Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3745c_(-)_4196064_4196276
DateFri Aug 9 18:20:44 BST 2019
Unique Job ID059bce003f7a93dc
SequenceMSDCNVLGGA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:44.413 Y:51.834 Z:37.904
Model (left) based on template c2lq3A_
Top template information
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: solution nmr structure of syc0711_d from synechococcus sp., northeast2 structural genomics consortium (nesg) target snr212
Confidence and coverage
Confidence:100.0% Coverage: 97%
68 residues ( 97% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2lq3A_



100.0 50
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: solution nmr structure of syc0711_d from synechococcus sp., northeast2 structural genomics consortium (nesg) target snr212
2c3ushB_



100.0 53
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of the q2s0r5 protein from salinibacter ruber,2 northeast structural genomics consortium target srr207
3c4iohA_



100.0 54
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:tll1086 protein;
PDBTitle: crystal structure of the tll1086 protein from thermosynechococcus2 elongatus, northeast structural genomics consortium target ter258
4c4qsgA_



13.4 10
PDB header:structural protein
Chain: A: PDB Molecule:gas vesicle protein;
PDBTitle: crystal structure of gas vesicle protein gvpf from microcystis2 aeruginosa
5d1u5tb1



13.1 14
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Vacuolar sorting protein domain
6c2l1qA_



12.4 20
PDB header:antimicrobial protein
Chain: A: PDB Molecule:liver-expressed antimicrobial peptide 2;
PDBTitle: solution structure of human liver expressed antimicrobial peptide 2
7c5kvmA_



9.8 32
PDB header:cell adhesion
Chain: A: PDB Molecule:adhesion g-protein coupled receptor g1;
PDBTitle: extracellular region of mouse gpr56/adgrg1 in complex with fn32 monobody
8c5znuA_



9.8 43
PDB header:toxin
Chain: A: PDB Molecule:omega-conotoxin-like bu8;
PDBTitle: structure of omega conotoxin bu8
9c5lskP_



9.2 27
PDB header:cell cycle
Chain: P: PDB Molecule:centromere protein c;
PDBTitle: crystal structure of the human kinetochore mis12-cenp-c complex
10c4a54B_



9.1 24
PDB header:rna binding protein/hydrolase
Chain: B: PDB Molecule:mrna decapping complex subunit 2;
PDBTitle: structural basis of the dcp1:dcp2 mrna decapping complex activation2 by edc3 and scd6
11c4e86L_



8.7 38
PDB header:antimicrobial protein
Chain: L: PDB Molecule:defensin-5;
PDBTitle: crystal structure of human alpha-defensin 5, hd5 (leu29aba mutant)
12c4e86H_



8.7 38
PDB header:antimicrobial protein
Chain: H: PDB Molecule:defensin-5;
PDBTitle: crystal structure of human alpha-defensin 5, hd5 (leu29aba mutant)
13c4e86D_



8.7 38
PDB header:antimicrobial protein
Chain: D: PDB Molecule:defensin-5;
PDBTitle: crystal structure of human alpha-defensin 5, hd5 (leu29aba mutant)
14c3i5wA_



8.5 38
PDB header:antimicrobial protein
Chain: A: PDB Molecule:defensin-5;
PDBTitle: crystal structure of human alpha-defensin 5 (mutant r13h)
15c3i5wB_



8.5 38
PDB header:antimicrobial protein
Chain: B: PDB Molecule:defensin-5;
PDBTitle: crystal structure of human alpha-defensin 5 (mutant r13h)
16c5cujC_



8.4 38
PDB header:antimicrobial protein
Chain: C: PDB Molecule:defensin-5;
PDBTitle: crystal structure of human defensin-5 y27a mutant crystal form 2.
17c5cumA_



8.4 38
PDB header:antimicrobial protein
Chain: A: PDB Molecule:defensin-5;
PDBTitle: crystal structure of human defensin-5 y27a mutant crystal form 1.
18c5cujF_



8.4 38
PDB header:antimicrobial protein
Chain: F: PDB Molecule:defensin-5;
PDBTitle: crystal structure of human defensin-5 y27a mutant crystal form 2.
19c5cujE_



8.4 38
PDB header:antimicrobial protein
Chain: E: PDB Molecule:defensin-5;
PDBTitle: crystal structure of human defensin-5 y27a mutant crystal form 2.
20c5cujD_



8.4 38
PDB header:antimicrobial protein
Chain: D: PDB Molecule:defensin-5;
PDBTitle: crystal structure of human defensin-5 y27a mutant crystal form 2.
21c5cumC_



not modelled 8.4 38
PDB header:antimicrobial protein
Chain: C: PDB Molecule:defensin-5;
PDBTitle: crystal structure of human defensin-5 y27a mutant crystal form 1.
22c5cujB_



not modelled 8.4 38
PDB header:antimicrobial protein
Chain: B: PDB Molecule:defensin-5;
PDBTitle: crystal structure of human defensin-5 y27a mutant crystal form 2.
23c5cumB_



not modelled 8.4 38
PDB header:antimicrobial protein
Chain: B: PDB Molecule:defensin-5;
PDBTitle: crystal structure of human defensin-5 y27a mutant crystal form 1.
24c5cujA_



not modelled 8.4 38
PDB header:antimicrobial protein
Chain: A: PDB Molecule:defensin-5;
PDBTitle: crystal structure of human defensin-5 y27a mutant crystal form 2.
25c4e86F_



not modelled 8.4 38
PDB header:antimicrobial protein
Chain: F: PDB Molecule:defensin-5;
PDBTitle: crystal structure of human alpha-defensin 5, hd5 (leu29aba mutant)
26c4e86G_



not modelled 8.4 38
PDB header:antimicrobial protein
Chain: G: PDB Molecule:defensin-5;
PDBTitle: crystal structure of human alpha-defensin 5, hd5 (leu29aba mutant)
27c4e83A_



not modelled 8.4 38
PDB header:antimicrobial protein
Chain: A: PDB Molecule:defensin-5;
PDBTitle: crystal structure of human alpha-defensin 5, hd5 (leu29nle mutant)
28c4e86A_



not modelled 8.4 38
PDB header:antimicrobial protein
Chain: A: PDB Molecule:defensin-5;
PDBTitle: crystal structure of human alpha-defensin 5, hd5 (leu29aba mutant)
29c4e86C_



not modelled 8.4 38
PDB header:antimicrobial protein
Chain: C: PDB Molecule:defensin-5;
PDBTitle: crystal structure of human alpha-defensin 5, hd5 (leu29aba mutant)
30c4e83B_



not modelled 8.4 38
PDB header:antimicrobial protein
Chain: B: PDB Molecule:defensin-5;
PDBTitle: crystal structure of human alpha-defensin 5, hd5 (leu29nle mutant)
31c4e86B_



not modelled 8.4 38
PDB header:antimicrobial protein
Chain: B: PDB Molecule:defensin-5;
PDBTitle: crystal structure of human alpha-defensin 5, hd5 (leu29aba mutant)
32c2mitA_



not modelled 8.4 38
PDB header:antimicrobial protein
Chain: A: PDB Molecule:defensin-5;
PDBTitle: solution structure of oxidized dimeric form of human defensin 5
33c2mitB_



not modelled 8.4 38
PDB header:antimicrobial protein
Chain: B: PDB Molecule:defensin-5;
PDBTitle: solution structure of oxidized dimeric form of human defensin 5
34c5cuiE_



not modelled 8.3 38
PDB header:antimicrobial protein
Chain: E: PDB Molecule:defensin-5;
PDBTitle: crystal structure of human defensin-5 r28a mutant.
35c5cuiD_



not modelled 8.3 38
PDB header:antimicrobial protein
Chain: D: PDB Molecule:defensin-5;
PDBTitle: crystal structure of human defensin-5 r28a mutant.
36c5cuiC_



not modelled 8.3 38
PDB header:antimicrobial protein
Chain: C: PDB Molecule:defensin-5;
PDBTitle: crystal structure of human defensin-5 r28a mutant.
37c5cuiA_



not modelled 8.3 38
PDB header:antimicrobial protein
Chain: A: PDB Molecule:defensin-5;
PDBTitle: crystal structure of human defensin-5 r28a mutant.
38c5cuiF_



not modelled 8.3 38
PDB header:antimicrobial protein
Chain: F: PDB Molecule:defensin-5;
PDBTitle: crystal structure of human defensin-5 r28a mutant.
39c5cuiB_



not modelled 8.3 38
PDB header:antimicrobial protein
Chain: B: PDB Molecule:defensin-5;
PDBTitle: crystal structure of human defensin-5 r28a mutant.
40c4e86E_



not modelled 8.2 38
PDB header:antimicrobial protein
Chain: E: PDB Molecule:defensin-5;
PDBTitle: crystal structure of human alpha-defensin 5, hd5 (leu29aba mutant)
41c1zmpB_



not modelled 8.2 38
PDB header:antimicrobial protein
Chain: B: PDB Molecule:defensin 5;
PDBTitle: crystal structure of human defensin-5
42c2lxzA_



not modelled 8.2 38
PDB header:antimicrobial protein
Chain: A: PDB Molecule:defensin-5;
PDBTitle: solution structure of the antimicrobial peptide human defensin 5
43c1zmpA_



not modelled 8.2 38
PDB header:antimicrobial protein
Chain: A: PDB Molecule:defensin 5;
PDBTitle: crystal structure of human defensin-5
44c1zmpC_



not modelled 8.2 38
PDB header:antimicrobial protein
Chain: C: PDB Molecule:defensin 5;
PDBTitle: crystal structure of human defensin-5
45c1fygA_



not modelled 8.0 28
PDB header:toxin
Chain: A: PDB Molecule:omega conotoxin so3;
PDBTitle: solution structure of omega conotoxin so3 determined by 1h-2 nmr
46c1apfA_



not modelled 7.8 67
PDB header:cardiac stimulant
Chain: A: PDB Molecule:anthopleurin-b;
PDBTitle: anthopleurin-b, nmr, 20 structures
47d1lrva_



not modelled 7.2 10
Fold:alpha-alpha superhelix
Superfamily:ARM repeat
Family:Leucine-rich repeat variant
48c6g7gA_



not modelled 7.0 21
PDB header:plant protein
Chain: A: PDB Molecule:s-protein homolog 15;
PDBTitle: structure of sph (self-incompatibility protein homologue) proteins, a2 widespread family of small, highly stable, secreted proteins from3 plants
49c1z6fA_



not modelled 6.6 16
PDB header:hydrolase
Chain: A: PDB Molecule:penicillin-binding protein 5;
PDBTitle: crystal structure of penicillin-binding protein 5 from e. coli in2 complex with a boronic acid inhibitor
50c5fsrB_



not modelled 6.5 24
PDB header:hydrolase
Chain: B: PDB Molecule:d-alanyl-d-alanine carboxypeptidase dacd;
PDBTitle: crystal structure of penicillin binding protein 6b from2 escherichia coli
51c4gvbB_



not modelled 6.0 38
PDB header:toxin
Chain: B: PDB Molecule:kp6 killer toxin subunit beta;
PDBTitle: crystal structure of the virally encoded antifungal protein, kp6,2 heterodimer
52c2dj9A_



not modelled 6.0 73
PDB header:cytokine
Chain: A: PDB Molecule:growth-blocking peptide;
PDBTitle: solution structure of growth-blocking peptide of the2 cabbage armyworm, mamestra brassicae
53c2djcA_



not modelled 5.8 55
PDB header:cytokine
Chain: A: PDB Molecule:growth-blocking peptide;
PDBTitle: solution structure of growth-blocking peptide of the2 tobacco cutworm, spodoptera litura
54c4j37A_



not modelled 5.7 20
PDB header:rna binding protein
Chain: A: PDB Molecule:trna pseudouridine synthase a, mitochondrial;
PDBTitle: crystal structure of the catalytic domain of human pus1
55c2v1nA_



not modelled 5.4 23
PDB header:nuclear protein
Chain: A: PDB Molecule:protein kin homolog;
PDBTitle: solution structure of the region 51-160 of human kin172 reveals a winged helix fold
56c2n5qA_



not modelled 5.3 71
PDB header:unknown function
Chain: A: PDB Molecule:cysteine-rich peptide js1;
PDBTitle: solution structure of cystein-rich peptide js1 from jasminum sambac
57c2djyB_



not modelled 5.2 38
PDB header:ligase/signaling protein
Chain: B: PDB Molecule:mothers against decapentaplegic homolog 7;
PDBTitle: solution structure of smurf2 ww3 domain-smad7 py peptide2 complex
58c2kxqB_



not modelled 5.2 38
PDB header:protein binding
Chain: B: PDB Molecule:smad7 py motif containing peptide;
PDBTitle: solution structure of smurf2 ww2 and ww3 bound to smad7 py motif2 containing peptide

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