Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3857Ac_(RVBD3857Ac)_4329923_4330063
DateSat Aug 10 22:05:04 BST 2019
Unique Job ID2baf60d26476f69c
SequenceVRTNPVPRSR ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:21.609 Y:25.499 Z:27.575
Model (left) based on template c3kdpD_
Top template information
PDB header:hydrolase
Chain: D: PDB Molecule:sodium/potassium-transporting atpase subunit beta-1;
PDBTitle: crystal structure of the sodium-potassium pump
Confidence and coverage
Confidence: 14.6% Coverage: 37%
17 residues ( 37% of your sequence) have been modelled with 14.6% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
Please note: You must be registered and logged in to use Phyrealarm.
3D viewing
Interactive 3D view in JSmol
For other options to view your downloaded structure offline see the FAQ

Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3kdpD_



14.6 35
PDB header:hydrolase
Chain: D: PDB Molecule:sodium/potassium-transporting atpase subunit beta-1;
PDBTitle: crystal structure of the sodium-potassium pump
2c5vfbB_



14.0 43
PDB header:transferase
Chain: B: PDB Molecule:malate synthase g;
PDBTitle: 1.36 angstrom resolution crystal structure of malate synthase g from2 pseudomonas aeruginosa in complex with glycolic acid.
3d1n8ia_



13.2 31
Fold:TIM beta/alpha-barrel
Superfamily:Malate synthase G
Family:Malate synthase G
4c1ezeA_



9.7 67
PDB header:transferase inhibitor
Chain: A: PDB Molecule:cholesteryl ester transferase inhibitor protein;
PDBTitle: structural studies of a baboon (papio sp.) plasma protein2 inhibitor of cholesteryl ester transferase.
5c2w85A_



8.3 21
PDB header:protein transport
Chain: A: PDB Molecule:peroxisomal membrane anchor protein pex14;
PDBTitle: structure of pex14 in complex with pex19
6d1d8ca_



7.3 33
Fold:TIM beta/alpha-barrel
Superfamily:Malate synthase G
Family:Malate synthase G
7d2ooka1



6.4 43
Fold:SpoIIaa-like
Superfamily:SpoIIaa-like
Family:Sfri0576-like
8c2l4vA_



6.1 43
PDB header:hydrolase inhibitor
Chain: A: PDB Molecule:cystatin;
PDBTitle: three dimensional structure of pineapple cystatin
9c3mbgC_



5.7 33
PDB header:flavoprotein
Chain: C: PDB Molecule:fad-linked sulfhydryl oxidase alr;
PDBTitle: crystal structure of human augmenter of liver regeneration (alr)

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite