Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3733c_(-)_4184190_4184690
DateFri Aug 9 18:20:43 BST 2019
Unique Job IDa1c0bb1066fb7072
SequenceMPKLSAGVLL ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:52.462 Y:51.278 Z:37.599
Model (left) based on template c3fjyB_
Top template information
PDB header:hydrolase
Chain: B: PDB Molecule:probable mutt1 protein;
PDBTitle: crystal structure of a probable mutt1 protein from bifidobacterium2 adolescentis
Confidence and coverage
Confidence: 99.9% Coverage: 89%
148 residues ( 89% of your sequence) have been modelled with 99.9% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3fjyB_



99.9 22
PDB header:hydrolase
Chain: B: PDB Molecule:probable mutt1 protein;
PDBTitle: crystal structure of a probable mutt1 protein from bifidobacterium2 adolescentis
2c5gg7A_



99.9 33
PDB header:hydrolase
Chain: A: PDB Molecule:hydrolase, nudix family protein;
PDBTitle: crystal structure of mycobacterium smegmatis mutt1 in complex with 8-2 oxo-dgtp, 8-oxo-dgmp and pyrophosphate (i)
3d1ktga_



99.9 23
Fold:Nudix
Superfamily:Nudix
Family:MutT-like
4d1xsba_



99.9 19
Fold:Nudix
Superfamily:Nudix
Family:MutT-like
5c4dywA_



99.9 20
PDB header:hydrolase
Chain: A: PDB Molecule:mutt/nudix family protein;
PDBTitle: crystal structure of mutt nudix hydrolase from burkholderia2 pseudomallei
6c3sonB_



99.9 16
PDB header:hydrolase
Chain: B: PDB Molecule:hypothetical nudix hydrolase;
PDBTitle: crystal structure of a putativel nudix hydrolase (lmof2365_2679) from2 listeria monocytogenes str. 4b f2365 at 1.70 a resolution
7d2b0va1



99.9 17
Fold:Nudix
Superfamily:Nudix
Family:MutT-like
8c3gz8C_



99.9 16
PDB header:dna binding protein
Chain: C: PDB Molecule:mutt/nudix family protein;
PDBTitle: cocrystal structure of nudix domain of shewanella oneidensis nrtr2 complexed with adp ribose
9c2kdvA_



99.9 19
PDB header:hydrolase
Chain: A: PDB Molecule:rna pyrophosphohydrolase;
PDBTitle: solution structure of rna pyrophosphohydrolase rpph from2 escherichia coli
10c3dkuB_



99.8 16
PDB header:hydrolase
Chain: B: PDB Molecule:putative phosphohydrolase;
PDBTitle: crystal structure of nudix hydrolase orf153, ymfb, from escherichia2 coli k-1
11c5cfiC_



99.8 18
PDB header:hydrolase
Chain: C: PDB Molecule:bis(5'-nucleosyl)-tetraphosphatase (diadenosine
PDBTitle: structural and functional attributes of malaria parasite ap4a2 hydrolase
12d2fb1a2



99.8 16
Fold:Nudix
Superfamily:Nudix
Family:BT0354 N-terminal domain-like
13c2pq1B_



99.8 28
PDB header:hydrolase
Chain: B: PDB Molecule:ap4a hydrolase;
PDBTitle: crystal structure of ap4a hydrolase complexed with amp and2 atp (aq_158) from aquifex aeolicus vf5
14c5gp0F_



99.8 16
PDB header:hydrolase
Chain: F: PDB Molecule:nudix hydrolase 1;
PDBTitle: crystal structure of geraniol-nudx1 complex
15c5bonC_



99.8 18
PDB header:hydrolase
Chain: C: PDB Molecule:probable 8-oxo-dgtp diphosphatase nudt15;
PDBTitle: crystal structure of human nudt15 (mth2)
16c2o1cB_



99.8 21
PDB header:hydrolase
Chain: B: PDB Molecule:datp pyrophosphohydrolase;
PDBTitle: structure of the e. coli dihydroneopterin triphosphate2 pyrophosphohydrolase
17c3fcmA_



99.8 15
PDB header:hydrolase
Chain: A: PDB Molecule:hydrolase, nudix family;
PDBTitle: crystal structure of a nudix hydrolase from clostridium perfringens
18d1jkna_



99.8 22
Fold:Nudix
Superfamily:Nudix
Family:MutT-like
19c2fvvA_



99.8 19
PDB header:hydrolase
Chain: A: PDB Molecule:diphosphoinositol polyphosphate phosphohydrolase 1;
PDBTitle: human diphosphoinositol polyphosphate phosphohydrolase 1
20d2fvva1



99.8 19
Fold:Nudix
Superfamily:Nudix
Family:MutT-like
21c4ilqA_



not modelled 99.8 20
PDB header:hydrolase
Chain: A: PDB Molecule:ct771;
PDBTitle: 2.60a resolution structure of ct771 from chlamydia trachomatis
22d1vcda1



not modelled 99.8 26
Fold:Nudix
Superfamily:Nudix
Family:MutT-like
23c4kyxA_



not modelled 99.8 16
PDB header:hydrolase
Chain: A: PDB Molecule:adp-ribose pyrophosphatase mutt;
PDBTitle: crystal structure of adp-ribose pyrophosphatase mutt from rickettsia2 felis
24c3q4iA_



not modelled 99.8 17
PDB header:hydrolase
Chain: A: PDB Molecule:phosphohydrolase (mutt/nudix family protein);
PDBTitle: crystal structure of cdp-chase in complex with gd3+
25d1sjya_



not modelled 99.8 27
Fold:Nudix
Superfamily:Nudix
Family:MutT-like
26c2gb5B_



not modelled 99.8 18
PDB header:hydrolase
Chain: B: PDB Molecule:nadh pyrophosphatase;
PDBTitle: crystal structure of nadh pyrophosphatase (ec 3.6.1.22) (1790429) from2 escherichia coli k12 at 2.30 a resolution
27c2yyhC_



not modelled 99.8 19
PDB header:hydrolase
Chain: C: PDB Molecule:8-oxo-dgtpase domain;
PDBTitle: crystal structure of nudix family protein from aquifex aeolicus
28c2fb1A_



not modelled 99.8 16
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:conserved hypothetical protein;
PDBTitle: crystal structure of protein bt0354 from bacteroides thetaiotaomicron
29d2azwa1



not modelled 99.8 18
Fold:Nudix
Superfamily:Nudix
Family:MutT-like
30d1ryaa_



not modelled 99.8 17
Fold:Nudix
Superfamily:Nudix
Family:GDP-mannose mannosyl hydrolase NudD
31c3i9xA_



not modelled 99.8 16
PDB header:hydrolase
Chain: A: PDB Molecule:mutt/nudix family protein;
PDBTitle: crystal structure of a mutt/nudix family protein from listeria innocua
32c3gwyA_



not modelled 99.8 12
PDB header:hydrolase
Chain: A: PDB Molecule:putative ctp pyrophosphohydrolase;
PDBTitle: crystal structure of putative ctp pyrophosphohydrolase from2 bacteroides fragilis
33c3gz6A_



not modelled 99.8 16
PDB header:dna binding protein/dna
Chain: A: PDB Molecule:mutt/nudix family protein;
PDBTitle: crystal structure of shewanella oneidensis nrtr complexed with a 27mer2 dna
34c6o3pA_



not modelled 99.8 19
PDB header:hydrolase
Chain: A: PDB Molecule:peroxisomal nadh pyrophosphatase nudt12;
PDBTitle: crystal structure of the catalytic domain of mouse nudt12 in complex2 with amp and 3 mg2+ ions
35c4hfqB_



not modelled 99.8 13
PDB header:hydrolase
Chain: B: PDB Molecule:mutt/nudix family protein;
PDBTitle: crystal structure of udp-x diphosphatase
36c3n77B_



not modelled 99.8 20
PDB header:hydrolase
Chain: B: PDB Molecule:nucleoside triphosphatase nudi;
PDBTitle: crystal structure of idp01880, putative ntp pyrophosphohydrolase of2 salmonella typhimurium lt2
37c5mp0D_



not modelled 99.8 21
PDB header:hydrolase
Chain: D: PDB Molecule:m7gpppn-mrna hydrolase;
PDBTitle: human m7gpppn-mrna hydrolase (dcp2, nudt20) catalytic domain
38c2rrkA_



not modelled 99.8 22
PDB header:hydrolase
Chain: A: PDB Molecule:ctp pyrophosphohydrolase;
PDBTitle: solution structure of the e. coli orf135 protein
39c3cngC_



not modelled 99.8 22
PDB header:hydrolase
Chain: C: PDB Molecule:nudix hydrolase;
PDBTitle: crystal structure of nudix hydrolase from nitrosomonas europaea
40c5zrhA_



not modelled 99.8 21
PDB header:hydrolase
Chain: A: PDB Molecule:putative mutator protein mutt2/nudix hydrolase;
PDBTitle: m. smegmatis antimutator protein mutt2 in complex with cmp
41c5lopA_



not modelled 99.8 20
PDB header:rna binding protein
Chain: A: PDB Molecule:klla0f23980p;
PDBTitle: structure of the active form of /k. lactis/ dcp1-dcp2-edc3 decapping2 complex bound to m7gdp
42d2fmla2



not modelled 99.8 21
Fold:Nudix
Superfamily:Nudix
Family:BT0354 N-terminal domain-like
43d1vk6a2



not modelled 99.8 18
Fold:Nudix
Superfamily:Nudix
Family:NADH pyrophosphatase
44c3o8sA_



not modelled 99.8 21
PDB header:hydrolase
Chain: A: PDB Molecule:adp-ribose pyrophosphatase;
PDBTitle: crystal structure of an adp-ribose pyrophosphatase (ssu98_1448) from2 streptococcus suis 89-1591 at 2.27 a resolution
45c2qjoB_



not modelled 99.8 16
PDB header:transferase, hydrolase
Chain: B: PDB Molecule:bifunctional nmn adenylyltransferase/nudix hydrolase;
PDBTitle: crystal structure of a bifunctional nmn adenylyltransferase/adp ribose2 pyrophosphatase (nadm) complexed with adprp and nad from3 synechocystis sp.
46c3grnB_



not modelled 99.8 21
PDB header:hydrolase
Chain: B: PDB Molecule:mutt related protein;
PDBTitle: crystal structure of mutt protein from methanosarcina mazei go1
47d2b06a1



not modelled 99.8 19
Fold:Nudix
Superfamily:Nudix
Family:MutT-like
48c2jvbA_



not modelled 99.8 22
PDB header:hydrolase
Chain: A: PDB Molecule:mrna-decapping enzyme subunit 2;
PDBTitle: solution structure of catalytic domain of ydcp2
49c2r5wA_



not modelled 99.8 15
PDB header:hydrolase, transferase
Chain: A: PDB Molecule:nicotinamide-nucleotide adenylyltransferase;
PDBTitle: crystal structure of a bifunctional nmn2 adenylyltransferase/adp ribose pyrophosphatase from3 francisella tularensis
50d1k2ea_



not modelled 99.8 19
Fold:Nudix
Superfamily:Nudix
Family:MutT-like
51c3r03B_



not modelled 99.8 23
PDB header:hydrolase
Chain: B: PDB Molecule:nudix hydrolase;
PDBTitle: the crystal structure of nudix hydrolase from rhodospirillum rubrum
52c3f6aA_



not modelled 99.8 16
PDB header:hydrolase
Chain: A: PDB Molecule:hydrolase, nudix family;
PDBTitle: crystal structure of a hydrolase, nudix family from2 clostridium perfringens
53d2fkba1



not modelled 99.8 15
Fold:Nudix
Superfamily:Nudix
Family:IPP isomerase-like
54c4v14A_



not modelled 99.7 18
PDB header:hydrolase
Chain: A: PDB Molecule:mutator mutt protein;
PDBTitle: structure and function analysis of mutt from the2 psychrofile fish pathogen aliivibrio salmonicida and the3 mesophile vibrio cholerae
55c3fk9B_



not modelled 99.7 18
PDB header:hydrolase
Chain: B: PDB Molecule:mutator mutt protein;
PDBTitle: crystal structure of mmutator mutt protein from bacillus halodurans
56c3hhjA_



not modelled 99.7 17
PDB header:hydrolase
Chain: A: PDB Molecule:mutator mutt protein;
PDBTitle: crystal structure of mutator mutt from bartonella henselae
57d1puna_



not modelled 99.7 17
Fold:Nudix
Superfamily:Nudix
Family:MutT-like
58c2qkmF_



not modelled 99.7 20
PDB header:hydrolase
Chain: F: PDB Molecule:spac19a8.12 protein;
PDBTitle: the crystal structure of fission yeast mrna decapping enzyme dcp1-dcp22 complex
59c2fmlB_



not modelled 99.7 22
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:mutt/nudix family protein;
PDBTitle: crystal structure of mutt/nudix family protein from enterococcus2 faecalis
60d1irya_



not modelled 99.7 24
Fold:Nudix
Superfamily:Nudix
Family:MutT-like
61c3h95A_



not modelled 99.7 17
PDB header:gene regulation
Chain: A: PDB Molecule:nucleoside diphosphate-linked moiety x motif 6;
PDBTitle: crystal structure of the nudix domain of nudt6
62d1nqza_



not modelled 99.7 25
Fold:Nudix
Superfamily:Nudix
Family:MutT-like
63c5lf8A_



not modelled 99.7 17
PDB header:hydrolase
Chain: A: PDB Molecule:nucleoside diphosphate-linked moiety x motif 17;
PDBTitle: human nucleoside diphosphate-linked moiety x motif 17 (nudt17)
64c3ef5A_



not modelled 99.7 20
PDB header:hydrolase
Chain: A: PDB Molecule:probable pyrophosphohydrolase;
PDBTitle: structure of the rna pyrophosphohydrolase bdrpph in complex with dgtp
65d2a6ta2



not modelled 99.7 21
Fold:Nudix
Superfamily:Nudix
Family:mRNA decapping enzyme-like
66c3id9B_



not modelled 99.7 18
PDB header:hydrolase
Chain: B: PDB Molecule:mutt/nudix family protein;
PDBTitle: crystal structure of a mutt/nudix family protein from2 bacillus thuringiensis
67c4zbpC_



not modelled 99.7 17
PDB header:hydrolase
Chain: C: PDB Molecule:nudix hydrolase 7;
PDBTitle: crystal structure of the ampcpr-bound atnudt7
68c3gg6A_



not modelled 99.7 17
PDB header:hydrolase
Chain: A: PDB Molecule:nucleoside diphosphate-linked moiety x motif 18;
PDBTitle: crystal structure of the nudix domain of human nudt18
69c3qsjA_



not modelled 99.7 25
PDB header:hydrolase
Chain: A: PDB Molecule:nudix hydrolase;
PDBTitle: crystal structure of nudix hydrolase from alicyclobacillus2 acidocaldarius
70c3exqA_



not modelled 99.7 20
PDB header:hydrolase
Chain: A: PDB Molecule:nudix family hydrolase;
PDBTitle: crystal structure of a nudix family hydrolase from2 lactobacillus brevis
71d1q33a_



not modelled 99.7 21
Fold:Nudix
Superfamily:Nudix
Family:MutT-like
72c5x1xA_



not modelled 99.7 17
PDB header:hydrolase
Chain: A: PDB Molecule:mutator mutt protein;
PDBTitle: solution nmr structure of dna mismatch repair protein mutt (family2 nudix hydrolase) from methicillin resistant staphylococcus aureus 252
73c3f13A_



not modelled 99.7 22
PDB header:hydrolase
Chain: A: PDB Molecule:putative nudix hydrolase family member;
PDBTitle: crystal structure of putative nudix hydrolase family member from2 chromobacterium violaceum
74c2pqvA_



not modelled 99.7 14
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:mutt/nudix family protein;
PDBTitle: crystal structure of mutt/nudix family protein from streptococcus2 pneumoniae
75c5c7tB_



not modelled 99.7 15
PDB header:hydrolase
Chain: B: PDB Molecule:nudf protein;
PDBTitle: crystal structure of the bdellovibrio bacteriovorus nucleoside2 diphosphate sugar hydrolase in complex with adp-ribose
76d2o5fa1



not modelled 99.7 15
Fold:Nudix
Superfamily:Nudix
Family:IPP isomerase-like
77d1ppva_



not modelled 99.7 16
Fold:Nudix
Superfamily:Nudix
Family:IPP isomerase-like
78d1hzta_



not modelled 99.7 16
Fold:Nudix
Superfamily:Nudix
Family:IPP isomerase-like
79c3rh7A_



not modelled 99.6 20
PDB header:oxidoreductase
Chain: A: PDB Molecule:hypothetical oxidoreductase;
PDBTitle: crystal structure of a putative oxidoreductase (sma0793) from2 sinorhizobium meliloti 1021 at 3.00 a resolution
80c3edsA_



not modelled 99.6 20
PDB header:hydrolase
Chain: A: PDB Molecule:mutt/nudix family protein;
PDBTitle: crystal structure of a mut/nudix family protein from bacillus2 thuringiensis
81c2yvoA_



not modelled 99.6 23
PDB header:hydrolase
Chain: A: PDB Molecule:mutt/nudix family protein;
PDBTitle: crystal structure of ndx2 in complex with mg2+ and amp from thermus2 thermophilus hb8
82c2w4eA_



not modelled 99.6 20
PDB header:hydrolase
Chain: A: PDB Molecule:mutt/nudix family protein;
PDBTitle: structure of an n-terminally truncated nudix hydrolase2 dr2204 from deinococcus radiodurans
83d1vhza_



not modelled 99.6 17
Fold:Nudix
Superfamily:Nudix
Family:MutT-like
84d1v8ya_



not modelled 99.6 26
Fold:Nudix
Superfamily:Nudix
Family:MutT-like
85d1g0sa_



not modelled 99.6 24
Fold:Nudix
Superfamily:Nudix
Family:MutT-like
86c3bm4B_



not modelled 99.6 18
PDB header:hydrolase
Chain: B: PDB Molecule:adp-sugar pyrophosphatase;
PDBTitle: crystal structure of human adp-ribose pyrophosphatase nudt5 in complex2 with magnesium and ampcpr
87c4jztA_



not modelled 99.6 18
PDB header:hydrolase
Chain: A: PDB Molecule:dgtp pyrophosphohydrolase;
PDBTitle: crystal structure of the bacillus subtilis pyrophosphohydrolase bsrpph2 (e68a mutant) bound to gtp
88c5t3pB_



not modelled 99.6 22
PDB header:hydrolase
Chain: B: PDB Molecule:peroxisomal coenzyme a diphosphatase nudt7;
PDBTitle: crystal structure of human peroxisomal coenzyme a diphosphatase nudt7
89d1x51a1



not modelled 99.5 13
Fold:Nudix
Superfamily:Nudix
Family:MutY C-terminal domain-like
90c3q91D_



not modelled 99.5 19
PDB header:hydrolase
Chain: D: PDB Molecule:uridine diphosphate glucose pyrophosphatase;
PDBTitle: crystal structure of human uridine diphosphate glucose pyrophosphatase2 (nudt14)
91d1mqea_



not modelled 99.5 22
Fold:Nudix
Superfamily:Nudix
Family:MutT-like
92d1u20a1



not modelled 99.4 18
Fold:Nudix
Superfamily:Nudix
Family:MutT-like
93d1viua_



not modelled 99.4 19
Fold:Nudix
Superfamily:Nudix
Family:MutT-like
94c3e57A_



not modelled 99.4 10
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein tm1382;
PDBTitle: crystal structure of tm1382, a putative nudix hydrolase
95c1rrqA_



not modelled 99.4 16
PDB header:hydrolase/dna
Chain: A: PDB Molecule:muty;
PDBTitle: muty adenine glycosylase in complex with dna containing an2 a:oxog pair
96d1rrqa2



not modelled 99.3 14
Fold:Nudix
Superfamily:Nudix
Family:MutY C-terminal domain-like
97c2j8qB_



not modelled 99.3 18
PDB header:nuclear protein
Chain: B: PDB Molecule:cleavage and polyadenylation specificity factor 5;
PDBTitle: crystal structure of human cleavage and polyadenylation2 specificity factor 5 (cpsf5) in complex with a sulphate3 ion.
98c4v1aj_



not modelled 99.3 15
PDB header:ribosome
Chain: J: PDB Molecule:
PDBTitle: structure of the large subunit of the mammalian mitoribosome, part 22 of 2
99c3dupB_



not modelled 99.3 10
PDB header:hydrolase
Chain: B: PDB Molecule:mutt/nudix family protein;
PDBTitle: crystal structure of mutt/nudix family hydrolase from rhodospirillum2 rubrum atcc 11170
100c2i6kA_



not modelled 99.2 12
PDB header:isomerase
Chain: A: PDB Molecule:isopentenyl-diphosphate delta-isomerase 1;
PDBTitle: crystal structure of human type i ipp isomerase complexed with a2 substrate analog
101c2pnyA_



not modelled 99.0 13
PDB header:isomerase
Chain: A: PDB Molecule:isopentenyl-diphosphate delta-isomerase 2;
PDBTitle: structure of human isopentenyl-diphosphate delta-isomerase 2
102c5lf9A_



not modelled 99.0 17
PDB header:transferase
Chain: A: PDB Molecule:nucleoside diphosphate-linked moiety x motif 22;
PDBTitle: crystal structure of human nudt22
103c3couA_



not modelled 98.4 24
PDB header:hydrolase
Chain: A: PDB Molecule:nucleoside diphosphate-linked moiety x motif 16;
PDBTitle: crystal structure of human nudix motif 16 (nudt16)
104c3kvhA_



not modelled 97.6 21
PDB header:rna binding protein
Chain: A: PDB Molecule:protein syndesmos;
PDBTitle: crystal structure of human protein syndesmos (nudt16-like protein)
105c1vw46_



not modelled 97.4 20
PDB header:ribosome
Chain: 6: PDB Molecule:54s ribosomal protein l17, mitochondrial;
PDBTitle: structure of the yeast mitochondrial large ribosomal subunit
106c6drkD_



not modelled 97.3 19
PDB header:transport protein
Chain: D: PDB Molecule:transient receptor potential cation channel, subfamily m,
PDBTitle: structure of trpm2 ion channel receptor by single particle electron2 cryo-microscopy, apo state
107c3p5tE_



not modelled 97.0 23
PDB header:rna binding protein
Chain: E: PDB Molecule:cleavage and polyadenylation specificity factor subunit 5;
PDBTitle: cfim25-cfim68 complex
108c6mizC_



not modelled 96.4 16
PDB header:membrane protein
Chain: C: PDB Molecule:transient receptor potential cation channel subfamily m
PDBTitle: human trpm2 ion channel in an adpr-bound state
109c6d73B_



not modelled 94.1 23
PDB header:transport protein
Chain: B: PDB Molecule:transient receptor potential cation channel, subfamily m;
PDBTitle: cryo-em structure of the zebrafish trpm2 channel in the presence of2 ca2+
110c4ktbA_



not modelled 88.1 17
PDB header:unknown function
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: the crystal structure of posible asymmetric diadenosine tetraphosphate2 (ap(4)a) hydrolases from jonesia denitrificans dsm 20603
111c6d73C_



not modelled 81.7 12
PDB header:transport protein
Chain: C: PDB Molecule:transient receptor potential cation channel, subfamily m;
PDBTitle: cryo-em structure of the zebrafish trpm2 channel in the presence of2 ca2+

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