Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3810_(pirG)_4273917_4274771
DateFri Aug 9 18:20:52 BST 2019
Unique Job IDd67c2e2cdb0b5d49
SequenceVPNRRRRKLS ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:11.347 Y:24.426 Z:13.612
Model (left) based on template c5h2wD_
Top template information
PDB header:protein transport/hydrolase
Chain: D: PDB Molecule:ubiquitin-like-specific protease 1;
PDBTitle: crystal structure of the karyopherin kap60p bound to the sumo protease2 ulp1p (150-340)
Confidence and coverage
Confidence: 1.8% Coverage: 2%
7 residues ( 2% of your sequence) have been modelled with 1.8% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
Please note: You must be registered and logged in to use Phyrealarm.
Warning: 84% of your sequence is predicted disordered. Disordered regions cannot be meaningfully predicted.
3D viewing
Interactive 3D view in JSmol
For other options to view your downloaded structure offline see the FAQ

Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
No hits with confidence > 5%

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite