Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3734c_(-)_4184704_4186068
DateFri Aug 9 18:20:43 BST 2019
Unique Job IDc38ea0de8af49aa4
SequenceMDLMMPNDSM ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:69.063 Y:46.926 Z:66.619
Model (left) based on template c6chjB_
Top template information
PDB header:transferase
Chain: B: PDB Molecule:diacylglycerol o-acyltransferase;
PDBTitle: wax ester synthase/diacylglycerol acyltransferase from marinobacter2 aquaeolei vt8
Confidence and coverage
Confidence:100.0% Coverage: 91%
411 residues ( 91% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in JSmol
For other options to view your downloaded structure offline see the FAQ

Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c6chjB_



100.0 43
PDB header:transferase
Chain: B: PDB Molecule:diacylglycerol o-acyltransferase;
PDBTitle: wax ester synthase/diacylglycerol acyltransferase from marinobacter2 aquaeolei vt8
2c6n8eA_



100.0 11
PDB header:hydrolase
Chain: A: PDB Molecule:holo-obif1;
PDBTitle: crystal structure of holo-obif1, a five domain nonribosomal peptide2 synthetase from burkholderia diffusa
3c2vsqA_



100.0 12
PDB header:ligase
Chain: A: PDB Molecule:surfactin synthetase subunit 3;
PDBTitle: structure of surfactin a synthetase c (srfa-c), a nonribosomal peptide2 synthetase termination module
4c6aefB_



100.0 12
PDB header:transferase
Chain: B: PDB Molecule:polyketide synthase associated protein papa2;
PDBTitle: papa2 acyl transferase
5c5t81A_



100.0 14
PDB header:biosynthetic protein
Chain: A: PDB Molecule:epob;
PDBTitle: rhombohedral crystal form of the epob nrps cyclization-docking2 bidomain from sorangium cellulosum
6c5m6pB_



100.0 13
PDB header:isomerase
Chain: B: PDB Molecule:tyrocidine synthase 2;
PDBTitle: crystal structure of the epimerization domain from module 3 of2 tyrocidine synthetase b, tycb3(e)
7c4zxiA_



100.0 14
PDB header:biosynthetic protein
Chain: A: PDB Molecule:tyrocidine synthetase 3;
PDBTitle: crystal structure of holo-ab3403 a four domain nonribosomal peptide2 synthetase bound to amp and glycine
8c5u89A_



100.0 14
PDB header:hydrolase/inhibitor
Chain: A: PDB Molecule:amino acid adenylation domain protein;
PDBTitle: crystal structure of a cross-module fragment from the dimodular nrps2 dhbf
9c5t3eA_



100.0 10
PDB header:ligase
Chain: A: PDB Molecule:bacillamide synthetase heterocyclization domain;
PDBTitle: crystal structure of a nonribosomal peptide synthetase2 heterocyclization domain.
10c2xhgA_



100.0 14
PDB header:isomerase
Chain: A: PDB Molecule:tyrocidine synthetase a;
PDBTitle: crystal structure of the epimerization domain from the initiation2 module of tyrocidine biosynthesis
11c4znmB_



100.0 13
PDB header:ligase
Chain: B: PDB Molecule:c-domain type ii peptide synthetase;
PDBTitle: crystal structure of sgcc5 protein from streptomyces globisporus (apo2 form)
12c6p1jA_



100.0 15
PDB header:biosynthetic protein
Chain: A: PDB Molecule:txo2;
PDBTitle: the structure of condensation and adenylation domains of teixobactin-2 producing nonribosomal peptide synthetase txo2 serine module
13c6ad3A_



100.0 11
PDB header:biosynthetic protein
Chain: A: PDB Molecule:lovastatin nonaketide synthase moka;
PDBTitle: structural characterization of the condensation domain from monacolin2 k polyketide synthase moka
14c6cgoB_



100.0 14
PDB header:biosynthetic protein
Chain: B: PDB Molecule:condensation domain protein;
PDBTitle: molecular basis for condensation domain-mediated chain release from2 the enacyloxin polyketide synthase
15c4zxjA_



100.0 13
PDB header:biosynthetic protein
Chain: A: PDB Molecule:enterobactin synthase component f;
PDBTitle: crystal structure of holo-entf a nonribosomal peptide synthetase in2 the thioester-forming conformation
16c6m7lB_



100.0 14
PDB header:biosynthetic protein
Chain: B: PDB Molecule:putative non-ribosomal peptide synthetase;
PDBTitle: complex of oxya with the x-domain from gpa biosynthesis
17c4jn3B_



100.0 16
PDB header:biosynthetic protein
Chain: B: PDB Molecule:cda peptide synthetase i;
PDBTitle: crystal structures of the first condensation domain of the cda2 synthetase
18c2jgpA_



100.0 13
PDB header:ligase
Chain: A: PDB Molecule:tyrocidine synthetase 3;
PDBTitle: structure of the tycc5-6 pcp-c bidomain of the tyrocidine synthetase2 tycc
19c5ja2A_



100.0 14
PDB header:ligase
Chain: A: PDB Molecule:enterobactin synthase component f;
PDBTitle: entf, a terminal nonribosomal peptide synthetase module bound to the2 non-native mbth-like protein pa2412
20c4tx3B_



100.0 13
PDB header:oxidoreductase
Chain: B: PDB Molecule:peptide synthetase, module 7;
PDBTitle: complex of the x-domain and oxyb from teicoplanin biosynthesis
21c6ozvA_



not modelled 100.0 17
PDB header:biosynthetic protein
Chain: A: PDB Molecule:txo1;
PDBTitle: the structure of condensation and adenylation domains of teixobactin-2 producing nonribosomal peptide synthetase txo1 serine module in3 complex with amp
22c1l5aA_



not modelled 100.0 14
PDB header:biosynthetic protein
Chain: A: PDB Molecule:amide synthase;
PDBTitle: crystal structure of vibh, an nrps condensation enzyme
23c5dijA_



not modelled 100.0 11
PDB header:unknown function
Chain: A: PDB Molecule:tqaa;
PDBTitle: the crystal structure of ct
24c1q9jA_



not modelled 100.0 14
PDB header:ligase
Chain: A: PDB Molecule:polyketide synthase associated protein 5;
PDBTitle: structure of polyketide synthase associated protein 5 from2 mycobacterium tuberculosis
25c4hvmC_



not modelled 100.0 12
PDB header:biosynthetic protein
Chain: C: PDB Molecule:tlmii;
PDBTitle: crystal structure of tallysomycin biosynthesis protein tlmii
26c3fotA_



not modelled 100.0 10
PDB header:transferase
Chain: A: PDB Molecule:15-o-acetyltransferase;
PDBTitle: structural and functional characterization of tri3 trichothecene 15-o-2 acetyltransferase from fusarium sporotrichioides
27c6dd2A_



not modelled 99.9 11
PDB header:transferase
Chain: A: PDB Molecule:probable hydroxycinnamoyl transferase;
PDBTitle: crystal structure of selaginella moellendorffii hct
28c4g0bA_



not modelled 99.9 11
PDB header:transferase
Chain: A: PDB Molecule:hydroxycinnamoyl-coa shikimate/quinate
PDBTitle: structure of native hct from coffea canephora
29d1l5aa1



not modelled 99.9 13
Fold:CoA-dependent acyltransferases
Superfamily:CoA-dependent acyltransferases
Family:NRPS condensation domain (amide synthase)
30c2e1uA_



not modelled 99.9 15
PDB header:transferase
Chain: A: PDB Molecule:acyl transferase;
PDBTitle: crystal structure of dendranthema morifolium dmat
31d1q9ja1



not modelled 99.8 15
Fold:CoA-dependent acyltransferases
Superfamily:CoA-dependent acyltransferases
Family:NRPS condensation domain (amide synthase)
32d1l5aa2



not modelled 99.8 13
Fold:CoA-dependent acyltransferases
Superfamily:CoA-dependent acyltransferases
Family:NRPS condensation domain (amide synthase)
33d1q9ja2



not modelled 99.8 10
Fold:CoA-dependent acyltransferases
Superfamily:CoA-dependent acyltransferases
Family:NRPS condensation domain (amide synthase)
34c2xr7A_



not modelled 99.8 9
PDB header:transferase
Chain: A: PDB Molecule:malonyltransferase;
PDBTitle: crystal structure of nicotiana tabacum malonyltransferase (ntmat1)2 complexed with malonyl-coa
35c2bghA_



not modelled 99.8 10
PDB header:transferase
Chain: A: PDB Molecule:vinorine synthase;
PDBTitle: crystal structure of vinorine synthase
36c4ke4A_



not modelled 99.6 13
PDB header:transferase
Chain: A: PDB Molecule:hydroxycinnamoyl-coa:shikimate hydroxycinnamoyl
PDBTitle: elucidation of the structure and reaction mechanism of sorghum bicolor2 hydroxycinnamoyltransferase and its structural relationship to other3 coa-dependent transferases and synthases
37c3b2sA_



not modelled 99.5 12
PDB header:transferase
Chain: A: PDB Molecule:trichothecene 3-o-acetyltransferase;
PDBTitle: crystal structure of f. graminearum tri101 complexed with coenzyme a2 and deoxynivalenol
38c2zbaD_



not modelled 99.2 11
PDB header:transferase
Chain: D: PDB Molecule:trichothecene 3-o-acetyltransferase;
PDBTitle: crystal structure of f. sporotrichioides tri101 complexed with2 coenzyme a and t-2
39c6eqoB_



not modelled 98.6 9
PDB header:oxidoreductase
Chain: B: PDB Molecule:acetyl-coenzyme a synthetase;
PDBTitle: tri-functional propionyl-coa synthase of erythrobacter sp. nap1 with2 bound nadp+ and phosphomethylphosphonic acid adenylate ester
40c2fy2A_



not modelled 96.6 11
PDB header:transferase
Chain: A: PDB Molecule:choline o-acetyltransferase;
PDBTitle: structures of ligand bound human choline acetyltransferase provide2 insight into regulation of acetylcholine synthesis
41c1q6xA_



not modelled 94.3 11
PDB header:transferase
Chain: A: PDB Molecule:choline o-acetyltransferase;
PDBTitle: crystal structure of rat choline acetyltransferase
42c1xl8B_



not modelled 93.5 11
PDB header:transferase
Chain: B: PDB Molecule:peroxisomal carnitine o-octanoyltransferase;
PDBTitle: crystal structure of mouse carnitine octanoyltransferase in2 complex with octanoylcarnitine
43c1t7qA_



not modelled 92.5 12
PDB header:transferase
Chain: A: PDB Molecule:carnitine acetyltransferase;
PDBTitle: crystal structure of the f565a mutant of murine carnitine2 acetyltransferase in complex with carnitine and coa
44d1ndba2



not modelled 91.3 12
Fold:CoA-dependent acyltransferases
Superfamily:CoA-dependent acyltransferases
Family:Choline/Carnitine O-acyltransferase
45d1xl7a2



not modelled 90.0 9
Fold:CoA-dependent acyltransferases
Superfamily:CoA-dependent acyltransferases
Family:Choline/Carnitine O-acyltransferase
46d1t1ua2



not modelled 89.6 9
Fold:CoA-dependent acyltransferases
Superfamily:CoA-dependent acyltransferases
Family:Choline/Carnitine O-acyltransferase
47d1nm8a2



not modelled 89.4 13
Fold:CoA-dependent acyltransferases
Superfamily:CoA-dependent acyltransferases
Family:Choline/Carnitine O-acyltransferase
48c2fyoA_



not modelled 88.0 12
PDB header:transferase
Chain: A: PDB Molecule:carnitine o-palmitoyltransferase ii, mitochondrial;
PDBTitle: crystal structure of rat carnitine palmitoyltransferase 2 in space2 group p43212
49c5es8A_



not modelled 86.8 6
PDB header:ligase
Chain: A: PDB Molecule:linear gramicidin synthetase subunit a;
PDBTitle: crystal structure of the initiation module of lgra in the thiolation2 state
50c2i9dC_



not modelled 85.7 17
PDB header:transferase
Chain: C: PDB Molecule:chloramphenicol acetyltransferase;
PDBTitle: chloramphenicol acetyltransferase
51c3maeA_



not modelled 78.3 17
PDB header:transferase
Chain: A: PDB Molecule:2-oxoisovalerate dehydrogenase e2 component,
PDBTitle: crystal structure of probable dihydrolipoamide acetyltransferase from2 listeria monocytogenes 4b f2365
52c2h4tB_



not modelled 76.5 10
PDB header:transferase
Chain: B: PDB Molecule:carnitine o-palmitoyltransferase ii, mitochondrial;
PDBTitle: crystal structure of rat carnitine palmitoyltransferase ii
53d1q23a_



not modelled 75.2 12
Fold:CoA-dependent acyltransferases
Superfamily:CoA-dependent acyltransferases
Family:CAT-like
54c3rqcB_



not modelled 74.1 23
PDB header:transferase
Chain: B: PDB Molecule:probable lipoamide acyltransferase;
PDBTitle: crystal structure of the catalytic core of the 2-oxoacid dehydrogenase2 multienzyme complex from thermoplasma acidophilum
55d1scza_



not modelled 64.6 20
Fold:CoA-dependent acyltransferases
Superfamily:CoA-dependent acyltransferases
Family:CAT-like
56c3b8kA_



not modelled 54.8 18
PDB header:transferase
Chain: A: PDB Molecule:dihydrolipoyllysine-residue acetyltransferase;
PDBTitle: structure of the truncated human dihydrolipoyl acetyltransferase (e2)
57d3claa_



not modelled 54.1 10
Fold:CoA-dependent acyltransferases
Superfamily:CoA-dependent acyltransferases
Family:CAT-like
58d1dpba_



not modelled 53.9 17
Fold:CoA-dependent acyltransferases
Superfamily:CoA-dependent acyltransferases
Family:CAT-like
59d1b5sa_



not modelled 50.0 16
Fold:CoA-dependent acyltransferases
Superfamily:CoA-dependent acyltransferases
Family:CAT-like
60c4n72B_



not modelled 46.2 13
PDB header:transferase
Chain: B: PDB Molecule:pyruvate dehydrogenase (dihydrolipoyltransacetylase
PDBTitle: catalytic domain from dihydrolipoamide acetyltransferase of pyruvate2 dehydrogenase from escherichia coli
61c3l60A_



not modelled 31.2 17
PDB header:oxidoreductase
Chain: A: PDB Molecule:branched-chain alpha-keto acid dehydrogenase;
PDBTitle: crystal structure of branched-chain alpha-keto acid dehydrogenase2 subunit e2 from mycobacterium tuberculosis
62c2dr1A_



not modelled 19.3 22
PDB header:transferase
Chain: A: PDB Molecule:386aa long hypothetical serine aminotransferase;
PDBTitle: crystal structure of the ph1308 protein from pyrococcus horikoshii ot3
63c5wmmA_



not modelled 18.2 5
PDB header:biosynthetic protein
Chain: A: PDB Molecule:nrps;
PDBTitle: crystal structure of an adenylation domain interrupted by a2 methylation domain (ama4) from nonribosomal peptide synthetase tios
64c2ii4C_



not modelled 17.5 14
PDB header:transferase
Chain: C: PDB Molecule:lipoamide acyltransferase component of branched-chain
PDBTitle: crystal structure of a cubic core of the dihydrolipoamide2 acyltransferase (e2b) component in the branched-chain alpha-ketoacid3 dehydrogenase complex (bckdc), coenzyme a-bound form
65c6h60A_



not modelled 14.9 15
PDB header:oxidoreductase
Chain: A: PDB Molecule:pyruvate dehydrogenase protein x component, mitochondrial;
PDBTitle: pseudo-atomic structural model of the e3bp component of the human2 pyruvate dehydrogenase multienzyme complex
66c2huuA_



not modelled 14.1 17
PDB header:transferase
Chain: A: PDB Molecule:alanine glyoxylate aminotransferase;
PDBTitle: crystal structure of aedes aegypti alanine glyoxylate aminotransferase2 in complex with alanine
67c3mafB_



not modelled 10.3 12
PDB header:lyase
Chain: B: PDB Molecule:sphingosine-1-phosphate lyase;
PDBTitle: crystal structure of stspl (asymmetric form)
68c6iyaD_



not modelled 6.7 3
PDB header:antitoxin
Chain: D: PDB Molecule:transcriptional regulator copg family;
PDBTitle: structure of the dna binding domain of antitoxin copaso
69c4eb5B_



not modelled 6.1 24
PDB header:transferase/metal binding protein
Chain: B: PDB Molecule:probable cysteine desulfurase 2;
PDBTitle: a. fulgidus iscs-iscu complex structure
70c6gtsC_



not modelled 5.5 6
PDB header:transcription
Chain: C: PDB Molecule:duf1778 domain-containing protein;
PDBTitle: structure of the atat-atar complex bound dna
71d1h0ca_



not modelled 5.5 24
Fold:PLP-dependent transferase-like
Superfamily:PLP-dependent transferases
Family:Cystathionine synthase-like
72c5zsqA_



not modelled 5.4 6
PDB header:biosynthetic protein
Chain: A: PDB Molecule:cysteine desulfurase;
PDBTitle: nifs from hydrogenimonas thermophila, soaked with l-cysteine for 4 min
73c2rbfB_



not modelled 5.3 17
PDB header:oxidoreductase/dna
Chain: B: PDB Molecule:bifunctional protein puta;
PDBTitle: structure of the ribbon-helix-helix domain of escherichia coli puta2 (puta52) complexed with operator dna (o2)

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below