Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3864_(-)_4340448_4341656
DateSat Aug 10 22:05:04 BST 2019
Unique Job IDf8c4a8ce1bda4d92
SequenceMASGSGLCKT ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:55.554 Y:36.753 Z:99.009
Model (left) based on template c2g38B_
Top template information
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:ppe family protein;
PDBTitle: a pe/ppe protein complex from mycobacterium tuberculosis
Confidence and coverage
Confidence: 96.7% Coverage: 30%
121 residues ( 30% of your sequence) have been modelled with 96.7% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
Warning: 70% of your sequence is predicted disordered. Disordered regions cannot be meaningfully predicted.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2g38B_
96.7 7
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:ppe family protein;
PDBTitle: a pe/ppe protein complex from mycobacterium tuberculosis
2d2g38b1
96.7 7
Fold:Ferritin-like
Superfamily:PE/PPE dimer-like
Family:PPE
3c3zbhC_
96.2 19
PDB header:unknown function
Chain: C: PDB Molecule:esxa;
PDBTitle: geobacillus thermodenitrificans esxa crystal form i
4c3gvmA_
96.1 12
PDB header:viral protein
Chain: A: PDB Molecule:putative uncharacterized protein sag1039;
PDBTitle: structure of the homodimeric wxg-100 family protein from streptococcus2 agalactiae
5c4iogD_
96.1 12
PDB header:unknown function
Chain: D: PDB Molecule:secreted protein esxb;
PDBTitle: the crystal structure of a secreted protein esxb (wild-type, in p212 space group) from bacillus anthracis str. sterne
6c4lwsA_
95.8 6
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: esxa : esxb (semet) hetero-dimer from thermomonospora curvata
7c2vs0B_
95.8 20
PDB header:cell invasion
Chain: B: PDB Molecule:virulence factor esxa;
PDBTitle: structural analysis of homodimeric staphylococcal aureus2 virulence factor esxa
8c4lwsB_
95.0 16
PDB header:unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: esxa : esxb (semet) hetero-dimer from thermomonospora curvata
9d1wa8b1
94.5 14
Fold:Ferritin-like
Superfamily:EsxAB dimer-like
Family:ESAT-6 like
10c4wj2A_
94.2 12
PDB header:unknown function
Chain: A: PDB Molecule:antigen mtb48;
PDBTitle: mycobacterial protein
11d1wa8a1
93.3 17
Fold:Ferritin-like
Superfamily:EsxAB dimer-like
Family:ESAT-6 like
12c4i0xJ_
92.5 17
PDB header:structural genomics, unknown function
Chain: J: PDB Molecule:esat-6-like protein mab_3113;
PDBTitle: crystal structure of the mycobacterum abscessus esxef (mab_3112-2 mab_3113) complex
13c4i0xA_
89.9 17
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:esat-6-like protein mab_3112;
PDBTitle: crystal structure of the mycobacterum abscessus esxef (mab_3112-2 mab_3113) complex
14c5xfsB_
88.8 12
PDB header:protein transport
Chain: B: PDB Molecule:ppe family protein ppe15;
PDBTitle: crystal structure of pe8-ppe15 in complex with espg5 from m.2 tuberculosis
15c2kg7B_
87.8 5
PDB header:unknown function
Chain: B: PDB Molecule:esat-6-like protein esxh;
PDBTitle: structure and features of the complex formed by the tuberculosis2 virulence factors rv0287 and rv0288
16c4xy3A_
72.6 19
PDB header:protein transport
Chain: A: PDB Molecule:esx-1 secretion-associated protein espb;
PDBTitle: structure of esx-1 secreted protein espb
17c2kvpA_
50.8 9
PDB header:structural protein
Chain: A: PDB Molecule:talin-1;
PDBTitle: nmr structure of the talin vbs3 domain, 1815-1973
18c2cuoA_
48.9 50
PDB header:structural protein
Chain: A: PDB Molecule:collagen model peptide (pro-pro-gly)9;
PDBTitle: collagen model peptide (pro-pro-gly)9
19c2cuoE_
48.9 50
PDB header:structural protein
Chain: E: PDB Molecule:collagen model peptide (pro-pro-gly)9;
PDBTitle: collagen model peptide (pro-pro-gly)9
20c2cuoB_
48.9 50
PDB header:structural protein
Chain: B: PDB Molecule:collagen model peptide (pro-pro-gly)9;
PDBTitle: collagen model peptide (pro-pro-gly)9
21c2cuoD_
not modelled 48.9 50
PDB header:structural protein
Chain: D: PDB Molecule:collagen model peptide (pro-pro-gly)9;
PDBTitle: collagen model peptide (pro-pro-gly)9
22d1qkra_
not modelled 48.8 12
Fold:Four-helical up-and-down bundle
Superfamily:alpha-catenin/vinculin-like
Family:alpha-catenin/vinculin
23c2cuoF_
not modelled 47.7 48
PDB header:structural protein
Chain: F: PDB Molecule:collagen model peptide (pro-pro-gly)9;
PDBTitle: collagen model peptide (pro-pro-gly)9
24c2cuoC_
not modelled 47.7 48
PDB header:structural protein
Chain: C: PDB Molecule:collagen model peptide (pro-pro-gly)9;
PDBTitle: collagen model peptide (pro-pro-gly)9
25c3ah9A_
not modelled 41.4 50
PDB header:structural protein
Chain: A: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)9 at 1.1 a resolution
26c3ah9F_
not modelled 39.7 50
PDB header:structural protein
Chain: F: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)9 at 1.1 a resolution
27c3ah9B_
not modelled 37.0 48
PDB header:structural protein
Chain: B: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)9 at 1.1 a resolution
28c3ah9E_
not modelled 37.0 48
PDB header:structural protein
Chain: E: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)9 at 1.1 a resolution
29c3ah9C_
not modelled 37.0 48
PDB header:structural protein
Chain: C: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)9 at 1.1 a resolution
30c3ah9D_
not modelled 28.6 50
PDB header:structural protein
Chain: D: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)9 at 1.1 a resolution
31c2vqkA_
not modelled 25.2 21
PDB header:membrane protein
Chain: A: PDB Molecule:uncharacterized protein cgl0972;
PDBTitle: crystal structure of porb from corynebacterium glutamicum (2 crystal form iv)
32c2vqlD_
not modelled 24.1 21
PDB header:membrane protein
Chain: D: PDB Molecule:uncharacterized protein cgl0972;
PDBTitle: crystal structure of porb from corynebacterium glutamicum (2 crystal form iii)
33c6b87C_
not modelled 23.3 5
PDB header:membrane protein
Chain: C: PDB Molecule:tmhc2_e;
PDBTitle: crystal structure of transmembrane protein tmhc2_e
34c2ic6B_
not modelled 21.8 32
PDB header:viral protein
Chain: B: PDB Molecule:nucleocapsid protein;
PDBTitle: the coiled-coil domain (residues 1-75) structure of the sin nombre2 virus nucleocapsid protein
35c4anjA_
not modelled 20.9 11
PDB header:motor protein/metal-bindng protein
Chain: A: PDB Molecule:unconventional myosin-vi, green fluorescent protein;
PDBTitle: myosin vi (mdinsert2-gfp fusion) pre-powerstroke state (mg.adp.alf4)
36c3iykA_
not modelled 18.5 32
PDB header:virus
Chain: A: PDB Molecule:vp5;
PDBTitle: bluetongue virus structure reveals a sialic acid binding domain,2 amphipathic helices and a central coiled coil in the outer capsid3 proteins
37c4rvqA_
not modelled 18.1 15
PDB header:protein binding
Chain: A: PDB Molecule:pre-mrna splicing helicase-like protein;
PDBTitle: pwi-like domain of chaetomium thermophilum brr2
38c4ng2E_
not modelled 18.1 27
PDB header:transcription regulator
Chain: E: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of lasr lbd-qsla complex from pseudomonas aeruginosa
39d1ov9a_
not modelled 17.9 33
Fold:H-NS histone-like proteins
Superfamily:H-NS histone-like proteins
Family:H-NS histone-like proteins
40c2e4gB_
not modelled 17.8 10
PDB header:biosynthetic protein, flavoprotein
Chain: B: PDB Molecule:tryptophan halogenase;
PDBTitle: rebh with bound l-trp
41c5zt3A_
not modelled 17.1 36
PDB header:plant protein
Chain: A: PDB Molecule:wa352;
PDBTitle: crystal structure of wa352 from oryza sativa
42c2mc7A_
not modelled 16.3 22
PDB header:membrane protein
Chain: A: PDB Molecule:regulatory peptide;
PDBTitle: structure of salmonella mgtr
43c3a0mF_
not modelled 16.2 43
PDB header:structural protein
Chain: F: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-ovg-(ppg)4, monoclinic, twinned crystal
44c6j7bB_
not modelled 15.9 21
PDB header:hydrolase
Chain: B: PDB Molecule:small vasohibin-binding protein;
PDBTitle: crystal structure of vash1-svbp in complex with epoy
45d1ji5a_
not modelled 15.3 13
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
46c2d3fD_
not modelled 14.9 48
PDB header:structural protein
Chain: D: PDB Molecule:collagen model peptides (pro-pro-gly)4-pro-hyp-
PDBTitle: crystal structures of collagen model peptides (pro-pro-gly)2 4-pro-hyp-gly-(pro-pro-gly)4
47c2d3fE_
not modelled 14.9 48
PDB header:structural protein
Chain: E: PDB Molecule:collagen model peptides (pro-pro-gly)4-pro-hyp-
PDBTitle: crystal structures of collagen model peptides (pro-pro-gly)2 4-pro-hyp-gly-(pro-pro-gly)4
48c2d3fF_
not modelled 14.9 48
PDB header:structural protein
Chain: F: PDB Molecule:collagen model peptides (pro-pro-gly)4-pro-hyp-
PDBTitle: crystal structures of collagen model peptides (pro-pro-gly)2 4-pro-hyp-gly-(pro-pro-gly)4
49c1x1kD_
not modelled 14.9 48
PDB header:structural protein
Chain: D: PDB Molecule:host-guest peptide (pro-pro-gly)4-(pro-allohyp-
PDBTitle: host-guest peptide (pro-pro-gly)4-(pro-allohyp-gly)-(pro-2 pro-gly)4
50c1x1kA_
not modelled 14.9 48
PDB header:structural protein
Chain: A: PDB Molecule:host-guest peptide (pro-pro-gly)4-(pro-allohyp-
PDBTitle: host-guest peptide (pro-pro-gly)4-(pro-allohyp-gly)-(pro-2 pro-gly)4
51c1x1kC_
not modelled 14.9 48
PDB header:structural protein
Chain: C: PDB Molecule:host-guest peptide (pro-pro-gly)4-(pro-allohyp-
PDBTitle: host-guest peptide (pro-pro-gly)4-(pro-allohyp-gly)-(pro-2 pro-gly)4
52c1x1kB_
not modelled 14.9 48
PDB header:structural protein
Chain: B: PDB Molecule:host-guest peptide (pro-pro-gly)4-(pro-allohyp-
PDBTitle: host-guest peptide (pro-pro-gly)4-(pro-allohyp-gly)-(pro-2 pro-gly)4
53c6msrA_
not modelled 14.6 18
PDB header:de novo protein
Chain: A: PDB Molecule:pro-2.5;
PDBTitle: crystal structure of pro-2.5
54d1a9xa1
not modelled 14.1 15
Fold:Carbamoyl phosphate synthetase, large subunit connection domain
Superfamily:Carbamoyl phosphate synthetase, large subunit connection domain
Family:Carbamoyl phosphate synthetase, large subunit connection domain
55d1tqza1
not modelled 14.1 35
Fold:PH domain-like barrel
Superfamily:PH domain-like
Family:Necap1 N-terminal domain-like
56c3ggzC_
not modelled 13.8 11
PDB header:protein transport, endocytosis
Chain: C: PDB Molecule:increased sodium tolerance protein 1;
PDBTitle: crystal structure of s.cerevisiae ist1 n-terminal domain in complex2 with did2 mim motif
57c3ddlB_
not modelled 13.7 16
PDB header:transport protein
Chain: B: PDB Molecule:xanthorhodopsin;
PDBTitle: crystallographic structure of xanthorhodopsin, a light-driven ion pump2 with dual chromophore
58c3p42D_
not modelled 13.4 14
PDB header:unknown function
Chain: D: PDB Molecule:predicted protein;
PDBTitle: structure of gfcc (ymcb), protein encoded by the e. coli group 42 capsule operon
59c6j9hA_
not modelled 12.6 25
PDB header:peptide binding protein/hydrolase
Chain: A: PDB Molecule:small vasohibin-binding protein;
PDBTitle: crystal structure of svbp-vash1 complex
60c5x70D_
not modelled 12.6 24
PDB header:transferase/rna
Chain: D: PDB Molecule:mrna capping enzyme p5;
PDBTitle: crystal structure of rice dwarf virus p5 in complex with a ssrna2 oligomer
61c6j4uB_
not modelled 12.2 19
PDB header:hydrolase
Chain: B: PDB Molecule:small vasohibin-binding protein;
PDBTitle: structural basis of tubulin detyrosination by vasohibins-svbp enzyme2 complex and functional implications
62c2k48A_
not modelled 12.2 19
PDB header:viral protein
Chain: A: PDB Molecule:nucleoprotein;
PDBTitle: nmr structure of the n-terminal coiled coil domain of the2 andes hantavirus nucleocapsid protein
63c6cv0C_
not modelled 12.1 12
PDB header:viral protein
Chain: C: PDB Molecule:spike glycoprotein;
PDBTitle: cryo-electron microscopy structure of infectious bronchitis2 coronavirus spike protein
64c3j38T_
not modelled 11.6 21
PDB header:ribosome
Chain: T: PDB Molecule:40s ribosomal protein s19a;
PDBTitle: structure of the d. melanogaster 40s ribosomal proteins
65c6j4pB_
not modelled 11.4 20
PDB header:hydrolase
Chain: B: PDB Molecule:small vasohibin-binding protein;
PDBTitle: structural basis of tubulin detyrosination by vasohibins-svbp enzyme2 complex and functional implications
66c1x1kF_
not modelled 10.9 50
PDB header:structural protein
Chain: F: PDB Molecule:host-guest peptide (pro-pro-gly)4-(pro-allohyp-
PDBTitle: host-guest peptide (pro-pro-gly)4-(pro-allohyp-gly)-(pro-2 pro-gly)4
67c6j4sB_
not modelled 10.8 20
PDB header:hydrolase
Chain: B: PDB Molecule:small vasohibin-binding protein;
PDBTitle: structural basis of tubulin detyrosination by vasohibins-svbp enzyme2 complex and functional implications
68d1m98a1
not modelled 10.8 19
Fold:Orange carotenoid protein, N-terminal domain
Superfamily:Orange carotenoid protein, N-terminal domain
Family:Orange carotenoid protein, N-terminal domain
69c2dbfA_
not modelled 10.5 20
PDB header:signaling protein
Chain: A: PDB Molecule:nuclear factor nf-kappa-b p105 subunit;
PDBTitle: solution structure of the death domain in human nuclear2 factor nf-kappa-b p105 subunit
70c6j4vB_
not modelled 10.3 18
PDB header:hydrolase
Chain: B: PDB Molecule:small vasohibin-binding protein;
PDBTitle: structural basis of tubulin detyrosination by vasohibins-svbp enzyme2 complex and functional implications
71c6j8nA_
not modelled 10.3 21
PDB header:peptide binding protein/hydrolase
Chain: A: PDB Molecule:small vasohibin-binding protein;
PDBTitle: crystal structure of svbp-vash1 complex, mutation c169a of vash1
72c6j8nC_
not modelled 10.3 21
PDB header:peptide binding protein/hydrolase
Chain: C: PDB Molecule:small vasohibin-binding protein;
PDBTitle: crystal structure of svbp-vash1 complex, mutation c169a of vash1
73c3wt9A_
not modelled 10.2 8
PDB header:proton transport
Chain: A: PDB Molecule:rhodopsin i;
PDBTitle: crystal structure of the cell-free synthesized membrane protein,2 acetabularia rhodopsin i, at 1.48 angstrom
74c2i9nA_
not modelled 10.1 46
PDB header:de novo protein
Chain: A: PDB Molecule:mhb4a peptide;
PDBTitle: design of bivalent miniprotein consisting of two2 independent elements, a b-hairpin peptide and a-helix3 peptide, tethered by four glycines
75c3iq1A_
not modelled 10.0 16
PDB header:metal transport
Chain: A: PDB Molecule:dps family protein;
PDBTitle: crystal structure of dps protein from vibrio cholerae o1, a member of2 a broad superfamily of ferritin-like diiron-carboxylate proteins
76c3frrA_
not modelled 9.7 4
PDB header:protein binding
Chain: A: PDB Molecule:uncharacterized protein kiaa0174;
PDBTitle: structure of human ist1(ntd) - (residues 1-189)(p21)
77c6j9hC_
not modelled 9.6 22
PDB header:peptide binding protein/hydrolase
Chain: C: PDB Molecule:small vasohibin-binding protein;
PDBTitle: crystal structure of svbp-vash1 complex
78c1ciiA_
not modelled 9.5 11
PDB header:transmembrane protein
Chain: A: PDB Molecule:colicin ia;
PDBTitle: colicin ia
79c5jxlA_
not modelled 9.4 25
PDB header:motor protein
Chain: A: PDB Molecule:flagellar hook protein flge;
PDBTitle: cryo-em structure of the flagellar hook of campylobacter jejuni
80c3admC_
not modelled 9.2 44
PDB header:structural protein
Chain: C: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)4-hyp-ser-gly-(pro-pro-gly)4
81c2d3fA_
not modelled 9.2 46
PDB header:structural protein
Chain: A: PDB Molecule:collagen model peptides (pro-pro-gly)4-pro-hyp-
PDBTitle: crystal structures of collagen model peptides (pro-pro-gly)2 4-pro-hyp-gly-(pro-pro-gly)4
82c2d3fC_
not modelled 9.2 46
PDB header:structural protein
Chain: C: PDB Molecule:collagen model peptides (pro-pro-gly)4-pro-hyp-
PDBTitle: crystal structures of collagen model peptides (pro-pro-gly)2 4-pro-hyp-gly-(pro-pro-gly)4
83c2d3fB_
not modelled 9.2 46
PDB header:structural protein
Chain: B: PDB Molecule:collagen model peptides (pro-pro-gly)4-pro-hyp-
PDBTitle: crystal structures of collagen model peptides (pro-pro-gly)2 4-pro-hyp-gly-(pro-pro-gly)4
84c1x1kE_
not modelled 9.2 46
PDB header:structural protein
Chain: E: PDB Molecule:host-guest peptide (pro-pro-gly)4-(pro-allohyp-
PDBTitle: host-guest peptide (pro-pro-gly)4-(pro-allohyp-gly)-(pro-2 pro-gly)4
85c6ocgB_
not modelled 8.8 22
PDB header:hydrolase/hydrolase inhibitor
Chain: B: PDB Molecule:small vasohibin-binding protein;
PDBTitle: crystal structure of vash1-svbp complex bound with epoy
86c4ednL_
not modelled 8.7 46
PDB header:signaling protein/cell adhesion
Chain: L: PDB Molecule:paxillin;
PDBTitle: crystal structure of beta-parvin ch2 domain in complex with paxillin2 ld1 motif
87c3vf0A_
not modelled 8.6 10
PDB header:cell adhesion/protein binding
Chain: A: PDB Molecule:vinculin;
PDBTitle: raver1 in complex with metavinculin l954 deletion mutant
88c6ochD_
not modelled 8.5 22
PDB header:hydrolase/hydrolase inhibitor
Chain: D: PDB Molecule:small vasohibin-binding protein;
PDBTitle: crystal structure of vash1-svbp complex bound with parthenolide
89c2l7nA_
not modelled 8.5 11
PDB header:structural protein
Chain: A: PDB Molecule:talin-1;
PDBTitle: nmr structure of the b domain of talin
90c4ednQ_
not modelled 8.4 46
PDB header:signaling protein/cell adhesion
Chain: Q: PDB Molecule:paxillin;
PDBTitle: crystal structure of beta-parvin ch2 domain in complex with paxillin2 ld1 motif
91c2vzdD_
not modelled 8.4 46
PDB header:cell adhesion
Chain: D: PDB Molecule:paxillin;
PDBTitle: crystal structure of the c-terminal calponin homology2 domain of alpha parvin in complex with paxillin ld1 motif
92c6gbrA_
not modelled 8.2 19
PDB header:viral protein
Chain: A: PDB Molecule:polymerase cofactor vp35;
PDBTitle: crystal structure of the oligomerization domain of vp35 from reston2 virus, mercury derivative
93c1m98A_
not modelled 8.0 19
PDB header:unknown function
Chain: A: PDB Molecule:orange carotenoid protein;
PDBTitle: crystal structure of orange carotenoid protein
94c3admE_
not modelled 7.9 44
PDB header:structural protein
Chain: E: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)4-hyp-ser-gly-(pro-pro-gly)4
95c3admF_
not modelled 7.9 44
PDB header:structural protein
Chain: F: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)4-hyp-ser-gly-(pro-pro-gly)4
96c3admB_
not modelled 7.9 44
PDB header:structural protein
Chain: B: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)4-hyp-ser-gly-(pro-pro-gly)4
97c3admA_
not modelled 7.9 44
PDB header:structural protein
Chain: A: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)4-hyp-ser-gly-(pro-pro-gly)4
98c4hyjB_
not modelled 7.9 12
PDB header:proton transport
Chain: B: PDB Molecule:rhodopsin;
PDBTitle: crystal structure of exiguobacterium sibiricum rhodopsin
99c3wvbA_
not modelled 7.7 24
PDB header:hydrolase
Chain: A: PDB Molecule:upf0254 protein mj1251;
PDBTitle: hcgf from methanocaldococcus jannaschii

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below