Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3857c_(-)_4329595_4329792
DateSat Aug 10 22:05:03 BST 2019
Unique Job ID0e8ba84cda7c3b72
SequenceMNCALGFDTK ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:47.838 Y:34.004 Z:27.170
Model (left) based on template c6g90T_
Top template information
PDB header:splicing
Chain: T: PDB Molecule:pre-mrna-splicing factor prp9;
PDBTitle: prespliceosome structure provides insight into spliceosome assembly2 and regulation (map a2)
Confidence and coverage
Confidence: 23.8% Coverage: 31%
20 residues ( 31% of your sequence) have been modelled with 23.8% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
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3D viewing
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c6g90T_



23.8 20
PDB header:splicing
Chain: T: PDB Molecule:pre-mrna-splicing factor prp9;
PDBTitle: prespliceosome structure provides insight into spliceosome assembly2 and regulation (map a2)
2c5z58w_



19.0 25
PDB header:splicing
Chain: W: PDB Molecule:
PDBTitle: cryo-em structure of a human activated spliceosome (early bact) at 4.92 angstrom.
3d1dv0a_



11.3 31
Fold:RuvA C-terminal domain-like
Superfamily:UBA-like
Family:UBA domain
4c6hwhW_



11.0 16
PDB header:electron transport
Chain: W: PDB Molecule:cytochrome c oxidase subunit 3;
PDBTitle: structure of a functional obligate respiratory supercomplex from2 mycobacterium smegmatis
5c2ks1A_



10.4 47
PDB header:transferase
Chain: A: PDB Molecule:receptor tyrosine-protein kinase erbb-2;
PDBTitle: heterodimeric association of transmembrane domains of erbb1 and erbb22 receptors enabling kinase activation
6c2jwaA_



10.4 47
PDB header:transferase
Chain: A: PDB Molecule:receptor tyrosine-protein kinase erbb-2;
PDBTitle: erbb2 transmembrane segment dimer spatial structure
7d3e46a1



9.3 46
Fold:RuvA C-terminal domain-like
Superfamily:UBA-like
Family:UBA domain
8d1rh5b_



7.8 22
Fold:Single transmembrane helix
Superfamily:Preprotein translocase SecE subunit
Family:Preprotein translocase SecE subunit
9d2peqa1



7.5 27
Fold:RbcX-like
Superfamily:RbcX-like
Family:RbcX-like
10c2peoA_



6.1 23
PDB header:chaperone
Chain: A: PDB Molecule:rbcx protein;
PDBTitle: crystal structure of rbcx from anabaena ca
11d2peoa1



6.1 23
Fold:RbcX-like
Superfamily:RbcX-like
Family:RbcX-like
12c2penE_



5.9 27
PDB header:chaperone
Chain: E: PDB Molecule:orf134;
PDBTitle: crystal structure of rbcx, crystal form i
13c5yq7H_



5.3 67
PDB header:photosynthesis
Chain: H: PDB Molecule:alpha subunit of light-harvesting 1;
PDBTitle: cryo-em structure of the rc-lh core complex from roseiflexus2 castenholzii
14d2glia1



5.2 31
Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
15c1afoB_



5.1 55
PDB header:integral membrane protein
Chain: B: PDB Molecule:glycophorin a;
PDBTitle: dimeric transmembrane domain of human glycophorin a, nmr,2 20 structures
16c4ogqE_



5.1 42
PDB header:electron transport
Chain: E: PDB Molecule:cytochrome b6-f complex subunit 6;
PDBTitle: internal lipid architecture of the hetero-oligomeric cytochrome b6f2 complex
17c2zt9E_



5.1 42
PDB header:photosynthesis
Chain: E: PDB Molecule:cytochrome b6-f complex subunit 6;
PDBTitle: crystal structure of the cytochrome b6f complex from nostoc sp. pcc2 7120
18c4h44E_



5.1 42
PDB header:photosynthesis
Chain: E: PDB Molecule:cytochrome b6-f complex subunit 6;
PDBTitle: 2.70 a cytochrome b6f complex structure from nostoc pcc 7120

Binding site prediction 

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below