Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3869_(-)_4345217_4346659
DateSat Aug 10 22:05:05 BST 2019
Unique Job ID148ed51281011ebe
SequenceMGLRLTTKVQ ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:46.494 Y:61.995 Z:98.108
Model (left) based on template c4kk7A_
Top template information
PDB header:protein transport
Chain: A: PDB Molecule:esx-1 secretion system protein eccb1;
PDBTitle: structure of eccb1 from the type vii (esx-1) secretion system of2 mycobacterium tuberculosis.
Confidence and coverage
Confidence:100.0% Coverage: 80%
385 residues ( 80% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c4kk7A_



100.0 100
PDB header:protein transport
Chain: A: PDB Molecule:esx-1 secretion system protein eccb1;
PDBTitle: structure of eccb1 from the type vii (esx-1) secretion system of2 mycobacterium tuberculosis.
2c5cyuA_



100.0 63
PDB header:membrane protein
Chain: A: PDB Molecule:conserved membrane protein;
PDBTitle: structure of the soluble domain of eccb1 from the mycobacterium2 smegmatis esx-1 secretion system.
3d2fb5a1



54.3 24
Fold:YojJ-like
Superfamily:YojJ-like
Family:YojJ-like
4c6navI_



44.0 20
PDB header:structural protein
Chain: I: PDB Molecule:m9ud72;
PDBTitle: cryo-em reconstruction of sulfolobus islandicus lal14/1 pilus
5c2k9yB_



23.0 23
PDB header:transferase
Chain: B: PDB Molecule:ephrin type-a receptor 2;
PDBTitle: epha2 dimeric structure in the lipidic bicelle at ph 5.0
6c2k9yA_



23.0 23
PDB header:transferase
Chain: A: PDB Molecule:ephrin type-a receptor 2;
PDBTitle: epha2 dimeric structure in the lipidic bicelle at ph 5.0
7c5xefA_



22.6 14
PDB header:chaperone
Chain: A: PDB Molecule:flagellar protein flis;
PDBTitle: crystal structure of flagellar chaperone from bacteria
8c2ciuA_



17.6 35
PDB header:protein transport
Chain: A: PDB Molecule:import inner membrane translocase subunit tim21
PDBTitle: structure of the ims domain of the mitochondrial import2 protein tim21 from s. cerevisiae
9d1vh6a_



17.3 27
Fold:Four-helical up-and-down bundle
Superfamily:Flagellar export chaperone FliS
Family:Flagellar export chaperone FliS
10c1vh6A_



17.3 27
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:flagellar protein flis;
PDBTitle: crystal structure of a flagellar protein
11c3c1zA_



17.0 13
PDB header:dna binding protein
Chain: A: PDB Molecule:dna integrity scanning protein disa;
PDBTitle: structure of the ligand-free form of a bacterial dna damage sensor2 protein
12c3k1iA_



16.4 23
PDB header:chaperone
Chain: A: PDB Molecule:flagellar protein;
PDBTitle: crystal strcture of flis-hp1076 complex in h. pylori
13c6gyyB_



15.8 17
PDB header:transferase
Chain: B: PDB Molecule:diadenylate cyclase;
PDBTitle: crystal structure of daca from staphylococcus aureus, n166c/t172c2 double mutant
14c6f0kA_



13.4 17
PDB header:membrane protein
Chain: A: PDB Molecule:cytochrome c family protein;
PDBTitle: alternative complex iii
15c6cfwE_



12.6 35
PDB header:membrane protein
Chain: E: PDB Molecule:mbh subunit;
PDBTitle: cryoem structure of a respiratory membrane-bound hydrogenase
16c6ch3B_



10.1 27
PDB header:structural protein
Chain: B: PDB Molecule:flagellar secretion chaperone flis,flagellin;
PDBTitle: crystal structure of the cytoplasmic domain of flha and flis-flic2 complex
17c2ixsB_



10.1 17
PDB header:hydrolase
Chain: B: PDB Molecule:sdai restriction endonuclease;
PDBTitle: structure of sdai restriction endonuclease
18d2nn6g2



9.9 27
Fold:Barrel-sandwich hybrid
Superfamily:Ribosomal L27 protein-like
Family:ECR1 N-terminal domain-like
19c2mhgA_



9.5 33
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: nmr structure of protein np_254181.1 from pseudomonas aeruginosa pa01
20d1y7ma1



9.0 11
Fold:L,D-transpeptidase catalytic domain-like
Superfamily:L,D-transpeptidase catalytic domain-like
Family:L,D-transpeptidase catalytic domain-like
21c4rv7C_



not modelled 9.0 10
PDB header:transferase
Chain: C: PDB Molecule:diadenylate cyclase;
PDBTitle: characterization of an essential diadenylate cyclase
22c2dn5A_



not modelled 7.8 32
PDB header:transcription
Chain: A: PDB Molecule:general transcription factor ii-i repeat domain-
PDBTitle: solution structure of rsgi ruh-057, a gtf2i domain in human2 cdna
23c2dzqA_



not modelled 7.8 27
PDB header:transcription
Chain: A: PDB Molecule:general transcription factor ii-i repeat domain-
PDBTitle: solution structure of rsgi ruh-066, a gtf2i domain in human2 cdna
24c3vwbA_



not modelled 7.6 27
PDB header:transcription/dna
Chain: A: PDB Molecule:virulence regulon transcriptional activator virb;
PDBTitle: crystal structure of virb core domain (se-met derivative) complexed2 with the cis-acting site (5-bru modifications) upstream icsb promoter
25c2l02B_



not modelled 7.5 6
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: solution nmr structure of protein bt2368 from bacteroides2 thetaiotaomicron, northeast structural genomics consortium target3 btr375
26c6hraD_



not modelled 7.4 25
PDB header:membrane protein
Chain: D: PDB Molecule:potassium-transporting atpase kdpf subunit;
PDBTitle: cryo-em structure of the kdpfabc complex in an e1 outward-facing state2 (state 1)
27c6hrbD_



not modelled 7.4 25
PDB header:membrane protein
Chain: D: PDB Molecule:potassium-transporting atpase kdpf subunit;
PDBTitle: cryo-em structure of the kdpfabc complex in an e2 inward-facing state2 (state 2)
28c5mrwH_



not modelled 7.4 25
PDB header:hydrolase
Chain: H: PDB Molecule:potassium-transporting atpase kdpf subunit;
PDBTitle: structure of the kdpfabc complex
29c5mrwD_



not modelled 7.4 25
PDB header:hydrolase
Chain: D: PDB Molecule:potassium-transporting atpase kdpf subunit;
PDBTitle: structure of the kdpfabc complex
30c5mrwL_



not modelled 7.4 25
PDB header:hydrolase
Chain: L: PDB Molecule:potassium-transporting atpase kdpf subunit;
PDBTitle: structure of the kdpfabc complex
31c2lf3A_



not modelled 7.4 56
PDB header:signaling protein
Chain: A: PDB Molecule:effector protein hopab3;
PDBTitle: solution nmr structure of hoppmal_281_385 from pseudomonas syringae2 pv. maculicola str. es4326, midwest center for structural genomics3 target apc40104.5 and northeast structural genomics consortium target4 pst2a
32c2d99A_



not modelled 7.4 23
PDB header:transcription
Chain: A: PDB Molecule:general transcription factor ii-i repeat domain-
PDBTitle: solution structure of rsgi ruh-048, a gtf2i domain in human2 cdna
33d2i5nh1



not modelled 7.3 28
Fold:PRC-barrel domain
Superfamily:PRC-barrel domain
Family:Photosynthetic reaction centre, H-chain, cytoplasmic domain
34d1q60a_



not modelled 7.2 18
Fold:GTF2I-like repeat
Superfamily:GTF2I-like repeat
Family:GTF2I-like repeat
35c2ed2A_



not modelled 7.2 18
PDB header:transcription
Chain: A: PDB Molecule:general transcription factor ii-i;
PDBTitle: solution structure of rsgi ruh-069, a gtf2i domain in human2 cdna
36d2zjru1



not modelled 7.2 21
Fold:L28p-like
Superfamily:L28p-like
Family:Ribosomal protein L28
37c3hshA_



not modelled 7.1 15
PDB header:protein binding
Chain: A: PDB Molecule:collagen alpha-1(xviii) chain;
PDBTitle: crystal structure of human collagen xviii trimerization domain2 (tetragonal crystal form)
38c2e3lA_



not modelled 7.0 23
PDB header:transcription
Chain: A: PDB Molecule:transcription factor gtf2ird2 beta;
PDBTitle: solution structure of rsgi ruh-068, a gtf2i domain in human2 cdna
39c2ejeA_



not modelled 6.7 14
PDB header:transcription
Chain: A: PDB Molecule:general transcription factor ii-i;
PDBTitle: solution structure of rsgi ruh-071, a gtf2i domain in human2 cdna
40c2dn4A_



not modelled 6.5 18
PDB header:transcription
Chain: A: PDB Molecule:general transcription factor ii-i;
PDBTitle: solution structure of rsgi ruh-060, a gtf2i domain in human2 cdna
41c2kncA_



not modelled 6.2 13
PDB header:cell adhesion
Chain: A: PDB Molecule:integrin alpha-iib;
PDBTitle: platelet integrin alfaiib-beta3 transmembrane-cytoplasmic2 heterocomplex
42c3n3fB_



not modelled 5.7 3
PDB header:protein binding
Chain: B: PDB Molecule:collagen alpha-1(xv) chain;
PDBTitle: crystal structure of the human collagen xv trimerization domain: a2 potent trimerizing unit common to multiplexin collagens
43c2dzrA_



not modelled 5.6 18
PDB header:transcription
Chain: A: PDB Molecule:general transcription factor ii-i repeat domain-
PDBTitle: solution structure of rsgi ruh-067, a gtf2i domain in human2 cdna
44c1ueoA_



not modelled 5.2 40
PDB header:antibiotic
Chain: A: PDB Molecule:penaeidin-3a;
PDBTitle: solution structure of the [t8a]-penaeidin-3
45d1vqou1



not modelled 5.2 18
Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:Ribosomal protein L24e
46c3ccjU_



not modelled 5.2 18
PDB header:ribosome
Chain: U: PDB Molecule:50s ribosomal protein l24e;
PDBTitle: structure of anisomycin resistant 50s ribosomal subunit: 23s rrna2 mutation c2534u

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Transmembrane helix prediction 

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