Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3753c_(-)_4199899_4200399
DateFri Aug 9 18:20:45 BST 2019
Unique Job IDabde109f49c6705f
SequenceMQRPAADTPD ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:19.771 Y:26.651 Z:27.209
Model (left) based on template c6b9rD_
Top template information
PDB header:oxidoreductase
Chain: D: PDB Molecule:hydroxyethylphosphonate dioxygenase;
PDBTitle: streptomyces albus hepd with substrate 2-hydroxyethylphosphonate (2-2 hep) and fe(ii) bound
Confidence and coverage
Confidence: 20.0% Coverage: 22%
36 residues ( 22% of your sequence) have been modelled with 20.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c6b9rD_



20.0 19
PDB header:oxidoreductase
Chain: D: PDB Molecule:hydroxyethylphosphonate dioxygenase;
PDBTitle: streptomyces albus hepd with substrate 2-hydroxyethylphosphonate (2-2 hep) and fe(ii) bound
2c5lc5E_



17.5 12
PDB header:oxidoreductase
Chain: E: PDB Molecule:nadh dehydrogenase [ubiquinone] flavoprotein 2,
PDBTitle: structure of mammalian respiratory complex i, class2
3d1q1aa_



17.0 17
Fold:DHS-like NAD/FAD-binding domain
Superfamily:DHS-like NAD/FAD-binding domain
Family:Sir2 family of transcriptional regulators
4c6gcsH_



15.9 8
PDB header:oxidoreductase
Chain: H: PDB Molecule:24-kda subunit (nuhm);
PDBTitle: cryo-em structure of respiratory complex i from yarrowia lipolytica
5c5lnk2_



14.8 12
PDB header:oxidoreductase
Chain: 2: PDB Molecule:mitochondrial complex i, 24 kda subunit;
PDBTitle: entire ovine respiratory complex i
6d2fug21



12.9 27
Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:NQO2-like
7c2l9fA_



11.7 29
PDB header:transferase
Chain: A: PDB Molecule:cale8;
PDBTitle: nmr solution structure of meacp
8c6f3tK_



11.5 22
PDB header:transcription
Chain: K: PDB Molecule:transcription initiation factor tfiid subunit 6;
PDBTitle: crystal structure of the human taf5-taf6-taf9 complex
9c3cm1C_



11.3 12
PDB header:cell cycle
Chain: C: PDB Molecule:ssga-like sporulation-specific cell division protein;
PDBTitle: crystal structure of ssga-like sporulation-specific cell division2 protein (yp_290167.1) from thermobifida fusca yx-er1 at 2.60 a3 resolution
10c2mmpA_



11.3 25
PDB header:ribosomal protein
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: solution structure of a ribosomal protein
11d1bl0a2



11.1 31
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:AraC type transcriptional activator
12c6hl2C_



10.4 19
PDB header:electron transport
Chain: C: PDB Molecule:nadh-quinone oxidoreductase subunit e;
PDBTitle: wild-type nuoef from aquifex aeolicus - oxidized form
13c5up5A_



10.0 54
PDB header:de novo protein
Chain: A: PDB Molecule:ehee_rd1_0284;
PDBTitle: solution structure of the de novo mini protein ehee_rd1_0284
14c3d0fA_



9.6 15
PDB header:transferase
Chain: A: PDB Molecule:penicillin-binding 1 transmembrane protein mrca;
PDBTitle: structure of the big_1156.2 domain of putative penicillin-binding2 protein mrca from nitrosomonas europaea atcc 19718
15d1d5ya2



8.9 31
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:AraC type transcriptional activator
16c4h2uC_



7.7 22
PDB header:ligase
Chain: C: PDB Molecule:aminoacyl carrier protein 1;
PDBTitle: crystal structure of bradyrhizobium japonicum glycine:[carrier2 protein] ligase complexed with cognate carrier protein and atp
17c4yf1D_



7.6 16
PDB header:hydrolase
Chain: D: PDB Molecule:lmo0812 protein;
PDBTitle: 1.85 angstrom crystal structure of lmo0812 from listeria monocytogenes2 egd-e
18c5vwxB_



7.5 32
PDB header:apoptosis
Chain: B: PDB Molecule:bcl-2-like protein 11;
PDBTitle: bak core latch dimer in complex with bim-h0-h3glt
19d1tafb_



6.8 19
Fold:Histone-fold
Superfamily:Histone-fold
Family:TBP-associated factors, TAFs
20c4dkkA_



6.6 43
PDB header:rna binding protein
Chain: A: PDB Molecule:double-stranded rna-binding protein staufen homolog 1;
PDBTitle: the x-ray crystal structure of the human stau1 ssm-'rbd'5 domain-2 swapped dimer
21c5fyqB_



not modelled 6.6 22
PDB header:hydrolase
Chain: B: PDB Molecule:nad-dependent protein deacetylase sirtuin-2;
PDBTitle: sirt2 in complex with a 13-mer trifluoroacetylated ran peptide
22d1g3wa2



not modelled 6.2 25
Fold:Iron-dependent repressor protein, dimerization domain
Superfamily:Iron-dependent repressor protein, dimerization domain
Family:Iron-dependent repressor protein, dimerization domain
23c3tkaA_



not modelled 6.1 33
PDB header:transferase
Chain: A: PDB Molecule:ribosomal rna small subunit methyltransferase h;
PDBTitle: crystal structure and solution saxs of methyltransferase rsmh from2 e.coli
24d2isya2



not modelled 5.9 22
Fold:Iron-dependent repressor protein, dimerization domain
Superfamily:Iron-dependent repressor protein, dimerization domain
Family:Iron-dependent repressor protein, dimerization domain
25d3cu3a1



not modelled 5.7 11
Fold:Cystatin-like
Superfamily:NTF2-like
Family:BaiE/LinA-like
26c5vwxD_



not modelled 5.3 35
PDB header:apoptosis
Chain: D: PDB Molecule:bcl-2-like protein 11;
PDBTitle: bak core latch dimer in complex with bim-h0-h3glt
27d1tmoa2



not modelled 5.3 25
Fold:Formate dehydrogenase/DMSO reductase, domains 1-3
Superfamily:Formate dehydrogenase/DMSO reductase, domains 1-3
Family:Formate dehydrogenase/DMSO reductase, domains 1-3
28c5chhA_



not modelled 5.3 23
PDB header:transcription
Chain: A: PDB Molecule:arac family transcriptional regulator;
PDBTitle: crystal structure of transcriptional regulator cdpr from pseudomonas2 aeruginosa

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