Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3881c_(-)_4360721_4362103
DateSat Aug 10 22:05:06 BST 2019
Unique Job ID34ccb3ee15016fac
SequenceMTQSQTVTVD ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:43.039 Y:109.389 Z:53.587
Model (left) based on template c4wj2A_
Top template information
PDB header:unknown function
Chain: A: PDB Molecule:antigen mtb48;
PDBTitle: mycobacterial protein
Confidence and coverage
Confidence:100.0% Coverage: 56%
257 residues ( 56% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
Warning: 57% of your sequence is predicted disordered. Disordered regions cannot be meaningfully predicted.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c4wj2A_
100.0 27
PDB header:unknown function
Chain: A: PDB Molecule:antigen mtb48;
PDBTitle: mycobacterial protein
2c4xy3A_
100.0 98
PDB header:protein transport
Chain: A: PDB Molecule:esx-1 secretion-associated protein espb;
PDBTitle: structure of esx-1 secreted protein espb
3c2g38B_
99.0 15
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:ppe family protein;
PDBTitle: a pe/ppe protein complex from mycobacterium tuberculosis
4d2g38b1
99.0 15
Fold:Ferritin-like
Superfamily:PE/PPE dimer-like
Family:PPE
5c5xfsB_
98.9 21
PDB header:protein transport
Chain: B: PDB Molecule:ppe family protein ppe15;
PDBTitle: crystal structure of pe8-ppe15 in complex with espg5 from m.2 tuberculosis
6c3gvmA_
95.6 17
PDB header:viral protein
Chain: A: PDB Molecule:putative uncharacterized protein sag1039;
PDBTitle: structure of the homodimeric wxg-100 family protein from streptococcus2 agalactiae
7c2vs0B_
95.1 15
PDB header:cell invasion
Chain: B: PDB Molecule:virulence factor esxa;
PDBTitle: structural analysis of homodimeric staphylococcal aureus2 virulence factor esxa
8c3zbhC_
94.9 17
PDB header:unknown function
Chain: C: PDB Molecule:esxa;
PDBTitle: geobacillus thermodenitrificans esxa crystal form i
9c4iogD_
94.5 15
PDB header:unknown function
Chain: D: PDB Molecule:secreted protein esxb;
PDBTitle: the crystal structure of a secreted protein esxb (wild-type, in p212 space group) from bacillus anthracis str. sterne
10c6ogdB_
90.6 12
PDB header:toxin
Chain: B: PDB Molecule:toxin subunit yena2;
PDBTitle: cryo-em structure of yentca in its prepore state
11c3vkhA_
90.5 10
PDB header:motor protein
Chain: A: PDB Molecule:dynein heavy chain, cytoplasmic;
PDBTitle: x-ray structure of a functional full-length dynein motor domain
12c4cgkA_
88.1 7
PDB header:cell cycle
Chain: A: PDB Molecule:secreted 45 kda protein;
PDBTitle: crystal structure of the essential protein pcsb from streptococcus2 pneumoniae
13d1wa8a1
83.7 16
Fold:Ferritin-like
Superfamily:EsxAB dimer-like
Family:ESAT-6 like
14c4lwsA_
82.5 16
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: esxa : esxb (semet) hetero-dimer from thermomonospora curvata
15c4lwsB_
82.3 15
PDB header:unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: esxa : esxb (semet) hetero-dimer from thermomonospora curvata
16d1wa8b1
82.0 10
Fold:Ferritin-like
Superfamily:EsxAB dimer-like
Family:ESAT-6 like
17c2kg7B_
77.8 15
PDB header:unknown function
Chain: B: PDB Molecule:esat-6-like protein esxh;
PDBTitle: structure and features of the complex formed by the tuberculosis2 virulence factors rv0287 and rv0288
18c4rh7A_
59.3 11
PDB header:motor protein
Chain: A: PDB Molecule:green fluorescent protein/cytoplasmic dynein 2 heavy chain
PDBTitle: crystal structure of human cytoplasmic dynein 2 motor domain in2 complex with adp.vi
19c3ibpA_
58.9 13
PDB header:cell cycle
Chain: A: PDB Molecule:chromosome partition protein mukb;
PDBTitle: the crystal structure of the dimerization domain of escherichia coli2 structural maintenance of chromosomes protein mukb
20c4i0xJ_
55.0 13
PDB header:structural genomics, unknown function
Chain: J: PDB Molecule:esat-6-like protein mab_3113;
PDBTitle: crystal structure of the mycobacterum abscessus esxef (mab_3112-2 mab_3113) complex
21d2p90a1
not modelled 46.4 9
Fold:Phosphorylase/hydrolase-like
Superfamily:Cgl1923-like
Family:Cgl1923-like
22c5voxb_
not modelled 46.2 6
PDB header:hydrolase
Chain: B: PDB Molecule:v-type proton atpase subunit b;
PDBTitle: yeast v-atpase in complex with legionella pneumophila effector sidk2 (rotational state 1)
23c3vkgA_
not modelled 46.0 10
PDB header:motor protein
Chain: A: PDB Molecule:dynein heavy chain, cytoplasmic;
PDBTitle: x-ray structure of an mtbd truncation mutant of dynein motor domain
24c3vkgB_
not modelled 44.7 12
PDB header:motor protein
Chain: B: PDB Molecule:dynein heavy chain, cytoplasmic;
PDBTitle: x-ray structure of an mtbd truncation mutant of dynein motor domain
25c4nl6C_
not modelled 41.2 11
PDB header:splicing
Chain: C: PDB Molecule:survival motor neuron protein;
PDBTitle: structure of the full-length form of the protein smn found in healthy2 patients
26c6gy8B_
not modelled 38.4 16
PDB header:toxin
Chain: B: PDB Molecule:xaxa;
PDBTitle: crystal structure of xaxa from xenorhabdus nematophila
27c5jxpA_
not modelled 33.5 10
PDB header:hydrolase
Chain: A: PDB Molecule:asp/glu-specific dipeptidyl-peptidase;
PDBTitle: crystal structure of porphyromonas endodontalis dpp11 in alternate2 conformation
28c1vw2H_
not modelled 31.5 16
PDB header:toxin
Chain: H: PDB Molecule:tcda1;
PDBTitle: crystal structure of tcda1
29c3ojaB_
not modelled 27.8 6
PDB header:protein binding
Chain: B: PDB Molecule:anopheles plasmodium-responsive leucine-rich repeat protein
PDBTitle: crystal structure of lrim1/apl1c complex
30c3ghgI_
not modelled 27.5 5
PDB header:blood clotting
Chain: I: PDB Molecule:fibrinogen gamma chain;
PDBTitle: crystal structure of human fibrinogen
31c1x1kF_
not modelled 27.4 22
PDB header:structural protein
Chain: F: PDB Molecule:host-guest peptide (pro-pro-gly)4-(pro-allohyp-
PDBTitle: host-guest peptide (pro-pro-gly)4-(pro-allohyp-gly)-(pro-2 pro-gly)4
32c1gw4A_
not modelled 26.7 41
PDB header:high density lipoproteins
Chain: A: PDB Molecule:apoa-i;
PDBTitle: the helix-hinge-helix structural motif in human2 apolipoprotein a-i determined by nmr spectroscopy, 13 structure
33c3a19E_
not modelled 24.8 25
PDB header:structural protein
Chain: E: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-oog-(ppg)4_h monoclinic, twinned crystal
34c3a19C_
not modelled 24.8 25
PDB header:structural protein
Chain: C: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-oog-(ppg)4_h monoclinic, twinned crystal
35c3g67A_
not modelled 24.6 11
PDB header:signaling protein
Chain: A: PDB Molecule:methyl-accepting chemotaxis protein;
PDBTitle: crystal structure of a soluble chemoreceptor from thermotoga2 maritima
36c3a08B_
not modelled 22.4 25
PDB header:structural protein
Chain: B: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-oog-(ppg)4, monoclinic, twinned crystal
37c3a08A_
not modelled 22.4 25
PDB header:structural protein
Chain: A: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-oog-(ppg)4, monoclinic, twinned crystal
38d2q22a1
not modelled 22.0 7
Fold:Ava3019-like
Superfamily:Ava3019-like
Family:Ava3019-like
39c3a19D_
not modelled 21.8 21
PDB header:structural protein
Chain: D: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-oog-(ppg)4_h monoclinic, twinned crystal
40c2d3hE_
not modelled 21.7 26
PDB header:structural protein
Chain: E: PDB Molecule:collagen model peptides (pro-pro-gly)4-hyp-hyp-
PDBTitle: crystal structures of collagen model peptides (pro-pro-gly)2 4-hyp-hyp-gly-(pro-pro-gly)4
41c3a19F_
not modelled 19.5 22
PDB header:structural protein
Chain: F: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-oog-(ppg)4_h monoclinic, twinned crystal
42c3a08D_
not modelled 19.5 22
PDB header:structural protein
Chain: D: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-oog-(ppg)4, monoclinic, twinned crystal
43c2d3hD_
not modelled 19.5 22
PDB header:structural protein
Chain: D: PDB Molecule:collagen model peptides (pro-pro-gly)4-hyp-hyp-
PDBTitle: crystal structures of collagen model peptides (pro-pro-gly)2 4-hyp-hyp-gly-(pro-pro-gly)4
44c3a08E_
not modelled 19.4 27
PDB header:structural protein
Chain: E: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-oog-(ppg)4, monoclinic, twinned crystal
45c3ls1A_
not modelled 19.1 12
PDB header:photosynthesis
Chain: A: PDB Molecule:sll1638 protein;
PDBTitle: crystal structure of cyanobacterial psbq from synechocystis2 sp. pcc 6803 complexed with zn2+
46c1bg1A_
not modelled 18.6 9
PDB header:transcription/dna
Chain: A: PDB Molecule:protein (transcription factor stat3b);
PDBTitle: transcription factor stat3b/dna complex
47d1k78a1
not modelled 17.2 13
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Paired domain
48c2d3hA_
not modelled 16.8 23
PDB header:structural protein
Chain: A: PDB Molecule:collagen model peptides (pro-pro-gly)4-hyp-hyp-
PDBTitle: crystal structures of collagen model peptides (pro-pro-gly)2 4-hyp-hyp-gly-(pro-pro-gly)4
49c3a19B_
not modelled 16.8 23
PDB header:structural protein
Chain: B: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-oog-(ppg)4_h monoclinic, twinned crystal
50c2d3hB_
not modelled 16.8 23
PDB header:structural protein
Chain: B: PDB Molecule:collagen model peptides (pro-pro-gly)4-hyp-hyp-
PDBTitle: crystal structures of collagen model peptides (pro-pro-gly)2 4-hyp-hyp-gly-(pro-pro-gly)4
51c2cuoC_
not modelled 16.5 22
PDB header:structural protein
Chain: C: PDB Molecule:collagen model peptide (pro-pro-gly)9;
PDBTitle: collagen model peptide (pro-pro-gly)9
52c2cuoF_
not modelled 16.5 22
PDB header:structural protein
Chain: F: PDB Molecule:collagen model peptide (pro-pro-gly)9;
PDBTitle: collagen model peptide (pro-pro-gly)9
53c1y4cA_
not modelled 16.5 11
PDB header:de novo protein
Chain: A: PDB Molecule:maltose binding protein fused with designed
PDBTitle: designed helical protein fusion mbp
54d2gtsa1
not modelled 15.5 12
Fold:Ferritin-like
Superfamily:HP0062-like
Family:HP0062-like
55c3n4xB_
not modelled 15.3 17
PDB header:replication
Chain: B: PDB Molecule:monopolin complex subunit csm1;
PDBTitle: structure of csm1 full-length
56c4wvmB_
not modelled 15.3 10
PDB header:toxin
Chain: B: PDB Molecule:stonustoxin subunit beta;
PDBTitle: stonustoxin structure
57c3a19A_
not modelled 14.0 23
PDB header:structural protein
Chain: A: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-oog-(ppg)4_h monoclinic, twinned crystal
58c2d3hC_
not modelled 14.0 23
PDB header:structural protein
Chain: C: PDB Molecule:collagen model peptides (pro-pro-gly)4-hyp-hyp-
PDBTitle: crystal structures of collagen model peptides (pro-pro-gly)2 4-hyp-hyp-gly-(pro-pro-gly)4
59c5dolB_
not modelled 13.8 12
PDB header:replication
Chain: B: PDB Molecule:initiation-control protein yaba;
PDBTitle: crystal structure of yaba amino-terminal domain from bacillus subtilis
60c5gasN_
not modelled 13.5 9
PDB header:hydrolase
Chain: N: PDB Molecule:archaeal/vacuolar-type h+-atpase subunit i;
PDBTitle: thermus thermophilus v/a-atpase, conformation 2
61c3a7oB_
not modelled 13.2 18
PDB header:protein transport
Chain: B: PDB Molecule:autophagy protein 16;
PDBTitle: the crystal structure of the coiled-coil domain of2 saccharomyces cerevisiae atg16
62c2w6bA_
not modelled 13.2 21
PDB header:signaling protein
Chain: A: PDB Molecule:rho guanine nucleotide exchange factor 7;
PDBTitle: crystal structure of the trimeric beta-pix coiled-coil2 domain
63c1deqF_
not modelled 13.1 7
PDB header:blood clotting
Chain: F: PDB Molecule:fibrinogen (gamma chain);
PDBTitle: the crystal structure of modified bovine fibrinogen (at ~42 angstrom resolution)
64c3ah9C_
not modelled 12.9 24
PDB header:structural protein
Chain: C: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)9 at 1.1 a resolution
65c3ah9B_
not modelled 12.9 24
PDB header:structural protein
Chain: B: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)9 at 1.1 a resolution
66c3ah9E_
not modelled 12.9 24
PDB header:structural protein
Chain: E: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)9 at 1.1 a resolution
67c2d3hF_
not modelled 12.5 27
PDB header:structural protein
Chain: F: PDB Molecule:collagen model peptides (pro-pro-gly)4-hyp-hyp-
PDBTitle: crystal structures of collagen model peptides (pro-pro-gly)2 4-hyp-hyp-gly-(pro-pro-gly)4
68c3tnuA_
not modelled 11.0 3
PDB header:cytosolic protein
Chain: A: PDB Molecule:keratin, type i cytoskeletal 14;
PDBTitle: heterocomplex of coil 2b domains of human intermediate filament2 proteins, keratin 5 (krt5) and keratin 14 (krt14)
69c1uc5M_
not modelled 10.9 27
PDB header:lyase
Chain: M: PDB Molecule:diol dehydrase gamma subunit;
PDBTitle: structure of diol dehydratase complexed with (r)-1,2-2 propanediol
70d1eexg_
not modelled 10.9 27
Fold:Open three-helical up-and-down bundle
Superfamily:Diol dehydratase, gamma subunit
Family:Diol dehydratase, gamma subunit
71d1iwpg_
not modelled 10.9 20
Fold:Open three-helical up-and-down bundle
Superfamily:Diol dehydratase, gamma subunit
Family:Diol dehydratase, gamma subunit
72c5jxfA_
not modelled 10.7 6
PDB header:hydrolase
Chain: A: PDB Molecule:asp/glu-specific dipeptidyl-peptidase;
PDBTitle: crystal structure of flavobacterium psychrophilum dpp11 in complex2 with dipeptide arg-asp
73c2cuoD_
not modelled 10.5 23
PDB header:structural protein
Chain: D: PDB Molecule:collagen model peptide (pro-pro-gly)9;
PDBTitle: collagen model peptide (pro-pro-gly)9
74c2cuoB_
not modelled 10.5 23
PDB header:structural protein
Chain: B: PDB Molecule:collagen model peptide (pro-pro-gly)9;
PDBTitle: collagen model peptide (pro-pro-gly)9
75c2cuoE_
not modelled 10.5 23
PDB header:structural protein
Chain: E: PDB Molecule:collagen model peptide (pro-pro-gly)9;
PDBTitle: collagen model peptide (pro-pro-gly)9
76c2cuoA_
not modelled 10.5 23
PDB header:structural protein
Chain: A: PDB Molecule:collagen model peptide (pro-pro-gly)9;
PDBTitle: collagen model peptide (pro-pro-gly)9
77c3a08F_
not modelled 10.4 29
PDB header:structural protein
Chain: F: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-oog-(ppg)4, monoclinic, twinned crystal
78c5eofB_
not modelled 10.2 6
PDB header:protein binding/transferase
Chain: B: PDB Molecule:optineurin;
PDBTitle: crystal structure of optn ntd and tbk1 ctd complex
79c3cwgA_
not modelled 10.0 13
PDB header:transcription
Chain: A: PDB Molecule:signal transducer and activator of transcription
PDBTitle: unphosphorylated mouse stat3 core fragment
80d6paxa1
not modelled 9.5 15
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Paired domain
81c5ew5C_
not modelled 9.3 11
PDB header:hydrolase
Chain: C: PDB Molecule:colicin-e9;
PDBTitle: crystal structure of colicin e9 in complex with its immunity protein2 im9
82c6g7oA_
not modelled 8.9 12
PDB header:membrane protein
Chain: A: PDB Molecule:alkaline ceramidase 3,soluble cytochrome b562;
PDBTitle: crystal structure of human alkaline ceramidase 3 (acer3) at 2.72 angstrom resolution
83c4hwfB_
not modelled 8.7 16
PDB header:apoptosis
Chain: B: PDB Molecule:bag family molecular chaperone regulator 3;
PDBTitle: crystal structure of atbag3
84c1ny9A_
not modelled 8.7 19
PDB header:transcription
Chain: A: PDB Molecule:transcriptional activator tipa-s;
PDBTitle: antibiotic binding domain of a tipa-class multidrug2 resistance transcriptional regulator
85d1ny9a_
not modelled 8.7 19
Fold:Antibiotic binding domain of TipA-like multidrug resistance regulators
Superfamily:Antibiotic binding domain of TipA-like multidrug resistance regulators
Family:Antibiotic binding domain of TipA-like multidrug resistance regulators
86c1yuzB_
not modelled 8.6 10
PDB header:oxidoreductase
Chain: B: PDB Molecule:nigerythrin;
PDBTitle: partially reduced state of nigerythrin
87c3a08C_
not modelled 8.5 24
PDB header:structural protein
Chain: C: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-oog-(ppg)4, monoclinic, twinned crystal
88c3a1hF_
not modelled 8.3 18
PDB header:structural protein
Chain: F: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure analysis of the collagen-like peptide, (ppg)4-otg-2 (ppg)4
89c3ah9F_
not modelled 8.1 21
PDB header:structural protein
Chain: F: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)9 at 1.1 a resolution
90c6o7ua_
not modelled 8.0 10
PDB header:membrane protein
Chain: A: PDB Molecule:
PDBTitle: saccharomyces cerevisiae v-atpase stv1-vo
91c5xuaB_
not modelled 7.6 7
PDB header:signaling protein
Chain: B: PDB Molecule:methyl-accepting chemotaxis sensory transducer;
PDBTitle: the ligand-free dimer of chemoreceptor mcp2201 ligand binding domain
92c1ei3C_
not modelled 7.4 10
PDB header:blood clotting
Chain: C: PDB Molecule:fibrinogen;
PDBTitle: crystal structure of native chicken fibrinogen
93d2oeqa1
not modelled 7.3 13
Fold:YheA-like
Superfamily:YheA/YmcA-like
Family:YheA-like
94c6cfzC_
not modelled 7.2 17
PDB header:nuclear protein
Chain: C: PDB Molecule:dad2;
PDBTitle: structure of the dash/dam1 complex shows its role at the yeast2 kinetochore-microtubule interface
95c3lnrA_
not modelled 7.2 11
PDB header:signaling protein
Chain: A: PDB Molecule:aerotaxis transducer aer2;
PDBTitle: crystal structure of poly-hamp domains from the p. aeruginosa soluble2 receptor aer2
96c1x1kD_
not modelled 7.1 31
PDB header:structural protein
Chain: D: PDB Molecule:host-guest peptide (pro-pro-gly)4-(pro-allohyp-
PDBTitle: host-guest peptide (pro-pro-gly)4-(pro-allohyp-gly)-(pro-2 pro-gly)4
97c1x1kA_
not modelled 7.1 31
PDB header:structural protein
Chain: A: PDB Molecule:host-guest peptide (pro-pro-gly)4-(pro-allohyp-
PDBTitle: host-guest peptide (pro-pro-gly)4-(pro-allohyp-gly)-(pro-2 pro-gly)4
98c2d3fD_
not modelled 7.1 31
PDB header:structural protein
Chain: D: PDB Molecule:collagen model peptides (pro-pro-gly)4-pro-hyp-
PDBTitle: crystal structures of collagen model peptides (pro-pro-gly)2 4-pro-hyp-gly-(pro-pro-gly)4
99c2d3fE_
not modelled 7.1 31
PDB header:structural protein
Chain: E: PDB Molecule:collagen model peptides (pro-pro-gly)4-pro-hyp-
PDBTitle: crystal structures of collagen model peptides (pro-pro-gly)2 4-pro-hyp-gly-(pro-pro-gly)4

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