Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3757c_(proW)_4202788_4203477
DateFri Aug 9 18:20:46 BST 2019
Unique Job ID1ae3466db0831c6f
SequenceMHYLMTHPGA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:43.406 Y:49.866 Z:73.887
Model (left) based on template c4ymuC_
Top template information
PDB header:protein binding/transport protein
Chain: C: PDB Molecule:abc-type amino acid transport system, permease component;
PDBTitle: crystal structure of an amino acid abc transporter complex with2 arginines and atps
Confidence and coverage
Confidence: 99.9% Coverage: 89%
203 residues ( 89% of your sequence) have been modelled with 99.9% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c4ymuC_



99.9 17
PDB header:protein binding/transport protein
Chain: C: PDB Molecule:abc-type amino acid transport system, permease component;
PDBTitle: crystal structure of an amino acid abc transporter complex with2 arginines and atps
2d2onkc1



99.9 19
Fold:MetI-like
Superfamily:MetI-like
Family:MetI-like
3c2onkC_



99.9 19
PDB header:membrane protein
Chain: C: PDB Molecule:molybdate/tungstate abc transporter, permease
PDBTitle: abc transporter modbc in complex with its binding protein2 moda
4d3d31c1



99.9 18
Fold:MetI-like
Superfamily:MetI-like
Family:MetI-like
5c3d31D_



99.9 18
PDB header:transport protein
Chain: D: PDB Molecule:sulfate/molybdate abc transporter, permease protein;
PDBTitle: modbc from methanosarcina acetivorans
6c4tqvI_



99.9 16
PDB header:transport protein
Chain: I: PDB Molecule:algm1;
PDBTitle: crystal structure of a bacterial abc transporter involved in the2 import of the acidic polysaccharide alginate
7d3dhwa1



99.9 23
Fold:MetI-like
Superfamily:MetI-like
Family:MetI-like
8c2r6gF_



99.9 18
PDB header:hydrolase/transport protein
Chain: F: PDB Molecule:maltose transport system permease protein malf;
PDBTitle: the crystal structure of the e. coli maltose transporter
9d2r6gf2



99.9 18
Fold:MetI-like
Superfamily:MetI-like
Family:MetI-like
10c4tqvJ_



99.9 15
PDB header:transport protein
Chain: J: PDB Molecule:algm2;
PDBTitle: crystal structure of a bacterial abc transporter involved in the2 import of the acidic polysaccharide alginate
11c3fh6F_



99.9 17
PDB header:transport protein
Chain: F: PDB Molecule:maltose transport system permease protein malf;
PDBTitle: crystal structure of the resting state maltose transporter from e.2 coli
12d2r6gg1



99.8 17
Fold:MetI-like
Superfamily:MetI-like
Family:MetI-like
13c5kbuA_



93.3 14
PDB header:transport protein
Chain: A: PDB Molecule:glutamate receptor 2,voltage-dependent calcium channel
PDBTitle: cryo-em structure of glua2-2xstz complex at 7.8 angstrom resolution
14c2m8gX_



32.8 23
PDB header:transcription
Chain: X: PDB Molecule:transcriptional regulator;
PDBTitle: structure, function, and tethering of dna-binding domains in 542 transcriptional activators
15d1umqa_



28.8 10
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:FIS-like
16c1umqA_



28.8 10
PDB header:dna-binding protein
Chain: A: PDB Molecule:photosynthetic apparatus regulatory protein;
PDBTitle: solution structure and dna binding of the effector domain2 from the global regulator prra(rega) from r. sphaeroides:3 insights into dna binding specificity
17d1ntca_



28.4 19
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:FIS-like
18c4l5eA_



27.1 13
PDB header:protein binding
Chain: A: PDB Molecule:transcriptional regulator (ntrc family);
PDBTitle: crystal structure of a. aeolicus ntrc1 dna binding domain
19d1fipa_



18.0 16
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:FIS-like
20d1etob_



15.4 16
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:FIS-like
21d1etxa_



not modelled 13.4 16
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:FIS-like
22c3e7lD_



not modelled 13.0 19
PDB header:transcription regulator
Chain: D: PDB Molecule:transcriptional regulator (ntrc family);
PDBTitle: crystal structure of sigma54 activator ntrc4's dna binding2 domain
23c1g2hA_



not modelled 11.1 20
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulatory protein tyrr homolog;
PDBTitle: solution structure of the dna-binding domain of the tyrr2 protein of haemophilus influenzae
24d1g2ha_



not modelled 11.1 20
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:FIS-like
25c2ks1A_



not modelled 9.3 17
PDB header:transferase
Chain: A: PDB Molecule:receptor tyrosine-protein kinase erbb-2;
PDBTitle: heterodimeric association of transmembrane domains of erbb1 and erbb22 receptors enabling kinase activation
26c2jwaA_



not modelled 9.3 17
PDB header:transferase
Chain: A: PDB Molecule:receptor tyrosine-protein kinase erbb-2;
PDBTitle: erbb2 transmembrane segment dimer spatial structure
27c2cw1A_



not modelled 9.2 26
PDB header:de novo protein
Chain: A: PDB Molecule:sn4m;
PDBTitle: solution structure of the de novo-designed lambda cro fold2 protein
28c2lhuA_



not modelled 8.6 29
PDB header:structural protein
Chain: A: PDB Molecule:mybpc3 protein;
PDBTitle: structural insight into the unique cardiac myosin binding protein-c2 motif: a partially folded domain
29c2momC_



not modelled 8.3 17
PDB header:membrane protein
Chain: C: PDB Molecule:lysosome-associated membrane glycoprotein 2;
PDBTitle: structural insights of tm domain of lamp-2a in dpc micelles
30c2momB_



not modelled 8.3 17
PDB header:membrane protein
Chain: B: PDB Molecule:lysosome-associated membrane glycoprotein 2;
PDBTitle: structural insights of tm domain of lamp-2a in dpc micelles
31c5xu1M_



not modelled 7.7 11
PDB header:transport protein
Chain: M: PDB Molecule:abc transporter permeae;
PDBTitle: structure of a non-canonical abc transporter from streptococcus2 pneumoniae r6
32c5m7nA_



not modelled 7.7 16
PDB header:signaling protein
Chain: A: PDB Molecule:nitrogen assimilation regulatory protein;
PDBTitle: crystal structure of ntrx from brucella abortus in complex with atp2 processed with the crystaldirect automated mounting and cryo-cooling3 technology
33c6f2dJ_



not modelled 5.9 22
PDB header:protein transport
Chain: J: PDB Molecule:flagellar biosynthetic protein fliq;
PDBTitle: a flipqr complex forms the core of the salmonella type iii secretion2 system export apparatus.
34c6f2dI_



not modelled 5.9 22
PDB header:protein transport
Chain: I: PDB Molecule:flagellar biosynthetic protein fliq;
PDBTitle: a flipqr complex forms the core of the salmonella type iii secretion2 system export apparatus.
35c5lj7B_



not modelled 5.8 13
PDB header:transport protein
Chain: B: PDB Molecule:macrolide export atp-binding/permease protein macb;
PDBTitle: structure of aggregatibacter actinomycetemcomitans macb bound to atp2 (p21)
36c1ojlD_



not modelled 5.7 26
PDB header:response regulator
Chain: D: PDB Molecule:transcriptional regulatory protein zrar;
PDBTitle: crystal structure of a sigma54-activator suggests the mechanism for2 the conformational switch necessary for sigma54 binding
37c4m48A_



not modelled 5.4 12
PDB header:transport protein
Chain: A: PDB Molecule:transporter;
PDBTitle: x-ray structure of dopamine transporter elucidates antidepressant2 mechanism

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Transmembrane helix prediction 

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