Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3805c_(-)_4267131_4269014
DateFri Aug 9 18:20:51 BST 2019
Unique Job ID11153af62f9e66af
SequenceMVRVSLWLSV ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:55.728 Y:48.749 Z:60.112
Model (left) based on template c5f15A_
Top template information
PDB header:transferase
Chain: A: PDB Molecule:4-amino-4-deoxy-l-arabinose (l-ara4n) transferase;
PDBTitle: crystal structure of arnt from cupriavidus metallidurans bound to2 undecaprenyl phosphate
Confidence and coverage
Confidence: 99.1% Coverage: 61%
381 residues ( 61% of your sequence) have been modelled with 99.1% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
439 residues ( 70%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5f15A_



99.1 11
PDB header:transferase
Chain: A: PDB Molecule:4-amino-4-deoxy-l-arabinose (l-ara4n) transferase;
PDBTitle: crystal structure of arnt from cupriavidus metallidurans bound to2 undecaprenyl phosphate
2c3wajA_



98.2 14
PDB header:transferase
Chain: A: PDB Molecule:transmembrane oligosaccharyl transferase;
PDBTitle: crystal structure of the archaeoglobus fulgidus2 oligosaccharyltransferase (o29867_arcfu) complex with zn and sulfate
3c3rceA_



98.0 16
PDB header:transferase/peptide
Chain: A: PDB Molecule:oligosaccharide transferase to n-glycosylate proteins;
PDBTitle: bacterial oligosaccharyltransferase pglb
4c6p2rB_



97.4 12
PDB header:transferase
Chain: B: PDB Molecule:dolichyl-phosphate-mannose--protein mannosyltransferase 2;
PDBTitle: structure of s. cerevisiae protein o-mannosyltransferase pmt1-pmt22 complex bound to the sugar donor
5c6p25A_



97.1 12
PDB header:transferase
Chain: A: PDB Molecule:dolichyl-phosphate-mannose--protein mannosyltransferase 1;
PDBTitle: structure of s. cerevisiae protein o-mannosyltransferase pmt1-pmt22 complex bound to the sugar donor and a peptide acceptor
6c6eznF_



96.4 13
PDB header:membrane protein
Chain: F: PDB Molecule:dolichyl-diphosphooligosaccharide--protein
PDBTitle: cryo-em structure of the yeast oligosaccharyltransferase (ost) complex
7d2d6fc2



62.9 21
Fold:DCoH-like
Superfamily:GAD domain-like
Family:GAD domain
8d1zq1c2



58.9 26
Fold:DCoH-like
Superfamily:GAD domain-like
Family:GAD domain
9c4j7bF_



36.1 26
PDB header:transferase
Chain: F: PDB Molecule:205 kda microtubule-associated protein;
PDBTitle: crystal structure of polo-like kinase 1
10c4j7bC_



36.1 26
PDB header:transferase
Chain: C: PDB Molecule:205 kda microtubule-associated protein;
PDBTitle: crystal structure of polo-like kinase 1
11c5uz9D_



35.3 30
PDB header:immune system/rna
Chain: D: PDB Molecule:crispr-associated protein csy3;
PDBTitle: cryo em structure of anti-crisprs, acrf1 and acrf2, bound to type i-f2 crrna-guided crispr surveillance complex
12c4eogA_



31.6 24
PDB header:dna binding protein
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of csx1 of pyrococcus furiosus
13d1usua_



19.8 12
Fold:Ribosomal protein S5 domain 2-like
Superfamily:Ribosomal protein S5 domain 2-like
Family:Hsp90 middle domain
14d1s4na_



19.0 19
Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:Glycolipid 2-alpha-mannosyltransferase
15c1s4pA_



17.9 19
PDB header:transferase
Chain: A: PDB Molecule:glycolipid 2-alpha-mannosyltransferase;
PDBTitle: crystal structure of yeast alpha1,2-mannosyltransferase kre2p/mnt1p:2 ternary complex with gdp/mn and methyl-alpha-mannoside acceptor
16d1g8fa2



17.9 22
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Nucleotidylyl transferase
Family:ATP sulfurylase catalytic domain
17d2prra1



17.6 7
Fold:AhpD-like
Superfamily:AhpD-like
Family:Atu0492-like
18c2gx8B_



17.2 22
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:nif3-related protein;
PDBTitle: the crystal structure of bacillus cereus protein related to nif3
19c5ve9C_



16.9 50
PDB header:protein binding
Chain: C: PDB Molecule:microtubule-actin cross-linking factor 1, isoforms 1/2/3/5;
PDBTitle: structure of hacf7 ef1-ef2-gar domains
20d1ht6a1



16.8 17
Fold:Glycosyl hydrolase domain
Superfamily:Glycosyl hydrolase domain
Family:alpha-Amylases, C-terminal beta-sheet domain
21d2gx8a1



not modelled 15.7 22
Fold:NIF3 (NGG1p interacting factor 3)-like
Superfamily:NIF3 (NGG1p interacting factor 3)-like
Family:NIF3 (NGG1p interacting factor 3)-like
22d1v5ra1



not modelled 15.3 38
Fold:N domain of copper amine oxidase-like
Superfamily:GAS2 domain-like
Family:GAS2 domain
23c3arcl_



not modelled 15.1 33
PDB header:electron transport, photosynthesis
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: crystal structure of oxygen-evolving photosystem ii at 1.9 angstrom2 resolution
24c4ub6L_



not modelled 14.6 33
PDB header:electron transport, photosynthesis
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: native structure of photosystem ii (dataset-1) by a femtosecond x-ray2 laser
25c4tnhl_



not modelled 14.6 33
PDB header:electron transport,photosynthesis
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: rt xfel structure of photosystem ii in the dark state at 4.9 a2 resolution
26c3a0bl_



not modelled 14.6 33
PDB header:electron transport
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: crystal structure of br-substituted photosystem ii complex
27c4il6L_



not modelled 14.6 33
PDB header:electron transport
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: structure of sr-substituted photosystem ii
28c5e7cl_



not modelled 14.6 33
PDB header:photosynthesis
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: macromolecular diffractive imaging using imperfect crystals - bragg2 data
29c4tnkL_



not modelled 14.6 33
PDB header:electron transport,photosynthesis
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: rt xfel structure of photosystem ii 250 microsec after the third2 illumination at 5.2 a resolution
30c4rvyl_



not modelled 14.6 33
PDB header:oxidoreductase
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: serial time resolved crystallography of photosystem ii using a2 femtosecond x-ray laser. the s state after two flashes (s3)
31c4ixrl_



not modelled 14.6 33
PDB header:photosynthesis
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: rt fs x-ray diffraction of photosystem ii, first illuminated state
32c4fbyL_



not modelled 14.6 33
PDB header:photosynthesis
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: fs x-ray diffraction of photosystem ii
33c4tnil_



not modelled 14.6 33
PDB header:electron transport,photosynthesis
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: rt xfel structure of photosystem ii 500 ms after the third2 illumination at 4.6 a resolution
34c4ixql_



not modelled 14.6 33
PDB header:photosynthesis
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: rt fs x-ray diffraction of photosystem ii, dark state
35c3wu2L_



not modelled 14.6 33
PDB header:electron transport, photosynthesis
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: crystal structure analysis of photosystem ii complex
36c4ub8l_



not modelled 14.6 33
PDB header:electron transport, photosynthesis
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: native structure of photosystem ii (dataset-2) by a femtosecond x-ray2 laser
37c4tnjL_



not modelled 14.6 33
PDB header:electron transport,photosynthesis
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: rt xfel structure of photosystem ii 500 ms after the 2nd illumination2 (2f) at 4.5 a resolution
38c3arcL_



not modelled 14.6 33
PDB header:electron transport, photosynthesis
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: crystal structure of oxygen-evolving photosystem ii at 1.9 angstrom2 resolution
39c4ub6l_



not modelled 14.6 33
PDB header:electron transport, photosynthesis
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: native structure of photosystem ii (dataset-1) by a femtosecond x-ray2 laser
40c4tniL_



not modelled 14.6 33
PDB header:electron transport,photosynthesis
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: rt xfel structure of photosystem ii 500 ms after the third2 illumination at 4.6 a resolution
41c4ixrL_



not modelled 14.6 33
PDB header:photosynthesis
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: rt fs x-ray diffraction of photosystem ii, first illuminated state
42c4il6l_



not modelled 14.6 33
PDB header:electron transport
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: structure of sr-substituted photosystem ii
43c3kziL_



not modelled 14.6 33
PDB header:electron transport
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: crystal structure of monomeric form of cyanobacterial photosystem ii
44c4ixqL_



not modelled 14.6 33
PDB header:photosynthesis
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: rt fs x-ray diffraction of photosystem ii, dark state
45c3prrL_



not modelled 14.6 33
PDB header:photosynthesis
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: crystal structure of cyanobacterial photosystem ii in complex with2 terbutryn (part 2 of 2). this file contains second monomer of psii3 dimer
46c4tnkl_



not modelled 14.6 33
PDB header:electron transport,photosynthesis
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: rt xfel structure of photosystem ii 250 microsec after the third2 illumination at 5.2 a resolution
47c5e7cL_



not modelled 14.6 33
PDB header:photosynthesis
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: macromolecular diffractive imaging using imperfect crystals - bragg2 data
48c4ub8L_



not modelled 14.6 33
PDB header:electron transport, photosynthesis
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: native structure of photosystem ii (dataset-2) by a femtosecond x-ray2 laser
49c3a0hl_



not modelled 14.6 33
PDB header:electron transport
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: crystal structure of i-substituted photosystem ii complex
50c2axtL_



not modelled 14.6 33
PDB header:electron transport
Chain: L: PDB Molecule:photosystem ii reaction center l protein;
PDBTitle: crystal structure of photosystem ii from thermosynechococcus elongatus
51c1s5ll_



not modelled 14.6 33
PDB header:photosynthesis
Chain: L: PDB Molecule:photosystem ii reaction center l protein;
PDBTitle: architecture of the photosynthetic oxygen evolving center
52c2axtl_



not modelled 14.6 33
PDB header:electron transport
Chain: L: PDB Molecule:photosystem ii reaction center l protein;
PDBTitle: crystal structure of photosystem ii from thermosynechococcus elongatus
53c4fbyd_



not modelled 14.6 33
PDB header:photosynthesis
Chain: D: PDB Molecule:photosystem ii d2 protein;
PDBTitle: fs x-ray diffraction of photosystem ii
54c3wu2l_



not modelled 14.6 33
PDB header:electron transport, photosynthesis
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: crystal structure analysis of photosystem ii complex
55c3bz1L_



not modelled 14.6 33
PDB header:electron transport
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: crystal structure of cyanobacterial photosystem ii (part 1 of 2). this2 file contains first monomer of psii dimer
56d2axtl1



not modelled 14.6 33
Fold:Single transmembrane helix
Superfamily:Photosystem II reaction center protein L, PsbL
Family:PsbL-like
57c1s5lL_



not modelled 14.6 33
PDB header:photosynthesis
Chain: L: PDB Molecule:photosystem ii reaction center l protein;
PDBTitle: architecture of the photosynthetic oxygen evolving center
58c3prqL_



not modelled 14.6 33
PDB header:photosynthesis
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: crystal structure of cyanobacterial photosystem ii in complex with2 terbutryn (part 1 of 2). this file contains first monomer of psii3 dimer
59c3bz2L_



not modelled 14.6 33
PDB header:electron transport
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: crystal structure of cyanobacterial photosystem ii (part 2 of 2). this2 file contains second monomer of psii dimer
60c4rvyL_



not modelled 14.6 33
PDB header:oxidoreductase
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: serial time resolved crystallography of photosystem ii using a2 femtosecond x-ray laser. the s state after two flashes (s3)
61c3a0hL_



not modelled 14.6 33
PDB header:electron transport
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: crystal structure of i-substituted photosystem ii complex
62c4tnjl_



not modelled 14.6 33
PDB header:electron transport,photosynthesis
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: rt xfel structure of photosystem ii 500 ms after the 2nd illumination2 (2f) at 4.5 a resolution
63c4tnhL_



not modelled 14.6 33
PDB header:electron transport,photosynthesis
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: rt xfel structure of photosystem ii in the dark state at 4.9 a2 resolution
64c3a0bL_



not modelled 14.6 33
PDB header:electron transport
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: crystal structure of br-substituted photosystem ii complex
65c4pj0l_



not modelled 14.6 33
PDB header:oxidoreductase, electron transport
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: structure of t.elongatus photosystem ii, rows of dimers crystal2 packing
66c4pj0L_



not modelled 14.6 33
PDB header:oxidoreductase, electron transport
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: structure of t.elongatus photosystem ii, rows of dimers crystal2 packing
67c6nd1A_



not modelled 14.3 22
PDB header:protein transport
Chain: A: PDB Molecule:protein translocation protein sec63;
PDBTitle: cryoem structure of the sec complex from yeast
68d1su3a1



not modelled 14.1 50
Fold:PGBD-like
Superfamily:PGBD-like
Family:MMP N-terminal domain
69c3cr8C_



not modelled 14.0 18
PDB header:transferase
Chain: C: PDB Molecule:sulfate adenylyltransferase, adenylylsulfate kinase;
PDBTitle: hexameric aps kinase from thiobacillus denitrificans
70d1pama3



not modelled 13.9 47
Fold:Glycosyl hydrolase domain
Superfamily:Glycosyl hydrolase domain
Family:alpha-Amylases, C-terminal beta-sheet domain
71d1slma1



not modelled 13.9 50
Fold:PGBD-like
Superfamily:PGBD-like
Family:MMP N-terminal domain
72c6hkeB_



not modelled 13.7 18
PDB header:transport protein
Chain: B: PDB Molecule:possible tctc subunit of the tripartite tricarboxylate
PDBTitle: matc (rpa3494) from rhodopseudomonas palustris with bound malate
73d1t5la1



not modelled 13.6 25
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Tandem AAA-ATPase domain
74c3jcul_



not modelled 13.6 46
PDB header:membrane protein
Chain: L: PDB Molecule:protein photosystem ii reaction center protein l;
PDBTitle: cryo-em structure of spinach psii-lhcii supercomplex at 3.2 angstrom2 resolution
75d1m55a_



not modelled 13.4 15
Fold:Origin of replication-binding domain, RBD-like
Superfamily:Origin of replication-binding domain, RBD-like
Family:Replication protein Rep, nuclease domain
76d1m8pa2



not modelled 13.3 27
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Nucleotidylyl transferase
Family:ATP sulfurylase catalytic domain
77c2nydB_



not modelled 13.2 15
PDB header:unknown function
Chain: B: PDB Molecule:upf0135 protein sa1388;
PDBTitle: crystal structure of staphylococcus aureus hypothetical protein sa1388
78c3n3fB_



not modelled 13.1 14
PDB header:protein binding
Chain: B: PDB Molecule:collagen alpha-1(xv) chain;
PDBTitle: crystal structure of the human collagen xv trimerization domain: a2 potent trimerizing unit common to multiplexin collagens
79d1x6va2



not modelled 13.1 17
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Nucleotidylyl transferase
Family:ATP sulfurylase catalytic domain
80c1r6xA_



not modelled 12.7 22
PDB header:transferase
Chain: A: PDB Molecule:atp:sulfate adenylyltransferase;
PDBTitle: the crystal structure of a truncated form of yeast atp2 sulfurylase, lacking the c-terminal aps kinase-like domain,3 in complex with sulfate
81d1ku1a_



not modelled 12.7 12
Fold:alpha-alpha superhelix
Superfamily:Sec7 domain
Family:Sec7 domain
82c3i71B_



not modelled 12.6 27
PDB header:unknown function
Chain: B: PDB Molecule:ethanolamine utilization protein eutk;
PDBTitle: ethanolamine utilization microcompartment shell subunit, eutk c-2 terminal domain
83c2ka6B_



not modelled 12.6 35
PDB header:transcription regulator
Chain: B: PDB Molecule:signal transducer and activator of transcription
PDBTitle: nmr structure of the cbp-taz2/stat1-tad complex
84c5a6eB_



not modelled 12.6 25
PDB header:transport
Chain: B: PDB Molecule:pore domain of potassium channel subfamily t member 1;
PDBTitle: cryo-em structure of the slo2.2 na-activated k channel
85c1oftC_



not modelled 12.4 14
PDB header:bacterial cell division inhibitor
Chain: C: PDB Molecule:hypothetical protein pa3008;
PDBTitle: crystal structure of sula from pseudomonas aeruginosa
86d1eaka1



not modelled 12.3 50
Fold:PGBD-like
Superfamily:PGBD-like
Family:MMP N-terminal domain
87d1l6ja1



not modelled 12.2 50
Fold:PGBD-like
Superfamily:PGBD-like
Family:MMP N-terminal domain
88c1m8pB_



not modelled 12.2 28
PDB header:transferase
Chain: B: PDB Molecule:sulfate adenylyltransferase;
PDBTitle: crystal structure of p. chrysogenum atp sulfurylase in the t-state
89d1s0pa_



not modelled 12.0 29
Fold:N-terminal domain of adenylylcyclase associated protein, CAP
Superfamily:N-terminal domain of adenylylcyclase associated protein, CAP
Family:N-terminal domain of adenylylcyclase associated protein, CAP
90c6f5dI_



not modelled 11.9 27
PDB header:hydrolase
Chain: I: PDB Molecule:atp synthase subunit epsilon, mitochondrial;
PDBTitle: trypanosoma brucei f1-atpase
91d1ofux_



not modelled 11.9 14
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Bacterial cell division inhibitor SulA
92c5ibwC_



not modelled 11.7 13
PDB header:motor protein
Chain: C: PDB Molecule:myosin ic heavy chain;
PDBTitle: complex of mlcc bound to the tandem iq motif of myoc
93d3bmva3



not modelled 11.6 47
Fold:Glycosyl hydrolase domain
Superfamily:Glycosyl hydrolase domain
Family:alpha-Amylases, C-terminal beta-sheet domain
94c2d6fD_



not modelled 11.5 22
PDB header:ligase/rna
Chain: D: PDB Molecule:glutamyl-trna(gln) amidotransferase subunit e;
PDBTitle: crystal structure of glu-trna(gln) amidotransferase in the2 complex with trna(gln)
95d1kona_



not modelled 11.5 60
Fold:YebC-like
Superfamily:YebC-like
Family:YebC-like
96c3kwpA_



not modelled 11.4 14
PDB header:transferase
Chain: A: PDB Molecule:predicted methyltransferase;
PDBTitle: crystal structure of putative methyltransferase from lactobacillus2 brevis
97c1bm4A_



not modelled 11.4 20
PDB header:viral protein
Chain: A: PDB Molecule:protein (moloney murine leukemia virus capsid);
PDBTitle: momlv capsid protein major homology region peptide analog
98c5a08A_



not modelled 11.4 21
PDB header:transferase
Chain: A: PDB Molecule:probable mannosyltransferase ktr4;
PDBTitle: x-ray structure of the mannosyltransferase ktr4p from s. cerevisiae
99d1ewna_



not modelled 11.4 16
Fold:FMT C-terminal domain-like
Superfamily:FMT C-terminal domain-like
Family:3-methyladenine DNA glycosylase (AAG, ANPG, MPG)

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below