Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3841_(bfrB)_4314356_4314901
DateSat Aug 10 22:05:02 BST 2019
Unique Job ID801fcc0355aabfeb
SequenceMTEYEGPKTK ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:45.562 Y:51.408 Z:40.570
Model (left) based on template c3qd8M_
Top template information
PDB header:metal binding protein
Chain: M: PDB Molecule:probable bacterioferritin bfrb;
PDBTitle: crystal structure of mycobacterium tuberculosis bfrb
Confidence and coverage
Confidence:100.0% Coverage: 90%
162 residues ( 90% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3qd8M_
100.0 100
PDB header:metal binding protein
Chain: M: PDB Molecule:probable bacterioferritin bfrb;
PDBTitle: crystal structure of mycobacterium tuberculosis bfrb
2c3vnxA_
100.0 29
PDB header:oxidoreductase
Chain: A: PDB Molecule:ferritin;
PDBTitle: crystal structure of ferritin from multicellular green algae, ulva2 pertusa.
3c3a9qR_
100.0 25
PDB header:oxidoreductase
Chain: R: PDB Molecule:
PDBTitle: crystal structure analysis of e173a variant of the soybean2 ferritin sfer4
4c4cmyN_
100.0 25
PDB header:metal transport
Chain: N: PDB Molecule:ferritin;
PDBTitle: chlorobium tepidum ferritin
5c2jd8C_
100.0 26
PDB header:metal transport
Chain: C: PDB Molecule:ferritin homolog;
PDBTitle: crystal structure of the zn-soaked ferritin from the2 hyperthermophilic archaeal anaerobe pyrococcus furiosus
6c3qz3A_
100.0 22
PDB header:oxidoreductase
Chain: A: PDB Molecule:ferritin;
PDBTitle: the crystal structure of ferritin from vibrio cholerae o1 biovar el2 tor str. n16961
7d1s3qa1
100.0 28
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
8c5ouwA_
100.0 21
PDB header:metal binding protein
Chain: A: PDB Molecule:ferritin;
PDBTitle: metal free structure of synftn
9c3bvkC_
100.0 19
PDB header:oxidoreductase
Chain: C: PDB Molecule:ferritin;
PDBTitle: structural basis for the iron uptake mechanism of helicobacter pylori2 ferritin
10d1euma_
100.0 21
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
11d2ceia1
100.0 24
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
12d1lb3a_
100.0 19
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
13d1rcda_
100.0 23
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
14d1r03a_
100.0 25
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
15d1vlga_
100.0 25
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
16d1krqa_
100.0 23
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
17d1z6om1
100.0 26
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
18d1mfra_
100.0 22
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
19d2za7a1
100.0 19
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
20d1z6oa1
100.0 18
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
21c5wpnA_
not modelled 100.0 25
PDB header:oxidoreductase
Chain: A: PDB Molecule:ferritin;
PDBTitle: zn-bound structure of chaetopterus variopedatus ferritin
22c6a4uD_
not modelled 100.0 25
PDB header:metal binding protein
Chain: D: PDB Molecule:ferritin;
PDBTitle: the first crystal structure of crustacean ferritin that is a hybrid2 type of h and l ferritin
23c3e6sD_
not modelled 100.0 22
PDB header:oxidoreductase
Chain: D: PDB Molecule:ferritin;
PDBTitle: crystal structure of ferritin soaked with iron from pseudo-nitzschia2 multiseries
24d1bg7a_
not modelled 100.0 25
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
25d1nf4a_
not modelled 100.0 15
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
26c3r2rA_
not modelled 100.0 16
PDB header:metal binding protein
Chain: A: PDB Molecule:bacterioferritin;
PDBTitle: 1.65a resolution structure of iron soaked ftna from pseudomonas2 aeruginosa (ph 6.0)
27d1jgca_
not modelled 100.0 21
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
28d2htna1
not modelled 100.0 19
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
29c4am4B_
not modelled 100.0 20
PDB header:metal binding protein
Chain: B: PDB Molecule:bacterioferritin;
PDBTitle: bacterioferritin from blastochloris viridis
30c5xx9A_
not modelled 100.0 19
PDB header:metal transport
Chain: A: PDB Molecule:bacterioferritin;
PDBTitle: crystal structure of bacterioferritin
31c3gvyC_
not modelled 100.0 16
PDB header:metal binding protein
Chain: C: PDB Molecule:bacterioferritin;
PDBTitle: crystal structure of bacterioferritin from r.sphaeroides
32c3bknB_
not modelled 100.0 21
PDB header:metal binding protein
Chain: B: PDB Molecule:bacterioferritin;
PDBTitle: the structure of mycobacterial bacterioferritin
33c3fvbB_
not modelled 100.0 18
PDB header:metal binding protein
Chain: B: PDB Molecule:bacterioferritin;
PDBTitle: crystal structure of ferritin (bacterioferritin) from brucella2 melitensis
34d2fkza1
not modelled 100.0 20
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
35c4di0B_
not modelled 99.9 22
PDB header:oxidoreductase
Chain: B: PDB Molecule:rubrerythrin;
PDBTitle: the structure of rubrerythrin from burkholderia pseudomallei
36d1j30a_
not modelled 99.9 18
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
37c2qqyA_
not modelled 99.9 14
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:sigma b operon;
PDBTitle: crystal structure of ferritin like, diiron-carboxylate proteins from2 bacillus anthracis str. ames
38d1yv1a1
not modelled 99.9 14
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
39d1lkoa1
not modelled 99.9 17
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
40c2clbP_
not modelled 99.9 17
PDB header:metal binding protein
Chain: P: PDB Molecule:dps-like protein;
PDBTitle: the structure of the dps-like protein from sulfolobus2 solfataricus reveals a bacterioferritin-like di-metal3 binding site within a dps-like dodecameric assembly
41c2vzbA_
not modelled 99.9 14
PDB header:metal transport
Chain: A: PDB Molecule:putative bacterioferritin-related protein;
PDBTitle: a dodecameric thioferritin in the bacterial domain, characterization2 of the bacterioferritin-related protein from bacteroides fragilis
42d1yuza1
not modelled 99.9 17
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
43d1nnqa1
not modelled 99.9 19
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
44d1o9ra_
not modelled 99.9 8
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
45c1dvbA_
not modelled 99.9 18
PDB header:electron transport
Chain: A: PDB Molecule:rubrerythrin;
PDBTitle: rubrerythrin
46c5hjhB_
not modelled 99.8 12
PDB header:metal binding protein
Chain: B: PDB Molecule:ferritin, dps family protein;
PDBTitle: dps4 from nostoc punctiforme in complex with fe ions
47d1jiga_
not modelled 99.8 13
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
48c4cybI_
not modelled 99.8 11
PDB header:iron binding protein
Chain: I: PDB Molecule:putative dna protection protein;
PDBTitle: dpsc from streptomyces coelicolor
49c2c41K_
not modelled 99.8 12
PDB header:iron-binding/oxidation protein
Chain: K: PDB Molecule:dps family dna-binding stress response protein;
PDBTitle: x-ray structure of dps from thermosynechococcus elongatus
50c2vxxB_
not modelled 99.8 13
PDB header:dna-binding protein
Chain: B: PDB Molecule:starvation induced dna binding protein;
PDBTitle: x-ray structure of dpsa from thermosynechococcus elongatus
51c3iq1A_
not modelled 99.8 12
PDB header:metal transport
Chain: A: PDB Molecule:dps family protein;
PDBTitle: crystal structure of dps protein from vibrio cholerae o1, a member of2 a broad superfamily of ferritin-like diiron-carboxylate proteins
52c2hr5B_
not modelled 99.8 19
PDB header:metal binding protein
Chain: B: PDB Molecule:rubrerythrin;
PDBTitle: pf1283- rubrerythrin from pyrococcus furiosus iron bound form
53d1ji5a_
not modelled 99.8 10
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
54c2d5kC_
not modelled 99.8 12
PDB header:metal binding protein
Chain: C: PDB Molecule:dps family protein;
PDBTitle: crystal structure of dps from staphylococcus aureus
55c1yuzB_
not modelled 99.8 16
PDB header:oxidoreductase
Chain: B: PDB Molecule:nigerythrin;
PDBTitle: partially reduced state of nigerythrin
56d1tjoa_
not modelled 99.8 13
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
57c2chpC_
not modelled 99.8 11
PDB header:dna binding protein
Chain: C: PDB Molecule:metalloregulation dna-binding stress protein;
PDBTitle: crystal structure of the dodecameric ferritin mrga from b. subtilis2 168
58c4cy9A_
not modelled 99.7 9
PDB header:iron-binding protein
Chain: A: PDB Molecule:dpsa;
PDBTitle: dpsa14 from streptomyces coelicolor
59d2oh3a1
not modelled 99.7 20
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:AMB4284-like
60d1n1qa_
not modelled 99.7 11
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
61c5lbhG_
not modelled 99.7 10
PDB header:transport protein
Chain: G: PDB Molecule:caip;
PDBTitle: crystal structure of helicobacter cinaedi caip
62c2c6rA_
not modelled 99.7 10
PDB header:dna-binding protein
Chain: A: PDB Molecule:dna-binding stress response protein, dps family;
PDBTitle: fe-soaked crystal structure of the dps92 from deinococcus2 radiodurans
63d1vela_
not modelled 99.7 10
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
64d1ji4a_
not modelled 99.7 10
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
65c3kwoA_
not modelled 99.7 10
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative bacterioferritin;
PDBTitle: crystal structure of putative bacterioferritin from2 campylobacter jejuni
66d2fjca1
not modelled 99.7 9
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
67d1umna_
not modelled 99.6 11
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
68d1dpsa_
not modelled 99.6 7
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
69c2wlaA_
not modelled 99.6 10
PDB header:oxidoreductase
Chain: A: PDB Molecule:dps-like peroxide resistance protein;
PDBTitle: streptococcus pyogenes dpr
70d2bk6a1
not modelled 99.6 12
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
71c3oghB_
not modelled 99.6 15
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:protein ycie;
PDBTitle: crystal structure of ycie protein from e. coli cft073, a member of2 ferritine-like superfamily of diiron-containing four-helix-bundle3 proteins
72c3qhbA_
not modelled 99.6 16
PDB header:metal transport
Chain: A: PDB Molecule:symerythrin;
PDBTitle: crystal structure of oxidized symerythrin from cyanophora paradoxa
73c2f7nA_
not modelled 99.6 7
PDB header:dna binding protein
Chain: A: PDB Molecule:dna-binding stress response protein, dps family;
PDBTitle: structure of d. radiodurans dps-1
74c2z90D_
not modelled 99.6 9
PDB header:dna binding protein
Chain: D: PDB Molecule:starvation-inducible dna-binding protein or fine
PDBTitle: crystal structure of the second dps from mycobacterium2 smegmatis
75c2xgwA_
not modelled 99.6 10
PDB header:metal binding protein
Chain: A: PDB Molecule:peroxide resistance protein;
PDBTitle: zinc-bound crystal structure of streptococcus pyogenes dpr
76c2yjkF_
not modelled 99.5 6
PDB header:metal-binding protein
Chain: F: PDB Molecule:afp;
PDBTitle: structure of dps from microbacterium arborescens in the2 high iron form
77d2yw6a1
not modelled 99.5 11
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
78c4a25A_
not modelled 99.5 12
PDB header:metal binding protein
Chain: A: PDB Molecule:ferritin dps family protein;
PDBTitle: x-ray structure dps from kineococcus radiotolerans in2 complex with mn (ii) ions.
79c4r42B_
not modelled 99.5 18
PDB header:oxidoreductase
Chain: B: PDB Molecule:alr3090 protein;
PDBTitle: crystal structure of katb, a manganese catalase from anabaena pcc7120
80c2pybC_
not modelled 99.4 6
PDB header:metal transport
Chain: C: PDB Molecule:neutrophil activating protein;
PDBTitle: napa protein from borrelia burgdorferi
81d2fzfa1
not modelled 99.2 15
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
82d1zs3a1
not modelled 99.0 14
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
83d1vjxa_
not modelled 99.0 16
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
84d1zuja1
not modelled 98.9 16
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
85d1jkva_
not modelled 98.7 12
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Manganese catalase (T-catalase)
86c2ib0A_
not modelled 98.6 13
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:conserved hypothetical alanine rich protein;
PDBTitle: crystal structure of a conserved hypothetical protein, rv2844, from2 mycobacterium tuberculosis
87d2ib0a1
not modelled 98.6 13
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Rv2844-like
88c4etrA_
not modelled 98.5 14
PDB header:unknown function
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: x-ray structure of pa2169 from pseudomonas aeruginosa
89d2cwla1
not modelled 97.7 11
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Manganese catalase (T-catalase)
90c3hiuB_
not modelled 97.6 16
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: the crystal structure of protein (xcc3681) from xanthomonas2 campestris pv. campestris str. atcc 33913
91c3q4nA_
not modelled 97.5 10
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein mj0754;
PDBTitle: crystal structure of hypothetical protein mj0754 from methanococcus2 jannaschii dsm 2661
92c5n5eM_
not modelled 97.1 25
PDB header:oxidoreductase
Chain: M: PDB Molecule:pfc_05175;
PDBTitle: crystal structure of encapsulated ferritin domain from pyrococcus2 furiosus pfc_05175
93d1afra_
not modelled 96.5 15
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ribonucleotide reductase-like
94d1za0a1
not modelled 96.4 19
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ribonucleotide reductase-like
95c3hl1B_
not modelled 96.4 10
PDB header:metal binding protein
Chain: B: PDB Molecule:ferritin like protein;
PDBTitle: crystal structure of a ferritin like protein (cc_0557) from2 caulobacter vibrioides at 1.95 a resolution
96d2gs4a1
not modelled 95.7 16
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:YciF-like
97d2gyqa1
not modelled 95.0 14
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:YciF-like
98c5n5fC_
not modelled 94.4 27
PDB header:oxidoreductase
Chain: C: PDB Molecule:encapsulated ferritin;
PDBTitle: crystal structure of haliangium ochraceum encapsulated ferritin
99d1zpya1
not modelled 93.7 17
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:half-ferritin
100c5da5R_
not modelled 91.8 23
PDB header:oxidoreductase
Chain: R: PDB Molecule:rru_a0973;
PDBTitle: crystal structure of rhodospirillum rubrum rru_a0973
101c5ux1D_
not modelled 91.3 18
PDB header:lyase
Chain: D: PDB Molecule:trna-(ms(2)io(6)a)-hydroxylase-like;
PDBTitle: protein 43 with aldehyde deformylating oxygenase activity from2 synechococcus
102c3dhiA_
not modelled 88.7 10
PDB header:oxidoreductase
Chain: A: PDB Molecule:toluene 4-monooxygenase hydroxylase alpha subunit;
PDBTitle: crystal structure of reduced toluene 4-monoxygenase hydroxylase2 complexed with effector protein
103c3fseB_
not modelled 88.2 11
PDB header:hydrolase
Chain: B: PDB Molecule:two-domain protein containing dj-1/thij/pfpi-like and
PDBTitle: crystal structure of a two-domain protein containing dj-1/thij/pfpi-2 like and ferritin-like domains (ava_4496) from anabaena variabilis3 atcc 29413 at 1.90 a resolution
104d2itba1
not modelled 81.0 14
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:MiaE-like
105c1u7mB_
not modelled 71.7 13
PDB header:de novo protein
Chain: B: PDB Molecule:four-helix bundle model;
PDBTitle: solution structure of a diiron protein model: due ferri(ii)2 turn mutant
106c3dhgB_
not modelled 69.6 11
PDB header:oxidoreductase
Chain: B: PDB Molecule:toluene 4-monooxygenase hydroxylase beta subunit;
PDBTitle: crystal structure of toluene 4-monoxygenase hydroxylase
107d2incb1
not modelled 68.0 13
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ribonucleotide reductase-like
108c1lt1G_
not modelled 66.6 13
PDB header:de novo protein
Chain: G: PDB Molecule:l13g-df1;
PDBTitle: sliding helix induced change of coordination geometry in a2 model di-mn(ii) protein
109c4dr0A_
not modelled 53.4 12
PDB header:oxidoreductase
Chain: A: PDB Molecule:ribonucleoside-diphosphate reductase subunit beta;
PDBTitle: crystal structure of bacillus subtilis dimanganese(ii) nrdf
110c6gp2A_
not modelled 52.2 11
PDB header:oxidoreductase
Chain: A: PDB Molecule:ribonucleoside-diphosphate reductase beta chain;
PDBTitle: ribonucleotide reductase class ie r2 from mesoplasma florum, dopa-2 active form
111d3dhza1
not modelled 51.8 13
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ribonucleotide reductase-like
112d1oquc_
not modelled 48.4 13
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ribonucleotide reductase-like
113d1smsa_
not modelled 47.3 9
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ribonucleotide reductase-like
114c4bmtB_
not modelled 45.2 13
PDB header:oxidoreductase
Chain: B: PDB Molecule:ribonucleoside-diphosphate reductase subunit beta;
PDBTitle: crystal structure of ribonucleotide reductase di-iron nrdf2 from bacillus cereus
115d1w68a_
not modelled 44.7 12
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ribonucleotide reductase-like
116c1smqD_
not modelled 43.6 11
PDB header:oxidoreductase
Chain: D: PDB Molecule:ribonucleoside-diphosphate reductase small chain
PDBTitle: structure of the ribonucleotide reductase rnr2 homodimer2 from saccharomyces cerevisiae
117c2rccC_
not modelled 43.1 13
PDB header:oxidoreductase
Chain: C: PDB Molecule:ribonucleoside-diphosphate reductase subunit beta;
PDBTitle: crystal structure of putative class i ribonucleotide reductase2 (np_241368.1) from bacillus halodurans at 1.90 a resolution
118c1yfdA_
not modelled 42.6 18
PDB header:oxidoreductase
Chain: A: PDB Molecule:ribonucleoside-diphosphate reductase 1 beta chain;
PDBTitle: crystal structure of the y122h mutant of ribonucleotide reductase r22 protein from e. coli
119c3b5oA_
not modelled 41.6 15
PDB header:oxidoreductase
Chain: A: PDB Molecule:cadd-like protein of unknown function;
PDBTitle: crystal structure of a cadd-like protein of unknown function2 (npun_f6505) from nostoc punctiforme pcc 73102 at 1.35 a resolution
120d1jk0b_
not modelled 40.5 9
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ribonucleotide reductase-like

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