98.9 39
PDB header:hydrolase
Chain: C: PDB Molecule:cutinase;
PDBTitle: humicola insolens cutinase in complex with mono-ethylphosphate
3c2czqB_



98.9 24
PDB header:hydrolase
Chain: B: PDB Molecule:cutinase-like protein;
PDBTitle: a novel cutinase-like protein from cryptococcus sp.
4d1cexa_



98.8 26
Fold:alpha/beta-Hydrolases
Superfamily:alpha/beta-Hydrolases
Family:Cutinase-like
5c5x88A_



98.8 41
PDB header:hydrolase
Chain: A: PDB Molecule:cutinase;
PDBTitle: a crystal structure of cutinases from malbranchea cinnamomea
6c3gbsA_



98.5 30
PDB header:hydrolase
Chain: A: PDB Molecule:cutinase 1;
PDBTitle: crystal structure of aspergillus oryzae cutinase
7c3dd5F_



98.4 39
PDB header:hydrolase
Chain: F: PDB Molecule:cutinase;
PDBTitle: glomerella cingulata e600-cutinase complex
8d1qoza_



98.2 32
Fold:alpha/beta-Hydrolases
Superfamily:alpha/beta-Hydrolases
Family:Cutinase-like
9d1g66a_



98.1 34
Fold:alpha/beta-Hydrolases
Superfamily:alpha/beta-Hydrolases
Family:Cutinase-like
10c3ajaA_



97.8 29
PDB header:hydrolase
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of msmeg_6394
11c3hc7A_



87.7 26
PDB header:cell adhesion
Chain: A: PDB Molecule:gene 12 protein;
PDBTitle: crystal structure of lysin b from mycobacteriophage d29
12d2pv7a2



18.7 56
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:6-phosphogluconate dehydrogenase-like, N-terminal domain
13d1jmsa4



18.2 11
Fold:Nucleotidyltransferase
Superfamily:Nucleotidyltransferase
Family:DNA polymerase beta-like
14c3ingA_



16.1 25
PDB header:oxidoreductase
Chain: A: PDB Molecule:homoserine dehydrogenase;
PDBTitle: crystal structure of homoserine dehydrogenase (np_394635.1) from2 thermoplasma acidophilum at 1.95 a resolution
15c3b20R_



15.6 22
PDB header:oxidoreductase
Chain: R: PDB Molecule:glyceraldehyde 3-phosphate dehydrogenase (nadp+);
PDBTitle: crystal structure of glyceraldehyde-3-phosphate dehydrogenase2 complexed with nadfrom synechococcus elongatus"
16c1hdgO_



15.2 22
PDB header:oxidoreductase (aldehy(d)-nad(a))
Chain: O: PDB Molecule:holo-d-glyceraldehyde-3-phosphate dehydrogenase;
PDBTitle: the crystal structure of holo-glyceraldehyde-3-phosphate dehydrogenase2 from the hyperthermophilic bacterium thermotoga maritima at 2.53 angstroms resolution
17c5d5pC_



15.1 35
PDB header:transferase
Chain: C: PDB Molecule:hcgb;
PDBTitle: hcgb from methanococcus maripaludis
18c2d2iO_



14.5 22
PDB header:oxidoreductase
Chain: O: PDB Molecule:glyceraldehyde 3-phosphate dehydrogenase;
PDBTitle: crystal structure of nadp-dependent glyceraldehyde-3-2 phosphate dehydrogenase from synechococcus sp. complexed3 with nadp+
19c5e38D_



13.6 36
PDB header:transferase
Chain: D: PDB Molecule:uracil phosphoribosyltransferase;
PDBTitle: structural basis of mapping the spontaneous mutations with 5-2 flourouracil in uracil phosphoribosyltransferase from mycobacterium3 tuberculosis
20c3docD_



12.9 28
PDB header:oxidoreductase
Chain: D: PDB Molecule:glyceraldehyde 3-phosphate dehydrogenase;
PDBTitle: crystal structure of trka glyceraldehyde-3-phosphate dehydrogenase2 from brucella melitensis
21d1i36a2



not modelled 12.9 33
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:6-phosphogluconate dehydrogenase-like, N-terminal domain
22c1kdhA_



not modelled 12.4 11
PDB header:transferase/dna
Chain: A: PDB Molecule:terminal deoxynucleotidyltransferase short
PDBTitle: binary complex of murine terminal deoxynucleotidyl2 transferase with a primer single stranded dna
23d1qb7a_



not modelled 12.1 15
Fold:PRTase-like
Superfamily:PRTase-like
Family:Phosphoribosyltransferases (PRTases)
24c1cerC_



not modelled 12.1 28
PDB header:oxidoreductase (aldehyde(d)-nad(a))
Chain: C: PDB Molecule:holo-d-glyceraldehyde-3-phosphate dehydrogenase;
PDBTitle: determinants of enzyme thermostability observed in the2 molecular structure of thermus aquaticus d-glyceraldehyde-3 3-phosphate dehydrogenase at 2.5 angstroms resolution
25c3brcA_



not modelled 11.8 42
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:conserved protein of unknown function;
PDBTitle: crystal structure of a conserved protein of unknown function from2 methanobacterium thermoautotrophicum
26c1b7gO_



not modelled 11.8 28
PDB header:oxidoreductase
Chain: O: PDB Molecule:protein (glyceraldehyde 3-phosphate dehydrogenase);
PDBTitle: glyceraldehyde 3-phosphate dehydrogenase
27c2lepA_



not modelled 11.5 36
PDB header:hydrolase
Chain: A: PDB Molecule:rhomboid protease glpg 1;
PDBTitle: solution structure of n-terminal cytosolic domain of rhomboid2 intramembrane protease from escherichia coli
28c5nc8B_



not modelled 11.4 28
PDB header:transport protein
Chain: B: PDB Molecule:potassium efflux system protein;
PDBTitle: shewanella denitrificans kef ctd in amp bound form
29d1ebfa1



not modelled 11.1 44
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
30c3cieC_



not modelled 11.0 28
PDB header:oxidoreductase
Chain: C: PDB Molecule:glyceraldehyde-3-phosphate dehydrogenase;
PDBTitle: crystal structure of glyceraldehyde 3-phosphate2 dehydrogenase from cryptosporidium parvum
31c2pv7B_



not modelled 11.0 50
PDB header:isomerase, oxidoreductase
Chain: B: PDB Molecule:t-protein [includes: chorismate mutase (ec 5.4.99.5) (cm)
PDBTitle: crystal structure of chorismate mutase / prephenate dehydrogenase2 (tyra) (1574749) from haemophilus influenzae rd at 2.00 a resolution
32c2yjzC_



not modelled 10.9 22
PDB header:oxidoreductase
Chain: C: PDB Molecule:metalloreductase steap4;
PDBTitle: rat steap4 oxidoreductase domain complexed with nadp
33c2rafC_



not modelled 10.8 22
PDB header:oxidoreductase
Chain: C: PDB Molecule:putative dinucleotide-binding oxidoreductase;
PDBTitle: crystal structure of putative dinucleotide-binding oxidoreductase2 (np_786167.1) from lactobacillus plantarum at 1.60 a resolution
34c2yyyB_



not modelled 10.4 38
PDB header:oxidoreductase
Chain: B: PDB Molecule:glyceraldehyde-3-phosphate dehydrogenase;
PDBTitle: crystal structure of glyceraldehyde-3-phosphate2 dehydrogenase
35c2i5pO_



not modelled 10.3 22
PDB header:oxidoreductase
Chain: O: PDB Molecule:glyceraldehyde-3-phosphate dehydrogenase 1;
PDBTitle: crystal structure of glyceraldehyde-3-phosphate2 dehydrogenase isoform 1 from k. marxianus
36c2f1kD_



not modelled 10.3 33
PDB header:oxidoreductase
Chain: D: PDB Molecule:prephenate dehydrogenase;
PDBTitle: crystal structure of synechocystis arogenate dehydrogenase
37c4narA_



not modelled 10.3 16
PDB header:isomerase
Chain: A: PDB Molecule:putative uronate isomerase;
PDBTitle: crystal structure of the q9wys3 protein from thermotoga maritima.2 northeast structural genomics consortium target vr152
38c2g5cD_



not modelled 10.2 44
PDB header:oxidoreductase
Chain: D: PDB Molecule:prephenate dehydrogenase;
PDBTitle: crystal structure of prephenate dehydrogenase from aquifex aeolicus
39c1cf2Q_



not modelled 9.8 33
PDB header:oxidoreductase
Chain: Q: PDB Molecule:protein (glyceraldehyde-3-phosphate dehydrogenase);
PDBTitle: three-dimensional structure of d-glyceraldehyde-3-phosphate2 dehydrogenase from the hyperthermophilic archaeon methanothermus3 fervidus
40c3eywA_



not modelled 9.7 29
PDB header:transport protein
Chain: A: PDB Molecule:c-terminal domain of glutathione-regulated potassium-efflux
PDBTitle: crystal structure of the c-terminal domain of e. coli kefc in complex2 with keff
41c2pkrI_



not modelled 9.7 25
PDB header:oxidoreductase
Chain: I: PDB Molecule:glyceraldehyde-3-phosphate dehydrogenase aor;
PDBTitle: crystal structure of (a+cte)4 chimeric form of photosyntetic2 glyceraldehyde-3-phosphate dehydrogenase, complexed with nadp
42c2ep7B_



not modelled 9.6 28
PDB header:oxidoreductase
Chain: B: PDB Molecule:glyceraldehyde-3-phosphate dehydrogenase;
PDBTitle: structural study of project id aq_1065 from aquifex aeolicus vf5
43c1rm4O_



not modelled 9.2 25
PDB header:oxidoreductase
Chain: O: PDB Molecule:glyceraldehyde 3-phosphate dehydrogenase a;
PDBTitle: crystal structure of recombinant photosynthetic glyceraldehyde-3-2 phosphate dehydrogenase a4 isoform, complexed with nadp
44c4qx6A_



not modelled 9.2 22
PDB header:oxidoreductase
Chain: A: PDB Molecule:glyceraldehyde 3-phosphate dehydrogenase;
PDBTitle: crystal structure of glyceraldehyde-3-phosphate dehydrogenase from2 streptococcus agalactiae nem316 at 2.46 angstrom resolution
45d2jfga1



not modelled 9.2 32
Fold:MurCD N-terminal domain
Superfamily:MurCD N-terminal domain
Family:MurCD N-terminal domain
46c5t8xA_



not modelled 9.0 22
PDB header:oxidoreductase
Chain: A: PDB Molecule:prephenate dehydrogenase 1;
PDBTitle: prephenate dehydrogenase from soybean
47c4pg8B_



not modelled 8.7 22
PDB header:oxidoreductase
Chain: B: PDB Molecule:homoserine dehydrogenase;
PDBTitle: crystal structure of s. aureus homoserine dehydrogenase at ph8.5
48d2ahra2



not modelled 8.2 17
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:6-phosphogluconate dehydrogenase-like, N-terminal domain
49c2b4rQ_



not modelled 8.1 28
PDB header:oxidoreductase
Chain: Q: PDB Molecule:glyceraldehyde-3-phosphate dehydrogenase;
PDBTitle: crystal structure of glyceraldehyde-3-phosphate dehydrogenase from2 plasmodium falciparum at 2.25 angstrom resolution reveals intriguing3 extra electron density in the active site
50c5ur0B_



not modelled 7.6 28
PDB header:oxidoreductase
Chain: B: PDB Molecule:glyceraldehyde-3-phosphate dehydrogenase;
PDBTitle: crystallographic structure of glyceraldehyde-3-phosphate dehydrogenase2 from naegleria gruberi
51c2czcD_



not modelled 7.5 25
PDB header:oxidoreductase
Chain: D: PDB Molecule:glyceraldehyde-3-phosphate dehydrogenase;
PDBTitle: crystal structure of glyceraldehyde-3-phosphate dehydrogenase from2 pyrococcus horikoshii ot3
52c3c85A_



not modelled 7.5 35
PDB header:transport protein
Chain: A: PDB Molecule:putative glutathione-regulated potassium-efflux system
PDBTitle: crystal structure of trka domain of putative glutathione-regulated2 potassium-efflux kefb from vibrio parahaemolyticus
53c4xb1B_



not modelled 7.4 25
PDB header:oxidoreductase
Chain: B: PDB Molecule:319aa long hypothetical homoserine dehydrogenase;
PDBTitle: hyperthermophilic archaeal homoserine dehydrogenase in complex with2 nadph
54c5bseF_



not modelled 7.4 17
PDB header:oxidoreductase
Chain: F: PDB Molecule:pyrroline-5-carboxylate reductase;
PDBTitle: crystal structure of medicago truncatula (delta)1-pyrroline-5-2 carboxylate reductase (mtp5cr)
55d2g5ca2



not modelled 7.2 44
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:6-phosphogluconate dehydrogenase-like, N-terminal domain
56c3c8mA_



not modelled 7.2 31
PDB header:oxidoreductase
Chain: A: PDB Molecule:homoserine dehydrogenase;
PDBTitle: crystal structure of homoserine dehydrogenase from thermoplasma2 volcanium
57d1y60a_



not modelled 7.1 14
Fold:Ribosomal protein S5 domain 2-like
Superfamily:Ribosomal protein S5 domain 2-like
Family:Formaldehyde-activating enzyme, FAE
58c2izzE_



not modelled 6.9 17
PDB header:oxidoreductase
Chain: E: PDB Molecule:pyrroline-5-carboxylate reductase 1;
PDBTitle: crystal structure of human pyrroline-5-carboxylate reductase
59c4gbjB_



not modelled 6.8 28
PDB header:oxidoreductase
Chain: B: PDB Molecule:6-phosphogluconate dehydrogenase nad-binding;
PDBTitle: crystal structure of nad-binding 6-phosphogluconate dehydrogenase from2 dyadobacter fermentans
60d1bd3a_



not modelled 6.7 40
Fold:PRTase-like
Superfamily:PRTase-like
Family:Phosphoribosyltransferases (PRTases)
61d2hmva1



not modelled 6.7 41
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Potassium channel NAD-binding domain
62c3hq4R_



not modelled 6.5 22
PDB header:oxidoreductase
Chain: R: PDB Molecule:glyceraldehyde-3-phosphate dehydrogenase 1;
PDBTitle: crystal structure of c151s mutant of glyceraldehyde-3-phosphate2 dehydrogenase 1 (gapdh1) complexed with nad from staphylococcus3 aureus mrsa252 at 2.2 angstrom resolution
63c1ebuA_



not modelled 6.5 44
PDB header:oxidoreductase
Chain: A: PDB Molecule:homoserine dehydrogenase;
PDBTitle: homoserine dehydrogenase complex with nad analogue and l-2 homoserine
64c1s7cA_



not modelled 6.3 22
PDB header:structural genomics, oxidoreductase
Chain: A: PDB Molecule:glyceraldehyde 3-phosphate dehydrogenase a;
PDBTitle: crystal structure of mes buffer bound form of glyceraldehyde 3-2 phosphate dehydrogenase from escherichia coli
65c2x5kO_



not modelled 6.3 39
PDB header:oxidoreductase
Chain: O: PDB Molecule:d-erythrose-4-phosphate dehydrogenase;
PDBTitle: structure of an active site mutant of the d-erythrose-4-phosphate2 dehydrogenase from e. coli
66d1i5ea_



not modelled 6.2 40
Fold:PRTase-like
Superfamily:PRTase-like
Family:Phosphoribosyltransferases (PRTases)
67c6ok4A_



not modelled 6.1 31
PDB header:oxidoreductase
Chain: A: PDB Molecule:glyceraldehyde-3-phosphate dehydrogenase;
PDBTitle: crystal structure of glyceraldehyde-3-phosphate dehydrogenase (gapdh)2 from chlamydia trachomatis with bound nad
68c4nqkD_



not modelled 6.1 26
PDB header:hydrolase/apoptosis
Chain: D: PDB Molecule:probable atp-dependent rna helicase ddx58;
PDBTitle: structure of an ubiquitin complex
69c5avoA_



not modelled 5.9 38
PDB header:oxidoreductase
Chain: A: PDB Molecule:homoserine dehydrogenase;
PDBTitle: crystal structure of the reduced form of homoserine dehydrogenase from2 sulfolobus tokodaii.
70d1b7go1



not modelled 5.9 31
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
71c3ktdC_



not modelled 5.8 28
PDB header:oxidoreductase
Chain: C: PDB Molecule:prephenate dehydrogenase;
PDBTitle: crystal structure of a putative prephenate dehydrogenase (cgl0226)2 from corynebacterium glutamicum atcc 13032 at 2.60 a resolution
72d1v9sa1



not modelled 5.8 40
Fold:PRTase-like
Superfamily:PRTase-like
Family:Phosphoribosyltransferases (PRTases)
73c3triB_



not modelled 5.7 28
PDB header:oxidoreductase
Chain: B: PDB Molecule:pyrroline-5-carboxylate reductase;
PDBTitle: structure of a pyrroline-5-carboxylate reductase (proc) from coxiella2 burnetii
74c5b37A_



not modelled 5.7 26
PDB header:oxidoreductase
Chain: A: PDB Molecule:tryptophan dehydrogenase;
PDBTitle: crystal structure of l-tryptophan dehydrogenase from nostoc2 punctiforme
75c2ehjA_



not modelled 5.6 40
PDB header:transferase
Chain: A: PDB Molecule:uracil phosphoribosyltransferase;
PDBTitle: structure of uracil phosphoribosyl transferase
76d2zjrl1



not modelled 5.5 35
Fold:Ribonuclease H-like motif
Superfamily:Translational machinery components
Family:Ribosomal protein L18 and S11
77c1ffvB_



not modelled 5.5 33
PDB header:hydrolase
Chain: B: PDB Molecule:cutl, molybdoprotein of carbon monoxide
PDBTitle: carbon monoxide dehydrogenase from hydrogenophaga2 pseudoflava
78d1qp8a1



not modelled 5.5 29
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Formate/glycerate dehydrogenases, NAD-domain
79c2graA_



not modelled 5.4 17
PDB header:oxidoreductase
Chain: A: PDB Molecule:pyrroline-5-carboxylate reductase 1;
PDBTitle: crystal structure of human pyrroline-5-carboxylate reductase complexed2 with nadp
80c2rcyB_



not modelled 5.4 17
PDB header:oxidoreductase
Chain: B: PDB Molecule:pyrroline carboxylate reductase;
PDBTitle: crystal structure of plasmodium falciparum pyrroline carboxylate2 reductase (mal13p1.284) with nadp bound
81c2ejwB_



not modelled 5.4 29
PDB header:oxidoreductase
Chain: B: PDB Molecule:homoserine dehydrogenase;
PDBTitle: homoserine dehydrogenase from thermus thermophilus hb8
82c3llvA_



not modelled 5.3 28
PDB header:nad(p) binding protein
Chain: A: PDB Molecule:exopolyphosphatase-related protein;
PDBTitle: the crystal structure of the nad(p)-binding domain of an2 exopolyphosphatase-related protein from archaeoglobus fulgidus to3 1.7a
83d1xtta1



not modelled 5.3 40
Fold:PRTase-like
Superfamily:PRTase-like
Family:Phosphoribosyltransferases (PRTases)
84c2ahrB_



not modelled 5.3 17
PDB header:oxidoreductase
Chain: B: PDB Molecule:putative pyrroline carboxylate reductase;
PDBTitle: crystal structures of 1-pyrroline-5-carboxylate reductase from human2 pathogen streptococcus pyogenes
85c3pduF_



not modelled 5.3 33
PDB header:oxidoreductase
Chain: F: PDB Molecule:3-hydroxyisobutyrate dehydrogenase family protein;
PDBTitle: crystal structure of gamma-hydroxybutyrate dehydrogenase from2 geobacter sulfurreducens in complex with nadp+
86c6dzsD_



not modelled 5.3 26
PDB header:oxidoreductase
Chain: D: PDB Molecule:homoserine dehydrogenase;
PDBTitle: mycobacterial homoserine dehydrogenase thra in complex with nadp
87c5jyfB_



not modelled 5.3 22
PDB header:oxidoreductase
Chain: B: PDB Molecule:glyceraldehyde-3-phosphate dehydrogenase;
PDBTitle: structures of streptococcus agalactiae gbs gapdh in different2 enzymatic states
88d1o5oa_



not modelled 5.2 40
Fold:PRTase-like
Superfamily:PRTase-like
Family:Phosphoribosyltransferases (PRTases)
89c3b1fA_



not modelled 5.2 17
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative prephenate dehydrogenase;
PDBTitle: crystal structure of prephenate dehydrogenase from streptococcus2 mutans
90c4e21B_



not modelled 5.2 39
PDB header:oxidoreductase
Chain: B: PDB Molecule:6-phosphogluconate dehydrogenase (decarboxylating);
PDBTitle: the crystal structure of 6-phosphogluconate dehydrogenase from2 geobacter metallireducens
91d2gycm1



not modelled 5.1 35
Fold:Ribonuclease H-like motif
Superfamily:Translational machinery components
Family:Ribosomal protein L18 and S11

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