Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3874_(esxB)_4352452_4352754
DateSat Aug 10 22:05:05 BST 2019
Unique Job ID49fde18c8da3e1f6
SequenceMAEMKTDAAT ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:61.308 Y:59.430 Z:32.633
Model (left) based on template d1wa8a1
Top template information
Fold:Ferritin-like
Superfamily:EsxAB dimer-like
Family:ESAT-6 like
Confidence and coverage
Confidence: 99.9% Coverage: 99%
99 residues ( 99% of your sequence) have been modelled with 99.9% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in JSmol
For other options to view your downloaded structure offline see the FAQ

Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1wa8a1



99.9 100
Fold:Ferritin-like
Superfamily:EsxAB dimer-like
Family:ESAT-6 like
2c3gvmA_



99.8 13
PDB header:viral protein
Chain: A: PDB Molecule:putative uncharacterized protein sag1039;
PDBTitle: structure of the homodimeric wxg-100 family protein from streptococcus2 agalactiae
3c4iogD_



99.8 29
PDB header:unknown function
Chain: D: PDB Molecule:secreted protein esxb;
PDBTitle: the crystal structure of a secreted protein esxb (wild-type, in p212 space group) from bacillus anthracis str. sterne
4c3zbhC_



99.8 17
PDB header:unknown function
Chain: C: PDB Molecule:esxa;
PDBTitle: geobacillus thermodenitrificans esxa crystal form i
5c4lwsA_



99.8 26
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: esxa : esxb (semet) hetero-dimer from thermomonospora curvata
6c2vs0B_



99.8 14
PDB header:cell invasion
Chain: B: PDB Molecule:virulence factor esxa;
PDBTitle: structural analysis of homodimeric staphylococcal aureus2 virulence factor esxa
7d1wa8b1



99.7 15
Fold:Ferritin-like
Superfamily:EsxAB dimer-like
Family:ESAT-6 like
8c2kg7B_



99.6 16
PDB header:unknown function
Chain: B: PDB Molecule:esat-6-like protein esxh;
PDBTitle: structure and features of the complex formed by the tuberculosis2 virulence factors rv0287 and rv0288
9c4lwsB_



99.6 17
PDB header:unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: esxa : esxb (semet) hetero-dimer from thermomonospora curvata
10c4i0xA_



98.8 16
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:esat-6-like protein mab_3112;
PDBTitle: crystal structure of the mycobacterum abscessus esxef (mab_3112-2 mab_3113) complex
11c4i0xJ_



98.4 27
PDB header:structural genomics, unknown function
Chain: J: PDB Molecule:esat-6-like protein mab_3113;
PDBTitle: crystal structure of the mycobacterum abscessus esxef (mab_3112-2 mab_3113) complex
12d2gtsa1



98.3 15
Fold:Ferritin-like
Superfamily:HP0062-like
Family:HP0062-like
13d2g38b1



97.9 16
Fold:Ferritin-like
Superfamily:PE/PPE dimer-like
Family:PPE
14c2g38B_



97.9 16
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:ppe family protein;
PDBTitle: a pe/ppe protein complex from mycobacterium tuberculosis
15c5xfsB_



97.6 18
PDB header:protein transport
Chain: B: PDB Molecule:ppe family protein ppe15;
PDBTitle: crystal structure of pe8-ppe15 in complex with espg5 from m.2 tuberculosis
16c3ogiD_



95.6 18
PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:putative esat-6-like protein 7;
PDBTitle: crystal structure of the mycobacterium tuberculosis h37rv esxop2 complex (rv2346c-rv2347c)
17c4wj2A_



94.2 13
PDB header:unknown function
Chain: A: PDB Molecule:antigen mtb48;
PDBTitle: mycobacterial protein
18c3q4hB_



93.1 17
PDB header:metal transport
Chain: B: PDB Molecule:low molecular weight protein antigen 7;
PDBTitle: crystal structure of the mycobacterium smegmatis esxgh complex2 (msmeg_0620-msmeg_0621)
19c4xy3A_



90.2 15
PDB header:protein transport
Chain: A: PDB Molecule:esx-1 secretion-associated protein espb;
PDBTitle: structure of esx-1 secreted protein espb
20c3h6pD_



89.2 19
PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:esat-6-like protein esxr;
PDBTitle: crystal structure of rv3019c-rv3020c from mycobacterium tuberculosis
21c2kg7A_



not modelled 83.3 29
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein esxg (pe family protein);
PDBTitle: structure and features of the complex formed by the tuberculosis2 virulence factors rv0287 and rv0288
22c3h6pB_



not modelled 58.5 33
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:esat-6 like protein esxs;
PDBTitle: crystal structure of rv3019c-rv3020c from mycobacterium tuberculosis
23c3ogiC_



not modelled 51.2 14
PDB header:structural genomics, unknown function
Chain: C: PDB Molecule:putative esat-6-like protein 6;
PDBTitle: crystal structure of the mycobacterium tuberculosis h37rv esxop2 complex (rv2346c-rv2347c)
24c4gzrA_



not modelled 50.0 14
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:esat-6-like protein 6;
PDBTitle: crystal structure of the mycobacterium tuberculosis h37rv esxop2 (rv2346c-rv2347c) complex in space group c2221
25c3n8uB_



not modelled 47.8 12
PDB header:hydrolase
Chain: B: PDB Molecule:imelysin peptidase;
PDBTitle: crystal structure of an imelysin peptidase (bacova_03801) from2 bacteroides ovatus at 1.44 a resolution
26c3iv1F_



not modelled 25.4 5
PDB header:hydrolase
Chain: F: PDB Molecule:tumor susceptibility gene 101 protein;
PDBTitle: coiled-coil domain of tumor susceptibility gene 101
27c3g67A_



not modelled 25.3 2
PDB header:signaling protein
Chain: A: PDB Molecule:methyl-accepting chemotaxis protein;
PDBTitle: crystal structure of a soluble chemoreceptor from thermotoga2 maritima
28c2ym9C_



not modelled 24.7 5
PDB header:cell invasion
Chain: C: PDB Molecule:cell invasion protein sipd;
PDBTitle: sipd from salmonella typhimurium
29c1qu7A_



not modelled 22.8 18
PDB header:signaling protein
Chain: A: PDB Molecule:methyl-accepting chemotaxis protein i;
PDBTitle: four helical-bundle structure of the cytoplasmic domain of a serine2 chemotaxis receptor
30c2of5K_



not modelled 22.6 9
PDB header:apoptosis
Chain: K: PDB Molecule:leucine-rich repeat and death domain-containing protein;
PDBTitle: oligomeric death domain complex
31c3viqC_



not modelled 22.5 14
PDB header:recombination activator
Chain: C: PDB Molecule:swi5-dependent recombination dna repair protein 1;
PDBTitle: crystal structure of swi5-sfr1 complex from fission yeast
32c1ls4A_



not modelled 21.9 16
PDB header:lipid transport
Chain: A: PDB Molecule:apolipophorin-iii;
PDBTitle: nmr structure of apolipophorin-iii from locusta migratoria
33c1ichA_



not modelled 20.7 13
PDB header:apoptosis
Chain: A: PDB Molecule:tumor necrosis factor receptor-1;
PDBTitle: solution structure of the tumor necrosis factor receptor-12 death domain
34d1icha_



not modelled 20.7 13
Fold:DEATH domain
Superfamily:DEATH domain
Family:DEATH domain, DD
35c3kdqB_



not modelled 19.2 16
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized conserved protein;
PDBTitle: crystal structure of a functionally unknown conserved2 protein from corynebacterium diphtheriae.
36d1g4us1



not modelled 19.1 22
Fold:Four-helical up-and-down bundle
Superfamily:Bacterial GAP domain
Family:Bacterial GAP domain
37d2c2aa1



not modelled 18.7 13
Fold:ROP-like
Superfamily:Homodimeric domain of signal transducing histidine kinase
Family:Homodimeric domain of signal transducing histidine kinase
38d2p90a1



not modelled 18.7 15
Fold:Phosphorylase/hydrolase-like
Superfamily:Cgl1923-like
Family:Cgl1923-like
39c3ci9B_



not modelled 18.6 26
PDB header:transcription
Chain: B: PDB Molecule:heat shock factor-binding protein 1;
PDBTitle: crystal structure of the human hsbp1
40c3kltB_



not modelled 17.2 17
PDB header:structural protein
Chain: B: PDB Molecule:vimentin;
PDBTitle: crystal structure of a vimentin fragment
41d1aepa_



not modelled 16.0 16
Fold:Apolipophorin-III
Superfamily:Apolipophorin-III
Family:Apolipophorin-III
42c6f1ux_



not modelled 14.9 16
PDB header:motor protein
Chain: X: PDB Molecule:bicd family-like cargo adapter 1;
PDBTitle: n terminal region of dynein tail domains in complex with dynactin2 filament and bicdr-1
43c4kp4B_



not modelled 14.6 10
PDB header:transferase/signaling protein
Chain: B: PDB Molecule:osmolarity sensor protein envz, histidine kinase;
PDBTitle: deciphering cis-trans directionality and visualizing2 autophosphorylation in histidine kinases.
44c3uunA_



not modelled 14.4 14
PDB header:structural protein
Chain: A: PDB Molecule:dystrophin;
PDBTitle: crystal structure of n-terminal first spectrin repeat of dystrophin
45c6e6aB_



not modelled 14.0 12
PDB header:protein binding
Chain: B: PDB Molecule:inclusion membrane protein a;
PDBTitle: triclinic crystal form of inca g144a point mutant
46c2l10A_



not modelled 12.4 21
PDB header:structural protein
Chain: A: PDB Molecule:talin-1;
PDBTitle: structure of the talin rod residues, domain c
47c3d1nK_



not modelled 12.1 10
PDB header:transcription regulator/dna
Chain: K: PDB Molecule:pou domain, class 6, transcription factor 1;
PDBTitle: structure of human brn-5 transcription factor in complex2 with corticotrophin-releasing hormone gene promoter
48c2oqgA_



not modelled 11.8 23
PDB header:transcription
Chain: A: PDB Molecule:possible transcriptional regulator, arsr family protein;
PDBTitle: arsr-like transcriptional regulator from rhodococcus sp. rha1
49d2j0oa1



not modelled 11.8 19
Fold:IpaD-like
Superfamily:IpaD-like
Family:IpaD-like
50c2j0oA_



not modelled 11.8 19
PDB header:cell invasion
Chain: A: PDB Molecule:invasin ipad;
PDBTitle: shigella flexneri ipad
51c1zxjB_



not modelled 11.2 19
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:hypothetical protein mg377 homolog;
PDBTitle: crystal structure of the hypthetical mycoplasma protein, mpn555
52d1st6a6



not modelled 11.0 16
Fold:Four-helical up-and-down bundle
Superfamily:alpha-catenin/vinculin-like
Family:alpha-catenin/vinculin
53c2p90B_



not modelled 10.4 12
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:hypothetical protein cgl1923;
PDBTitle: the crystal structure of a protein of unknown function from2 corynebacterium glutamicum atcc 13032
54c3vp8B_



not modelled 10.3 10
PDB header:transcription
Chain: B: PDB Molecule:general transcriptional corepressor tup1;
PDBTitle: crystal structure of the n-terminal domain of the yeast general2 corepressor tup1p
55d1eq1a_



not modelled 10.3 22
Fold:Apolipophorin-III
Superfamily:Apolipophorin-III
Family:Apolipophorin-III
56c6ckoC_



not modelled 10.2 22
PDB header:dna binding protein/transferase
Chain: C: PDB Molecule:histone-lysine n-methyltransferase, h3 lysine-79 specific;
PDBTitle: crystal structure of an af10 fragment
57c6ckoD_



not modelled 10.2 22
PDB header:dna binding protein/transferase
Chain: D: PDB Molecule:histone-lysine n-methyltransferase, h3 lysine-79 specific;
PDBTitle: crystal structure of an af10 fragment
58c3sjbC_



not modelled 10.0 8
PDB header:hydrolase/transport protein
Chain: C: PDB Molecule:golgi to er traffic protein 1;
PDBTitle: crystal structure of s. cerevisiae get3 in the open state in complex2 with get1 cytosolic domain
59c5zhyA_



not modelled 9.3 7
PDB header:viral protein
Chain: A: PDB Molecule:spike glycoprotein, spike glycoprotein;
PDBTitle: structural characterization of the hcov-229e fusion core
60c3layF_



not modelled 8.8 18
PDB header:metal binding protein
Chain: F: PDB Molecule:zinc resistance-associated protein;
PDBTitle: alpha-helical barrel formed by the decamer of the zinc resistance-2 associated protein (stm4172) from salmonella enterica subsp. enterica3 serovar typhimurium str. lt2
61c4modB_



not modelled 8.2 8
PDB header:viral protein
Chain: B: PDB Molecule:hr1 of s protein, linker, hr2 of s protein;
PDBTitle: structure of the mers-cov fusion core
62c4pnaB_



not modelled 8.1 15
PDB header:de novo protein
Chain: B: PDB Molecule:cc-hept;
PDBTitle: a de novo designed heptameric coiled coil cc-hept
63c4pnaG_



not modelled 8.1 15
PDB header:de novo protein
Chain: G: PDB Molecule:cc-hept;
PDBTitle: a de novo designed heptameric coiled coil cc-hept
64c4pnaD_



not modelled 8.1 15
PDB header:de novo protein
Chain: D: PDB Molecule:cc-hept;
PDBTitle: a de novo designed heptameric coiled coil cc-hept
65c4pnaA_



not modelled 8.1 15
PDB header:de novo protein
Chain: A: PDB Molecule:cc-hept;
PDBTitle: a de novo designed heptameric coiled coil cc-hept
66c4pnaC_



not modelled 8.1 15
PDB header:de novo protein
Chain: C: PDB Molecule:cc-hept;
PDBTitle: a de novo designed heptameric coiled coil cc-hept
67c4pnaE_



not modelled 8.1 15
PDB header:de novo protein
Chain: E: PDB Molecule:cc-hept;
PDBTitle: a de novo designed heptameric coiled coil cc-hept
68c4pnaF_



not modelled 8.1 15
PDB header:de novo protein
Chain: F: PDB Molecule:cc-hept;
PDBTitle: a de novo designed heptameric coiled coil cc-hept
69d2j0na1



not modelled 7.9 19
Fold:IpaD-like
Superfamily:IpaD-like
Family:IpaD-like
70d1iwga5



not modelled 7.9 12
Fold:Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Superfamily:Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Family:Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
71c6b7nC_



not modelled 7.7 16
PDB header:viral protein
Chain: C: PDB Molecule:spike protein;
PDBTitle: cryo-electron microscopy structure of porcine delta coronavirus spike2 protein in the pre-fusion state
72c3myfB_



not modelled 7.5 9
PDB header:transferase
Chain: B: PDB Molecule:sensor protein;
PDBTitle: the crystal structure of the hpt domain from the hpt sensor hybrid2 histidine kinase from shewanella to 1.80a
73c3whlB_



not modelled 7.4 16
PDB header:hydrolase/chaperone
Chain: B: PDB Molecule:probable 26s proteasome regulatory subunit p27;
PDBTitle: crystal structure of nas2 n-terminal domain complexed with pan-rpt5c2 chimera
74c5zuvB_



not modelled 7.4 10
PDB header:viral protein, inhibitor
Chain: B: PDB Molecule:spike glycoprotein,spike glycoprotein,inhibitor ek1;
PDBTitle: crystal structure of the human coronavirus 229e hr1 motif in complex2 with pan-covs inhibitor ek1
75c1sj8A_



not modelled 7.4 17
PDB header:structural protein
Chain: A: PDB Molecule:talin 1;
PDBTitle: crystal structure of talin residues 482-789
76d1yvia1



not modelled 7.0 8
Fold:Four-helical up-and-down bundle
Superfamily:Histidine-containing phosphotransfer domain, HPT domain
Family:Phosphorelay protein-like
77d1e3oc2



not modelled 7.0 15
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:POU-specific domain
78d1he1a_



not modelled 6.9 9
Fold:Four-helical up-and-down bundle
Superfamily:Bacterial GAP domain
Family:Bacterial GAP domain
79c2r47C_



not modelled 6.8 11
PDB header:structural genomics, unknown function
Chain: C: PDB Molecule:uncharacterized protein mth_862;
PDBTitle: crystal structure of mth_862 protein of unknown function from2 methanothermobacter thermautotrophicus
80c6mtkA_



not modelled 6.7 9
PDB header:ligase
Chain: A: PDB Molecule:tryptophanyl-trna synthetase;
PDBTitle: crystal structure of tryptophanyl-trna synthetase from elizabethkingia2 anophelis nuhp1
81c1p68A_



not modelled 6.6 19
PDB header:de novo protein
Chain: A: PDB Molecule:de novo designed protein s-824;
PDBTitle: solution structure of s-824, a de novo designed four helix2 bundle
82c3lnrA_



not modelled 6.4 9
PDB header:signaling protein
Chain: A: PDB Molecule:aerotaxis transducer aer2;
PDBTitle: crystal structure of poly-hamp domains from the p. aeruginosa soluble2 receptor aer2
83c2l16A_



not modelled 6.3 13
PDB header:protein transport
Chain: A: PDB Molecule:sec-independent protein translocase protein tatad;
PDBTitle: solution structure of bacillus subtilits tatad protein in dpc micelles
84c5j0hA_



not modelled 6.3 16
PDB header:de novo protein
Chain: A: PDB Molecule:design construct 2l6hc3_13;
PDBTitle: de novo design of protein homo-oligomers with modular hydrogen bond2 network-mediated specificity
85c2ym0B_



not modelled 6.2 16
PDB header:cell invasion
Chain: B: PDB Molecule:cell invasion protein sipd;
PDBTitle: truncated sipd from salmonella typhimurium
86c2ym9D_



not modelled 6.1 3
PDB header:cell invasion
Chain: D: PDB Molecule:cell invasion protein sipd;
PDBTitle: sipd from salmonella typhimurium
87d1i0aa_



not modelled 6.1 10
Fold:L-aspartase-like
Superfamily:L-aspartase-like
Family:L-aspartase/fumarase
88d1h6gb1



not modelled 6.1 13
Fold:Four-helical up-and-down bundle
Superfamily:alpha-catenin/vinculin-like
Family:alpha-catenin/vinculin
89c4y66D_



not modelled 6.0 6
PDB header:cell cycle
Chain: D: PDB Molecule:putative tbpip family protein;
PDBTitle: crystal structure of giardia lamblia hop2-mnd1 complex
90c3vjfA_



not modelled 6.0 19
PDB header:de novo protein
Chain: A: PDB Molecule:wa20;
PDBTitle: crystal structure of de novo 4-helix bundle protein wa20
91d1wn0a1



not modelled 5.9 8
Fold:Four-helical up-and-down bundle
Superfamily:Histidine-containing phosphotransfer domain, HPT domain
Family:Phosphorelay protein-like
92d1vcsa1



not modelled 5.8 9
Fold:STAT-like
Superfamily:t-snare proteins
Family:t-snare proteins
93c3wz2C_



not modelled 5.7 16
PDB header:chaperone
Chain: C: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of pyrococcus furiosus pbaa, an archaeal homolog of2 proteasome-assembly chaperone
94c1wdfA_



not modelled 5.6 10
PDB header:viral protein
Chain: A: PDB Molecule:e2 glycoprotein;
PDBTitle: crystal structure of mhv spike protein fusion core
95c6cfzC_



not modelled 5.4 10
PDB header:nuclear protein
Chain: C: PDB Molecule:dad2;
PDBTitle: structure of the dash/dam1 complex shows its role at the yeast2 kinetochore-microtubule interface
96c5uxtA_



not modelled 5.2 20
PDB header:de novo protein
Chain: A: PDB Molecule:coiled-coil trimer with glu:trp:lys triad;
PDBTitle: coiled-coil trimer with glu:trp:lys triad
97c2ld3A_



not modelled 5.2 10
PDB header:motor protein
Chain: A: PDB Molecule:myosin vi;
PDBTitle: solution structure of myosin vi lever arm extension
98d1cuna2



not modelled 5.1 9
Fold:Spectrin repeat-like
Superfamily:Spectrin repeat
Family:Spectrin repeat

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite