Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3862c_(whiB6)_4338349_4338699
DateSat Aug 10 22:05:04 BST 2019
Unique Job ID84653757c4df0b19
SequenceMRYAFAAEAT ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:21.925 Y:25.751 Z:32.682
Model (left) based on template c5oayA_
Top template information
PDB header:signaling protein
Chain: A: PDB Molecule:transcriptional regulator whib1;
PDBTitle: m. tuberculosis [4fe-4s] protein whib1 is a four-helix bundle that2 forms a no-sensitive complex with sigmaa and regulates the major3 virulence factor esx-1
Confidence and coverage
Confidence: 97.8% Coverage: 41%
48 residues ( 41% of your sequence) have been modelled with 97.8% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5oayA_



97.8 29
PDB header:signaling protein
Chain: A: PDB Molecule:transcriptional regulator whib1;
PDBTitle: m. tuberculosis [4fe-4s] protein whib1 is a four-helix bundle that2 forms a no-sensitive complex with sigmaa and regulates the major3 virulence factor esx-1
2c3shgB_



15.0 44
PDB header:transferase/protein binding
Chain: B: PDB Molecule:vbha;
PDBTitle: vbht fic protein from bartonella schoenbuchensis in complex with vbha2 antitoxin
3c1fjnA_



14.5 27
PDB header:antimicrobial protein
Chain: A: PDB Molecule:defensin mgd-1;
PDBTitle: solution structure and activity of the four disulfide bond2 mediterranean mussel defensin mgd-1
4d1fjna_



14.5 27
Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:Scorpion toxin-like
Family:Defensin MGD-1
5d1vmda_



13.6 32
Fold:Methylglyoxal synthase-like
Superfamily:Methylglyoxal synthase-like
Family:Methylglyoxal synthase, MgsA
6c5m73D_



12.8 80
PDB header:rna binding protein
Chain: D: PDB Molecule:signal recognition particle subunit srp72;
PDBTitle: structure of the human srp s domain with srp72 rna-binding domain
7c3u2aA_



11.3 53
PDB header:hydrolase
Chain: A: PDB Molecule:ggdef family protein;
PDBTitle: adaptor dependent degradation of a cell-cycle regulator reveals2 diversity in substrate architectures
8c4b2nB_



10.0 24
PDB header:electron transport
Chain: B: PDB Molecule:70 kda protein;
PDBTitle: latex oxygenase roxa
9c2hg4A_



9.7 26
PDB header:transferase
Chain: A: PDB Molecule:6-deoxyerythronolide b synthase;
PDBTitle: structure of the ketosynthase-acyltransferase didomain of module 52 from debs.
10c6c8vA_



9.0 20
PDB header:oxidoreductase
Chain: A: PDB Molecule:coenzyme pqq synthesis protein e;
PDBTitle: x-ray structure of pqqe from methylobacterium extorquens
11c2pcoA_



8.6 33
PDB header:toxin
Chain: A: PDB Molecule:latarcin-1;
PDBTitle: spatial structure and membrane permeabilization for2 latarcin-1, a spider antimicrobial peptide
12c1y7nA_



8.2 31
PDB header:protein transport
Chain: A: PDB Molecule:amyloid beta a4 precursor protein-binding family
PDBTitle: solution structure of the second pdz domain of the human2 neuronal adaptor x11alpha
13d1bm8a_



8.1 33
Fold:DNA-binding domain of Mlu1-box binding protein MBP1
Superfamily:DNA-binding domain of Mlu1-box binding protein MBP1
Family:DNA-binding domain of Mlu1-box binding protein MBP1
14d1prtc1



7.4 39
Fold:OB-fold
Superfamily:Bacterial enterotoxins
Family:Bacterial AB5 toxins, B-subunits
15c5m73H_



7.2 60
PDB header:rna binding protein
Chain: H: PDB Molecule:signal recognition particle subunit srp72;
PDBTitle: structure of the human srp s domain with srp72 rna-binding domain
16c3p8cD_



7.1 40
PDB header:protein binding
Chain: D: PDB Molecule:wiskott-aldrich syndrome protein family member 1;
PDBTitle: structure and control of the actin regulatory wave complex
17c4jvyA_



7.0 35
PDB header:rna binding protein
Chain: A: PDB Molecule:female germline-specific tumor suppressor gld-1;
PDBTitle: structure of the star (signal transduction and activation of rna)2 domain of gld-1 bound to rna
18c2ksnA_



6.7 18
PDB header:signaling protein
Chain: A: PDB Molecule:ubiquitin domain-containing protein 2;
PDBTitle: solution structure of the n-terminal domain of dc-ubp/ubtd2
19d2nx2a1



6.5 29
Fold:MCP/YpsA-like
Superfamily:MCP/YpsA-like
Family:YpsA-like
20c3fptC_



6.2 50
PDB header:immune system
Chain: C: PDB Molecule:evasin-1;
PDBTitle: the crystal structure of the complex between evasin-1 and2 ccl3
21c4jvhA_



not modelled 6.2 43
PDB header:rna binding protein
Chain: A: PDB Molecule:protein quaking;
PDBTitle: structure of the star domain of quaking protein in complex with rna
22c1ihqA_



not modelled 6.1 50
PDB header:de novo protein
Chain: A: PDB Molecule:chimeric peptide glytm1bzip: tropomyosin alpha
PDBTitle: glytm1bzip: a chimeric peptide model of the n-terminus of a2 rat short alpha tropomyosin with the n-terminus encoded by3 exon 1b
23d1ra0a1



not modelled 5.7 71
Fold:Composite domain of metallo-dependent hydrolases
Superfamily:Composite domain of metallo-dependent hydrolases
Family:Cytosine deaminase
24c3danA_



not modelled 5.7 20
PDB header:lyase
Chain: A: PDB Molecule:cytochrome p450 74a2;
PDBTitle: crystal structure of allene oxide synthase
25d1u3ba2



not modelled 5.6 31
Fold:PDZ domain-like
Superfamily:PDZ domain-like
Family:PDZ domain
26c3kopB_



not modelled 5.5 19
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of protein with a cyclophilin-like fold2 (yp_831253.1) from arthrobacter sp. fb24 at 1.90 a resolution
27d1ixda_



not modelled 5.3 16
Fold:SH3-like barrel
Superfamily:Cap-Gly domain
Family:Cap-Gly domain
28c3c00B_



not modelled 5.1 27
PDB header:membrane protein, protein transport
Chain: B: PDB Molecule:escu;
PDBTitle: crystal structural of the mutated g247t escu/spas c-terminal domain
29c3awmA_



not modelled 5.1 26
PDB header:oxidoreductase
Chain: A: PDB Molecule:fatty acid alpha-hydroxylase;
PDBTitle: cytochrome p450sp alpha (cyp152b1) wild-type with palmitic acid
30c2rrlA_



not modelled 5.1 28
PDB header:protein transport
Chain: A: PDB Molecule:flagellar hook-length control protein;
PDBTitle: solution structure of the c-terminal domain of the flik

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