Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3728_(-)_4175051_4178248
DateFri Aug 9 18:20:42 BST 2019
Unique Job ID439da6e4b3a3a749
SequenceVHTVATNNAA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:46.222 Y:49.295 Z:64.831
Model (left) based on template c5fyaA_
Top template information
PDB header:hydrolase
Chain: A: PDB Molecule:patatin-like protein, plpd;
PDBTitle: cubic crystal of the native plpd
Confidence and coverage
Confidence:100.0% Coverage: 23%
248 residues ( 23% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
749 residues ( 70%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
3D viewing
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5fyaA_
100.0 32
PDB header:hydrolase
Chain: A: PDB Molecule:patatin-like protein, plpd;
PDBTitle: cubic crystal of the native plpd
2c4akfA_
100.0 24
PDB header:transferase
Chain: A: PDB Molecule:vipd;
PDBTitle: crystal structure of vipd from legionella pneumophila
3c4zp0A_
100.0 18
PDB header:transport protein
Chain: A: PDB Molecule:multidrug transporter mdfa;
PDBTitle: crystal structure of e. coli multidrug transporter mdfa in complex2 with deoxycholate
4d1pw4a_
100.0 13
Fold:MFS general substrate transporter
Superfamily:MFS general substrate transporter
Family:Glycerol-3-phosphate transporter
5c4ldsB_
100.0 16
PDB header:transport protein, membrane protein
Chain: B: PDB Molecule:bicyclomycin resistance protein tcab;
PDBTitle: the inward-facing structure of the glucose transporter from2 staphylococcus epidermidis
6c3wdoA_
100.0 15
PDB header:transport protein
Chain: A: PDB Molecule:mfs transporter;
PDBTitle: structure of e. coli yajr transporter
7c6e9oA_
100.0 13
PDB header:membrane protein
Chain: A: PDB Molecule:d-galactonate transport;
PDBTitle: e. coli d-galactonate:proton symporter mutant e133q in the outward2 substrate-bound form
8c6g9xB_
100.0 18
PDB header:membrane protein
Chain: B: PDB Molecule:major facilitator superfamily mfs_1;
PDBTitle: crystal structure of a mfs transporter at 2.54 angstroem resolution
9c2gfpA_
100.0 21
PDB header:membrane protein
Chain: A: PDB Molecule:multidrug resistance protein d;
PDBTitle: structure of the multidrug transporter emrd from2 escherichia coli
10c6gs7A_
100.0 10
PDB header:membrane protein
Chain: A: PDB Molecule:dipeptide and tripeptide permease a;
PDBTitle: crystal structure of peptide transporter dtpa-nanobody in glycine2 buffer
11c4apsB_
100.0 14
PDB header:transport protein
Chain: B: PDB Molecule:di-or tripeptide h+ symporter;
PDBTitle: crystal structure of a pot family peptide transporter in an inward2 open conformation.
12c3o7pA_
100.0 16
PDB header:transport protein
Chain: A: PDB Molecule:l-fucose-proton symporter;
PDBTitle: crystal structure of the e.coli fucose:proton symporter, fucp (n162a)
13c4ikyA_
100.0 16
PDB header:transport protein
Chain: A: PDB Molecule:di-tripeptide abc transporter (permease);
PDBTitle: crystal structure of peptide transporter pot (e310q mutant) in complex2 with sulfate
14c4qmkB_
100.0 28
PDB header:toxin
Chain: B: PDB Molecule:type iii secretion system effector protein exou;
PDBTitle: crystal structure of type iii effector protein exou (exou)
15c6exsA_
100.0 14
PDB header:membrane protein
Chain: A: PDB Molecule:peptide abc transporter permease;
PDBTitle: crystal structure of a pot family transporter in complex with2 thioalcohol conjugated peptide.
16c6ei3A_
100.0 14
PDB header:membrane protein
Chain: A: PDB Molecule:proton-dependent oligopeptide transporter family protein;
PDBTitle: crystal structure of auto inhibited pot family peptide transporter
17c6h7dA_
100.0 15
PDB header:membrane protein
Chain: A: PDB Molecule:sugar transport protein 10;
PDBTitle: crystal structure of a. thaliana sugar transport protein 10 in complex2 with glucose in the outward occluded state
18c4cl5B_
100.0 14
PDB header:transport protein
Chain: B: PDB Molecule:nitrate transporter 1.1;
PDBTitle: crystal structure of the nitrate transporter nrt1.1 from2 arabidopsis thaliana in complex with nitrate.
19c4w6vA_
100.0 14
PDB header:transport protein
Chain: A: PDB Molecule:di-/tripeptide transporter;
PDBTitle: crystal structure of a peptide transporter from yersinia2 enterocolitica at 3 a resolution
20c4q65A_
100.0 12
PDB header:transport protein
Chain: A: PDB Molecule:dipeptide permease d;
PDBTitle: structure of the e. coli peptide transporter ybgh
21c4akxB_
not modelled 100.0 21
PDB header:transport protein
Chain: B: PDB Molecule:exou;
PDBTitle: structure of the heterodimeric complex exou-spcu from the type iii2 secretion system (t3ss) of pseudomonas aeruginosa
22c2xutC_
not modelled 100.0 14
PDB header:transport protein
Chain: C: PDB Molecule:proton/peptide symporter family protein;
PDBTitle: crystal structure of a proton dependent oligopeptide (pot) family2 transporter.
23c3tu3B_
not modelled 100.0 18
PDB header:toxin/toxin chaperone
Chain: B: PDB Molecule:exou;
PDBTitle: 1.92 angstrom resolution crystal structure of the full-length spcu in2 complex with full-length exou from the type iii secretion system of3 pseudomonas aeruginosa
24c4ybqB_
not modelled 100.0 14
PDB header:transport protein/immune system
Chain: B: PDB Molecule:solute carrier family 2, facilitated glucose transporter
PDBTitle: rat glut5 with fv in the outward-open form
25c4pypA_
not modelled 100.0 12
PDB header:transport protein
Chain: A: PDB Molecule:solute carrier family 2, facilitated glucose transporter
PDBTitle: crystal structure of the human glucose transporter glut1
26c5c65A_
not modelled 100.0 13
PDB header:transport protein
Chain: A: PDB Molecule:solute carrier family 2, facilitated glucose transporter
PDBTitle: structure of the human glucose transporter glut3 / slc2a3
27d1oxwa_
not modelled 100.0 19
Fold:FabD/lysophospholipase-like
Superfamily:FabD/lysophospholipase-like
Family:Patatin
28c4gbzA_
not modelled 100.0 16
PDB header:transport protein
Chain: A: PDB Molecule:d-xylose-proton symporter;
PDBTitle: the structure of the mfs (major facilitator superfamily) proton:xylose2 symporter xyle bound to d-glucose
29c4j05A_
not modelled 100.0 17
PDB header:transport protein
Chain: A: PDB Molecule:phosphate transporter;
PDBTitle: crystal structure of a eukaryotic phosphate transporter
30c4lepB_
not modelled 100.0 12
PDB header:membrane protein, tranport protein
Chain: B: PDB Molecule:proton:oligopeptide symporter pot family;
PDBTitle: structural insights into substrate recognition in proton dependent2 oligopeptide transporters
31c5aynA_
not modelled 100.0 13
PDB header:transport protein
Chain: A: PDB Molecule:solute carrier family 39 (iron-regulated transporter);
PDBTitle: crystal structure of a bacterial homologue of iron transporter2 ferroportin in outward-facing state
32c4iu8A_
not modelled 99.9 11
PDB header:transport protein
Chain: A: PDB Molecule:nitrite extrusion protein 2;
PDBTitle: crystal structure of a membrane transporter (selenomethionine2 derivative)
33c1pv7B_
not modelled 99.9 14
PDB header:transport protein
Chain: B: PDB Molecule:lactose permease;
PDBTitle: crystal structure of lactose permease with tdg
34d1pv7a_
not modelled 99.9 14
Fold:MFS general substrate transporter
Superfamily:MFS general substrate transporter
Family:LacY-like proton/sugar symporter
35c4iu9A_
not modelled 99.9 12
PDB header:transport protein
Chain: A: PDB Molecule:nitrite extrusion protein 2;
PDBTitle: crystal structure of a membrane transporter
36c6aunB_
not modelled 99.9 20
PDB header:hydrolase
Chain: B: PDB Molecule:pla2g6, ipla2beta;
PDBTitle: calcium-independent phospholipase a2 beta
37c5aymA_
not modelled 99.9 15
PDB header:transport protein
Chain: A: PDB Molecule:solute carrier family 39 (iron-regulated transporter);
PDBTitle: crystal structure of a bacterial homologue of iron transporter2 ferroportin in outward-facing state with soaked iron
38c4orfA_
not modelled 99.8 21
PDB header:transferase
Chain: A: PDB Molecule:acetyltransferase pat;
PDBTitle: camp-binding acyltransferase from mycobacterium smegmatis, mutant r95k
39c4avcA_
not modelled 99.7 21
PDB header:transferase
Chain: A: PDB Molecule:lysine acetyltransferase;
PDBTitle: crystal structure of protein lysine acetyltransferase rv09982 in complex with acetyl coa and camp
40c5jonA_
not modelled 99.6 23
PDB header:transport protein
Chain: A: PDB Molecule:maltose-binding periplasmic protein,potassium/sodium
PDBTitle: crystal structure of the unliganded form of hcn2 cnbd
41c6ob7A_
not modelled 99.6 13
PDB header:transport protein
Chain: A: PDB Molecule:equilibrative nucleoside transporter 1;
PDBTitle: human equilibrative nucleoside transporter-1, dilazep bound
42c4m64D_
not modelled 99.6 9
PDB header:transport protein
Chain: D: PDB Molecule:melibiose carrier protein;
PDBTitle: 3d crystal structure of na+/melibiose symporter of salmonella2 typhimurium
43c6hq2A_
not modelled 99.6 30
PDB header:signaling protein
Chain: A: PDB Molecule:eal enzyme bd1971;
PDBTitle: structure of eal enzyme bd1971 - apo form
44c4chwB_
not modelled 99.6 24
PDB header:transport protein
Chain: B: PDB Molecule:cyclic nucleotide-gated potassium channel mll3241;
PDBTitle: the electron crystallography structure of the camp-free potassium2 channel mlok1
45c3gydA_
not modelled 99.6 20
PDB header:dna binding protein
Chain: A: PDB Molecule:cyclic nucleotide-binding domain;
PDBTitle: crystal structure of a cyclic nucleotide-binding domain (mfla_1926)2 from methylobacillus flagellatus kt at 1.79 a resolution
46c4myiA_
not modelled 99.5 19
PDB header:transferase
Chain: A: PDB Molecule:cgmp-dependent protein kinase, putative;
PDBTitle: crystal structure of pvx_084705
47c6g52H_
not modelled 99.5 23
PDB header:metal transport
Chain: H: PDB Molecule:metal transporter cnnm4;
PDBTitle: crystal structure of the cnmp binding domain of the magnesium2 transporter cnnm4
48c3j4qC_
not modelled 99.5 22
PDB header:transferase
Chain: C: PDB Molecule:camp-dependent protein kinase type ii-alpha regulatory
PDBTitle: pseudo-atomic model of the akap18-pka complex in a bent conformation2 derived from electron microscopy
49c2pqqD_
not modelled 99.5 26
PDB header:transcription
Chain: D: PDB Molecule:putative transcriptional regulator;
PDBTitle: structural genomics, the crystal structure of the n-terminal domain of2 a transcriptional regulator from streptomyces coelicolor a3(2)
50d2h6ca2
not modelled 99.5 13
Fold:Double-stranded beta-helix
Superfamily:cAMP-binding domain-like
Family:cAMP-binding domain
51d1ft9a2
not modelled 99.5 15
Fold:Double-stranded beta-helix
Superfamily:cAMP-binding domain-like
Family:CO-sensing protein CooA, N-terminal domain
52c2byvE_
not modelled 99.5 31
PDB header:regulation
Chain: E: PDB Molecule:rap guanine nucleotide exchange factor 4;
PDBTitle: structure of the camp responsive exchange factor epac2 in2 its auto-inhibited state
53c4rfaA_
not modelled 99.5 9
PDB header:transcription regulator
Chain: A: PDB Molecule:lmo0740 protein;
PDBTitle: crystal structure of cyclic nucleotide-binding domain containing2 protein from listeria monocytogenes egd-e
54d2coha2
not modelled 99.4 17
Fold:Double-stranded beta-helix
Superfamily:cAMP-binding domain-like
Family:cAMP-binding domain
55d1ne6a2
not modelled 99.4 17
Fold:Double-stranded beta-helix
Superfamily:cAMP-binding domain-like
Family:cAMP-binding domain
56c4dinB_
not modelled 99.4 20
PDB header:transferase/transport protein
Chain: B: PDB Molecule:camp-dependent protein kinase type i-beta regulatory
PDBTitle: novel localization and quaternary structure of the pka ri beta2 holoenzyme
57d2oz6a2
not modelled 99.4 27
Fold:Double-stranded beta-helix
Superfamily:cAMP-binding domain-like
Family:cAMP-binding domain
58d2gaua2
not modelled 99.4 17
Fold:Double-stranded beta-helix
Superfamily:cAMP-binding domain-like
Family:cAMP-binding domain
59c1o5lA_
not modelled 99.4 17
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator, crp family;
PDBTitle: crystal structure of transcriptional regulator (tm1171) from2 thermotoga maritima at 2.30 a resolution
60d1o5la1
not modelled 99.4 17
Fold:Double-stranded beta-helix
Superfamily:cAMP-binding domain-like
Family:cAMP-binding domain
61d3e5ua2
not modelled 99.4 12
Fold:Double-stranded beta-helix
Superfamily:cAMP-binding domain-like
Family:cAMP-binding domain
62c3of1A_
not modelled 99.4 22
PDB header:transferase
Chain: A: PDB Molecule:camp-dependent protein kinase regulatory subunit;
PDBTitle: crystal structure of bcy1, the yeast regulatory subunit of pka
63d1zyba2
not modelled 99.4 12
Fold:Double-stranded beta-helix
Superfamily:cAMP-binding domain-like
Family:cAMP-binding domain
64d1cx4a1
not modelled 99.4 20
Fold:Double-stranded beta-helix
Superfamily:cAMP-binding domain-like
Family:cAMP-binding domain
65d1cx4a2
not modelled 99.4 20
Fold:Double-stranded beta-helix
Superfamily:cAMP-binding domain-like
Family:cAMP-binding domain
66c5v30B_
not modelled 99.4 19
PDB header:transcription
Chain: B: PDB Molecule:transcriptional regulator;
PDBTitle: crystal structure of the sensor domain of the transcriptional2 regulator hcpr from porphyromonas gingivalis
67c5v4sB_
not modelled 99.4 26
PDB header:transport protein
Chain: B: PDB Molecule:transporter, cation channel family / cyclic nucleotide-
PDBTitle: cryoem structure of a prokaryotic cyclic nucleotide-gated ion channel
68c3idcB_
not modelled 99.4 20
PDB header:transferase
Chain: B: PDB Molecule:camp-dependent protein kinase type ii-beta regulatory
PDBTitle: crystal structure of (102-265)riib:c holoenzyme of camp-dependent2 protein kinase
69c1o7fA_
not modelled 99.4 31
PDB header:regulation
Chain: A: PDB Molecule:camp-dependent rap1 guanine-nucleotide exchange
PDBTitle: crystal structure of the regulatory domain of epac2
70c5bv6A_
not modelled 99.4 18
PDB header:transferase
Chain: A: PDB Molecule:cgmp-dependent protein kinase 2;
PDBTitle: pkg ii's carboxyl terminal cyclic nucleotide binding domain (cnb-b) in2 a complex with cgmp
71c6ftfB_
not modelled 99.4 20
PDB header:signaling protein
Chain: B: PDB Molecule:protein kinase a regulatory subunit, putative;
PDBTitle: regulatory subunit of a camp-independent protein kinase a from2 trypanosoma cruzi at 1.09 a resolution
72c3mdpA_
not modelled 99.4 17
PDB header:nucleotide binding protein
Chain: A: PDB Molecule:cyclic nucleotide-binding domain (cnmp-bd) protein;
PDBTitle: crystal structure of a putative cyclic nucleotide-binding protein2 (gmet_1532) from geobacter metallireducens gs-15 at 1.90 a resolution
73c3iwzB_
not modelled 99.4 22
PDB header:transcription
Chain: B: PDB Molecule:catabolite activation-like protein;
PDBTitle: the c-di-gmp responsive global regulator clp links cell-cell signaling2 to virulence gene expression in xanthomonas campestris
74c3pvbB_
not modelled 99.4 24
PDB header:transferase
Chain: B: PDB Molecule:camp-dependent protein kinase type i-alpha regulatory
PDBTitle: crystal structure of (73-244)ria:c holoenzyme of camp-dependent2 protein kinase
75c3dn7A_
not modelled 99.4 13
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:cyclic nucleotide binding regulatory protein;
PDBTitle: cyclic nucleotide binding regulatory protein from cytophaga2 hutchinsonii.
76c5d1iB_
not modelled 99.3 22
PDB header:unknown function
Chain: B: PDB Molecule:cyclic nucleotide-binding protein;
PDBTitle: structure of cyclic nucleotide-binding-like protein from brucella2 abortus bv. 1 str. 9-941
77d1i5za2
not modelled 99.3 24
Fold:Double-stranded beta-helix
Superfamily:cAMP-binding domain-like
Family:cAMP-binding domain
78c5h3oA_
not modelled 99.3 28
PDB header:transport protein
Chain: A: PDB Molecule:cyclic nucleotide-gated cation channel;
PDBTitle: structure of a eukaryotic cyclic nucleotide-gated channel
79c3shrA_
not modelled 99.3 17
PDB header:transferase
Chain: A: PDB Molecule:cgmp-dependent protein kinase 1;
PDBTitle: crystal structure of cgmp-dependent protein kinase reveals novel site2 of interchain communication
80c3cf6E_
not modelled 99.3 25
PDB header:signaling protein/gtp-binding protein
Chain: E: PDB Molecule:rap guanine nucleotide exchange factor (gef) 4;
PDBTitle: structure of epac2 in complex with cyclic-amp and rap
81c3tnqA_
not modelled 99.3 22
PDB header:transferase
Chain: A: PDB Molecule:camp-dependent protein kinase type ii-beta regulatory
PDBTitle: structure and allostery of the pka riib tetrameric holoenzyme
82c1cx4A_
not modelled 99.3 18
PDB header:signaling protein
Chain: A: PDB Molecule:camp-dependent protein kinase regulatory subunit
PDBTitle: crystal structure of a deletion mutant of the type ii beta2 regulatory subunit of camp-dependent protein kinase
83c5u6pA_
not modelled 99.3 23
PDB header:transport protein
Chain: A: PDB Molecule:potassium/sodium hyperpolarization-activated cyclic
PDBTitle: structure of the human hcn1 hyperpolarization-activated cyclic2 nucleotide-gated ion channel in complex with camp
84c5kbfA_
not modelled 99.3 16
PDB header:transferase
Chain: A: PDB Molecule:camp-dependent protein kinase regulatory subunit, putative;
PDBTitle: camp bound pfpka-r (141-441)
85c5j3uA_
not modelled 99.3 21
PDB header:transferase
Chain: A: PDB Molecule:protein kinase a;
PDBTitle: co-crystal structure of the regulatory domain of toxoplasma gondii pka2 with camp
86c4ev0A_
not modelled 99.3 32
PDB header:transcription activator
Chain: A: PDB Molecule:transcription regulator, crp family;
PDBTitle: crystal structure of thermus thermophilus catabolite activator protein
87d1vp6a_
not modelled 99.3 25
Fold:Double-stranded beta-helix
Superfamily:cAMP-binding domain-like
Family:cAMP-binding domain
88c5t3nB_
not modelled 99.3 16
PDB header:transferase
Chain: B: PDB Molecule:camp-dependent protein kinase regulatory subunit;
PDBTitle: sp-2cl-camps bound to pkar cbd2
89c1rgsA_
not modelled 99.3 19
PDB header:kinase
Chain: A: PDB Molecule:camp dependent protein kinase;
PDBTitle: regulatory subunit of camp dependent protein kinase
90c6cjtB_
not modelled 99.3 28
PDB header:transport protein
Chain: B: PDB Molecule:sthk cyclic nucleotide-gated potassium channel;
PDBTitle: structure of the sthk cyclic nucleotide-gated potassium channel in2 complex with cgmp
91c4kg1A_
not modelled 99.3 29
PDB header:lyase
Chain: A: PDB Molecule:diguanylate cyclase;
PDBTitle: cgmp-responsive diguanylate cyclase
92d1ne6a1
not modelled 99.3 24
Fold:Double-stranded beta-helix
Superfamily:cAMP-binding domain-like
Family:cAMP-binding domain
93c2ptmA_
not modelled 99.3 16
PDB header:transport protein
Chain: A: PDB Molecule:hyperpolarization-activated (ih) channel;
PDBTitle: structure and rearrangements in the carboxy-terminal region of spih2 channels
94c3ogjD_
not modelled 99.2 24
PDB header:transferase
Chain: D: PDB Molecule:prkg1 protein;
PDBTitle: crystal structure of partial apo (92-227) of cgmp-dependent protein2 kinase
95c2bgcA_
not modelled 99.2 6
PDB header:transcription
Chain: A: PDB Molecule:prfa;
PDBTitle: prfa-g145s, a constitutive active mutant of the2 transcriptional regulator in l.monocytogenes
96d1wgpa_
not modelled 99.2 19
Fold:Double-stranded beta-helix
Superfamily:cAMP-binding domain-like
Family:cAMP-binding domain
97c2z69A_
not modelled 99.2 21
PDB header:transcription regulator
Chain: A: PDB Molecule:dnr protein;
PDBTitle: crystal structure of the sensor domain of the transcriptional2 regulator dnr from pseudomonas aeruginosa
98c3fx3A_
not modelled 99.2 18
PDB header:camp-binding protein
Chain: A: PDB Molecule:cyclic nucleotide-binding protein;
PDBTitle: structure of a putative camp-binding regulatory protein from2 silicibacter pomeroyi dss-3
99c4d7sB_
not modelled 99.2 27
PDB header:transport protein
Chain: B: PDB Molecule:sthk_cnbd_cgmp;
PDBTitle: structure of the sthk carboxy-terminal region in complex with cgmp
100c1zybA_
not modelled 99.2 12
PDB header:transcription regulator
Chain: A: PDB Molecule:transcription regulator, crp family;
PDBTitle: crystal structure of transcription regulator from bacteroides2 thetaiotaomicron vpi-5482 at 2.15 a resolution
101c5c8wB_
not modelled 99.2 23
PDB header:transferase
Chain: B: PDB Molecule:cgmp-dependent protein kinase 2;
PDBTitle: pkg ii's amino terminal cyclic nucleotide binding domain (cnb-a) in a2 complex with cgmp
102c3otfA_
not modelled 99.2 23
PDB header:transport protein
Chain: A: PDB Molecule:potassium/sodium hyperpolarization-activated cyclic
PDBTitle: structural basis for the camp-dependent gating in human hcn4 channel
103c5k7lA_
not modelled 99.2 30
PDB header:metal transport/calcium binding protein
Chain: A: PDB Molecule:potassium voltage-gated channel subfamily h member 1;
PDBTitle: single particle cryo-em structure of the voltage-gated k+ channel eag12 bound to the channel inhibitor calmodulin
104c3dv8A_
not modelled 99.2 14
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator, crp/fnr family;
PDBTitle: crystal structure of a putative transcriptional regulator of the2 crp/fnr family (eubrec_1222) from eubacterium rectale atcc 33656 at3 2.55 a resolution
105d1o7fa2
not modelled 99.2 27
Fold:Double-stranded beta-helix
Superfamily:cAMP-binding domain-like
Family:cAMP-binding domain
106c3e97A_
not modelled 99.2 27
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator, crp/fnr family;
PDBTitle: crystal structure of transcriptional regulator of crp/fnr family2 (yp_604437.1) from deinococcus geothermalis dsm 11300 at 1.86 a3 resolution
107c5va1A_
not modelled 99.1 27
PDB header:transport protein
Chain: A: PDB Molecule:potassium voltage-gated channel subfamily h member 2;
PDBTitle: cryo-em structure of the human ether-a-go-go related k+ channel
108c5w5aB_
not modelled 99.1 22
PDB header:transcription
Chain: B: PDB Molecule:hth-type transcriptional regulator cmr;
PDBTitle: crystal structure of mycobacterium tuberculosis crp-fnr family2 transcription factor cmr (rv1675c)
109c3kccA_
not modelled 99.1 23
PDB header:transcription
Chain: A: PDB Molecule:catabolite gene activator;
PDBTitle: crystal structure of d138l mutant of catabolite gene activator protein
110c3d0sA_
not modelled 99.1 21
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulatory protein;
PDBTitle: camp receptor protein from m.tuberculosis, camp-free form
111d1q3ea_
not modelled 99.1 22
Fold:Double-stranded beta-helix
Superfamily:cAMP-binding domain-like
Family:cAMP-binding domain
112c3la2A_
not modelled 99.1 17
PDB header:transcription
Chain: A: PDB Molecule:global nitrogen regulator;
PDBTitle: crystal structure of ntca in complex with 2-oxoglutarate
113c2zdbA_
not modelled 99.1 10
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator, crp family;
PDBTitle: crystal structure of tthb099, a transcriptional regulator crp family2 from thermus thermophilus hb8
114c1zreB_
not modelled 99.0 25
PDB header:gene regulation/dna
Chain: B: PDB Molecule:catabolite gene activator;
PDBTitle: 4 crystal structures of cap-dna with all base-pair substitutions at2 position 6, cap-[6g;17c]icap38 dna
115c3uknC_
not modelled 99.0 23
PDB header:transport protein, membrane protein
Chain: C: PDB Molecule:novel protein similar to vertebrate potassium voltage-gated
PDBTitle: structure of the c-linker/cnbhd of zelk channels in c 2 2 21 space2 group
116c4f8aA_
not modelled 99.0 31
PDB header:membrane protein, transport protein
Chain: A: PDB Molecule:potassium voltage-gated channel subfamily h member 1;
PDBTitle: cyclic nucleotide binding-homology domain from mouse eag1 potassium2 channel
117c3e6dA_
not modelled 99.0 11
PDB header:transcription regulation
Chain: A: PDB Molecule:cyclic nucleotide-binding protein;
PDBTitle: crystal structure of cprk c200s
118d1o7fa3
not modelled 99.0 28
Fold:Double-stranded beta-helix
Superfamily:cAMP-binding domain-like
Family:cAMP-binding domain
119c6hq7B_
not modelled 99.0 30
PDB header:signaling protein
Chain: B: PDB Molecule:eal enzyme bd1971;
PDBTitle: structure of eal enzyme bd1971 - cgmp bound form
120d1cjya2
not modelled 99.0 20
Fold:FabD/lysophospholipase-like
Superfamily:FabD/lysophospholipase-like
Family:Lysophospholipase

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below