Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3886c_(mycP2)_4368696_4370348
DateSat Aug 10 22:05:07 BST 2019
Unique Job IDd6befa665ac6aae0
SequenceMASPLNRPGL ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:57.987 Y:55.306 Z:60.336
Model (left) based on template c4j94A_
Top template information
PDB header:hydrolase
Chain: A: PDB Molecule:membrane-anchored mycosin mycp1;
PDBTitle: crystal structure of mycp1 from the esx-1 type vii secretion system
Confidence and coverage
Confidence:100.0% Coverage: 69%
379 residues ( 69% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c4j94A_
100.0 47
PDB header:hydrolase
Chain: A: PDB Molecule:membrane-anchored mycosin mycp1;
PDBTitle: crystal structure of mycp1 from the esx-1 type vii secretion system
2d1r6va_
100.0 28
Fold:Subtilisin-like
Superfamily:Subtilisin-like
Family:Subtilases
3c4tr2A_
100.0 25
PDB header:hydrolase
Chain: A: PDB Molecule:subtilisin-like 1 serine protease;
PDBTitle: crystal structure of pvsub1
4c4kg7A_
100.0 51
PDB header:hydrolase
Chain: A: PDB Molecule:peptidase s8 and s53, subtilisin, kexin, sedolisin;
PDBTitle: structure of mycp3 protease from the type vii (esx-3) secretion2 system.
5c3vtaB_
100.0 28
PDB header:hydrolase
Chain: B: PDB Molecule:cucumisin;
PDBTitle: crystal structure of cucumisin, a subtilisin-like endoprotease from2 cucumis melo l
6c2oxaA_
100.0 26
PDB header:hydrolase
Chain: A: PDB Molecule:extracellular serine protease;
PDBTitle: crystal structure of serine protease of aeromonas sobria
7c3i74B_
100.0 29
PDB header:hydrolase/hydrolase inhibitor
Chain: B: PDB Molecule:subtilisin-like protease;
PDBTitle: crystal structure of the plant subtilisin-like protease sbt3 in2 complex with a chloromethylketone inhibitor
8c1r64A_
100.0 24
PDB header:hydrolase/hydrolase inhibitor
Chain: A: PDB Molecule:kexin;
PDBTitle: the 2.2 a crystal structure of kex2 protease in complex with ac-arg-2 glu-lys-boroarg peptidyl boronic acid inhibitor
9c5xyrA_
100.0 26
PDB header:lyase
Chain: A: PDB Molecule:chemokine protease c;
PDBTitle: crystal structure of a serine protease from streptococcus species
10c1p8jB_
100.0 21
PDB header:hydrolase/hydrolase inhibitor
Chain: B: PDB Molecule:furin precursor;
PDBTitle: crystal structure of the proprotein convertase furin
11c1xf1A_
100.0 30
PDB header:hydrolase
Chain: A: PDB Molecule:c5a peptidase;
PDBTitle: structure of c5a peptidase- a key virulence factor from2 streptococcus
12c5xxzB_
100.0 27
PDB header:lyase
Chain: B: PDB Molecule:chemokine protease c;
PDBTitle: crystal structure of a serine protease from streptococcus species
13c6mw4A_
100.0 22
PDB header:signaling protein
Chain: A: PDB Molecule:putative germination-specific protease;
PDBTitle: structure of pseudoprotease cspc from clostridioides difficile
14c3qfhE_
100.0 27
PDB header:hydrolase
Chain: E: PDB Molecule:epidermin leader peptide processing serine protease epip;
PDBTitle: 2.05 angstrom resolution crystal structure of epidermin leader peptide2 processing serine protease (epip) from staphylococcus aureus.
15c3t41B_
100.0 25
PDB header:hydrolase
Chain: B: PDB Molecule:epidermin leader peptide processing serine protease epip;
PDBTitle: 1.95 angstrom resolution crystal structure of epidermin leader peptide2 processing serine protease (epip) s393a mutant from staphylococcus3 aureus
16c4mzdA_
100.0 26
PDB header:hydrolase
Chain: A: PDB Molecule:nisin leader peptide-processing serine protease nisp;
PDBTitle: high resolution crystal structure of the nisin leader peptidase nisp2 from lactococcus lactis
17c3bpsA_
100.0 26
PDB header:hydrolase/lipid transport
Chain: A: PDB Molecule:proprotein convertase subtilisin/kexin type 9;
PDBTitle: pcsk9:egf-a complex
18d1p8ja2
100.0 21
Fold:Subtilisin-like
Superfamily:Subtilisin-like
Family:Subtilases
19c5vlpA_
100.0 28
PDB header:hydrolase
Chain: A: PDB Molecule:proprotein convertase subtilisin/kexin type 9;
PDBTitle: pcsk9 complex with ldlr antagonist peptide and fab7g7
20c4lvnA_
100.0 25
PDB header:hydrolase/inhibitor/immune system
Chain: A: PDB Molecule:subtilisin-like serine protease;
PDBTitle: crystal structure of pfsub1-prodomain-nimp.m7 fab complex
21c1wmeA_
not modelled 100.0 25
PDB header:hydrolase
Chain: A: PDB Molecule:protease;
PDBTitle: crystal structure of alkaline serine protease kp-43 from bacillus sp.2 ksm-kp43 (1.50 angstrom, 293 k)
22c4i0wB_
not modelled 100.0 29
PDB header:hydrolase
Chain: B: PDB Molecule:protease cspb;
PDBTitle: structure of the clostridium perfringens cspb protease
23c2iy9A_
not modelled 100.0 28
PDB header:toxin
Chain: A: PDB Molecule:suba;
PDBTitle: crystal structure of the a-subunit of the ab5 toxin from e.2 coli
24d1v6ca_
not modelled 100.0 35
Fold:Subtilisin-like
Superfamily:Subtilisin-like
Family:Subtilases
25d2id4a2
not modelled 100.0 24
Fold:Subtilisin-like
Superfamily:Subtilisin-like
Family:Subtilases
26c4aktB_
not modelled 100.0 21
PDB header:hydrolase/peptide
Chain: B: PDB Molecule:thiazoline oxidase/subtilisin-like protease;
PDBTitle: patg macrocyclase in complex with peptide
27c2pmwB_
not modelled 100.0 26
PDB header:hydrolase
Chain: B: PDB Molecule:proprotein convertase subtilisin/kexin type 9;
PDBTitle: the crystal structure of proprotein convertase subtilisin2 kexin type 9 (pcsk9)
28c3afgA_
not modelled 100.0 27
PDB header:hydrolase
Chain: A: PDB Molecule:subtilisin-like serine protease;
PDBTitle: crystal structure of pron-tk-sp from thermococcus kodakaraensis
29d1bh6a_
not modelled 100.0 36
Fold:Subtilisin-like
Superfamily:Subtilisin-like
Family:Subtilases
30c3whiA_
not modelled 100.0 32
PDB header:hydrolase
Chain: A: PDB Molecule:subtilisin e;
PDBTitle: crystal structure of unautoprocessed form of is1-inserted pro-2 subtilisin e
31d1gcia_
not modelled 100.0 36
Fold:Subtilisin-like
Superfamily:Subtilisin-like
Family:Subtilases
32c4zoqM_
not modelled 100.0 25
PDB header:hydrolase
Chain: M: PDB Molecule:intracellular serine protease;
PDBTitle: crystal structure of a lanthipeptide protease
33d1meea_
not modelled 100.0 35
Fold:Subtilisin-like
Superfamily:Subtilisin-like
Family:Subtilases
34d1to2e_
not modelled 100.0 35
Fold:Subtilisin-like
Superfamily:Subtilisin-like
Family:Subtilases
35d1dbia_
not modelled 100.0 40
Fold:Subtilisin-like
Superfamily:Subtilisin-like
Family:Subtilases
36c5vllA_
not modelled 100.0 24
PDB header:hydrolase
Chain: A: PDB Molecule:proprotein convertase subtilisin/kexin type 9;
PDBTitle: short pcsk9 delta-p' complex with peptide pep3
37c3lxuX_
not modelled 100.0 24
PDB header:hydrolase
Chain: X: PDB Molecule:tripeptidyl-peptidase 2;
PDBTitle: crystal structure of tripeptidyl peptidase 2 (tpp ii)
38d1r0re_
not modelled 100.0 34
Fold:Subtilisin-like
Superfamily:Subtilisin-like
Family:Subtilases
39c3vv3B_
not modelled 100.0 31
PDB header:hydrolase
Chain: B: PDB Molecule:deseasin mcp-01;
PDBTitle: crystal structure of deseasin mcp-01 from pseudoalteromonas sp. sm9913
40c5yl7A_
not modelled 100.0 27
PDB header:hydrolase
Chain: A: PDB Molecule:pseudoalteromonas arctica pamc 21717;
PDBTitle: proteases from pseudoalteromonas arctica pamc 21717 (pro21717)
41d1wmda2
not modelled 100.0 21
Fold:Subtilisin-like
Superfamily:Subtilisin-like
Family:Subtilases
42d1thma_
not modelled 100.0 33
Fold:Subtilisin-like
Superfamily:Subtilisin-like
Family:Subtilases
43d1gnsa_
not modelled 100.0 33
Fold:Subtilisin-like
Superfamily:Subtilisin-like
Family:Subtilases
44c3lpcA_
not modelled 100.0 34
PDB header:hydrolase
Chain: A: PDB Molecule:aprb2;
PDBTitle: crystal structure of a subtilisin-like protease
45c2z2zA_
not modelled 100.0 27
PDB header:hydrolase
Chain: A: PDB Molecule:tk-subtilisin precursor;
PDBTitle: crystal structure of unautoprocessed form of tk-subtilisin soaked by2 10mm cacl2
46c5z6oA_
not modelled 100.0 24
PDB header:hydrolase
Chain: A: PDB Molecule:protease;
PDBTitle: crystal structure of penicillium cyclopium protease
47c2z2yC_
not modelled 100.0 25
PDB header:hydrolase
Chain: C: PDB Molecule:tk-subtilisin;
PDBTitle: crystal structure of autoprocessed form of tk-subtilisin
48d2ixta1
not modelled 100.0 24
Fold:Subtilisin-like
Superfamily:Subtilisin-like
Family:Subtilases
49c3f7oB_
not modelled 100.0 24
PDB header:hydrolase
Chain: B: PDB Molecule:serine protease;
PDBTitle: crystal structure of cuticle-degrading protease from paecilomyces2 lilacinus (pl646)
50c2w2qA_
not modelled 100.0 24
PDB header:hydrolase/receptor
Chain: A: PDB Molecule:proprotein convertase subtilisin/kexin type 9;
PDBTitle: pcsk9-deltac d374h mutant bound to wt egf-a of ldlr
51c4dztA_
not modelled 100.0 25
PDB header:hydrolase/hydrolase inhibitor
Chain: A: PDB Molecule:aqualysin-1;
PDBTitle: aqualysin i: the crystal structure of a serine protease from an2 extreme thermophile, thermus aquaticus yt-1
52c1s2nB_
not modelled 100.0 31
PDB header:hydrolase
Chain: B: PDB Molecule:extracellular subtilisin-like serine proteinase;
PDBTitle: crystal structure of a cold adapted subtilisin-like serine proteinase
53c2b6nA_
not modelled 100.0 29
PDB header:hydrolase
Chain: A: PDB Molecule:proteinase k;
PDBTitle: the 1.8 a crystal structure of a proteinase k like enzyme from a2 psychrotroph serratia species
54d2pwaa1
not modelled 100.0 23
Fold:Subtilisin-like
Superfamily:Subtilisin-like
Family:Subtilases
55c2x8jB_
not modelled 100.0 26
PDB header:hydrolase
Chain: B: PDB Molecule:intracellular subtilisin protease;
PDBTitle: intracellular subtilisin precursor from b. clausii
56c4aksA_
not modelled 100.0 23
PDB header:hydrolase
Chain: A: PDB Molecule:thiazoline oxidase/subtilisin-like protease;
PDBTitle: patg macrocyclase domain
57c4h6wB_
not modelled 100.0 33
PDB header:hydrolase
Chain: B: PDB Molecule:n-terminal cyanobactin protease;
PDBTitle: structure of prenylagaramide maturation protease paga
58d1sioa_
not modelled 100.0 20
Fold:Subtilisin-like
Superfamily:Subtilisin-like
Family:Serine-carboxyl proteinase, SCP
59c6f9mA_
not modelled 100.0 26
PDB header:hydrolase
Chain: A: PDB Molecule:serine protease;
PDBTitle: the lipy/f-motif in an intracellular subtilisin protease is involved2 in inhibition
60d1t1ga_
not modelled 100.0 21
Fold:Subtilisin-like
Superfamily:Subtilisin-like
Family:Serine-carboxyl proteinase, SCP
61d1ga6a_
not modelled 100.0 21
Fold:Subtilisin-like
Superfamily:Subtilisin-like
Family:Serine-carboxyl proteinase, SCP
62c3zxxA_
not modelled 100.0 48
PDB header:hydrolase
Chain: A: PDB Molecule:subtilisin-like protein;
PDBTitle: structure of self-cleaved protease domain of pata
63c3zxyA_
not modelled 100.0 42
PDB header:hydrolase
Chain: A: PDB Molecule:subtilisin-like protein;
PDBTitle: structure of s218a mutant of the protease domain of pata
64c1t1eA_
not modelled 100.0 21
PDB header:hydrolase
Chain: A: PDB Molecule:kumamolisin;
PDBTitle: high resolution crystal structure of the intact pro-2 kumamolisin, a sedolisin type proteinase (previously3 called kumamolysin or kscp)
65c3edyA_
not modelled 99.9 19
PDB header:hydrolase
Chain: A: PDB Molecule:tripeptidyl-peptidase 1;
PDBTitle: crystal structure of the precursor form of human tripeptidyl-peptidase2 1
66c3ee6A_
not modelled 99.9 14
PDB header:hydrolase
Chain: A: PDB Molecule:tripeptidyl-peptidase 1;
PDBTitle: crystal structure analysis of tripeptidyl peptidase -i
67d1k78a2
not modelled 60.5 17
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Paired domain
68d6paxa2
not modelled 50.7 17
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Paired domain
69c3sjrB_
not modelled 38.8 25
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of conserved unkown function protein cv_1783 from2 chromobacterium violaceum atcc 12472
70c2k27A_
not modelled 33.8 13
PDB header:transcription regulator
Chain: A: PDB Molecule:paired box protein pax-8;
PDBTitle: solution structure of human pax8 paired box domain
71d1ni7a_
not modelled 31.0 20
Fold:SufE/NifU
Superfamily:SufE/NifU
Family:SufE-like
72d1mzga_
not modelled 30.8 27
Fold:SufE/NifU
Superfamily:SufE/NifU
Family:SufE-like
73c2pe4A_
not modelled 26.3 40
PDB header:hydrolase
Chain: A: PDB Molecule:hyaluronidase-1;
PDBTitle: structure of human hyaluronidase 1, a hyaluronan hydrolyzing enzyme2 involved in tumor growth and angiogenesis
74c1fcuA_
not modelled 25.7 20
PDB header:hydrolase
Chain: A: PDB Molecule:hyaluronoglucosaminidase;
PDBTitle: crystal structure (trigonal) of bee venom hyaluronidase
75d1fcqa_
not modelled 21.0 20
Fold:TIM beta/alpha-barrel
Superfamily:(Trans)glycosidases
Family:Bee venom hyaluronidase
76c1wloA_
not modelled 19.3 26
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:sufe protein;
PDBTitle: solution structure of the hypothetical protein from thermus2 thermophilus hb8
77c1b74A_
not modelled 18.4 30
PDB header:isomerase
Chain: A: PDB Molecule:glutamate racemase;
PDBTitle: glutamate racemase from aquifex pyrophilus
78c3uhfB_
not modelled 18.2 40
PDB header:isomerase
Chain: B: PDB Molecule:glutamate racemase;
PDBTitle: crystal structure of glutamate racemase from campylobacter jejuni2 subsp. jejuni
79d1pdnc_
not modelled 17.0 3
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Paired domain
80c3iz5Q_
not modelled 14.8 17
PDB header:ribosome
Chain: Q: PDB Molecule:60s ribosomal protein l5 (l18p);
PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
81d1b74a1
not modelled 14.8 30
Fold:ATC-like
Superfamily:Aspartate/glutamate racemase
Family:Aspartate/glutamate racemase
82d2ga1a1
not modelled 13.3 28
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Alr1493-like
83c3cqyA_
not modelled 11.6 38
PDB header:transferase
Chain: A: PDB Molecule:anhydro-n-acetylmuramic acid kinase;
PDBTitle: crystal structure of a functionally unknown protein (so_1313) from2 shewanella oneidensis mr-1
84c2m20B_
not modelled 10.5 20
PDB header:signaling protein
Chain: B: PDB Molecule:epidermal growth factor receptor;
PDBTitle: egfr transmembrane - juxtamembrane (tm-jm) segment in bicelles: md2 guided nmr refined structure.
85c4yh5B_
not modelled 10.5 38
PDB header:transferase
Chain: B: PDB Molecule:levoglucosan kinase;
PDBTitle: lipomyces starkeyi levoglucosan kinase bound to adp and manganese
86c2jfzB_
not modelled 10.4 40
PDB header:isomerase
Chain: B: PDB Molecule:glutamate racemase;
PDBTitle: crystal structure of helicobacter pylori glutamate racemase2 in complex with d-glutamate and an inhibitor
87c6paxA_
not modelled 9.4 17
PDB header:gene regulation/dna
Chain: A: PDB Molecule:homeobox protein pax-6;
PDBTitle: crystal structure of the human pax-6 paired domain-dna2 complex reveals a general model for pax protein-dna3 interactions
88c2momC_
not modelled 8.5 12
PDB header:membrane protein
Chain: C: PDB Molecule:lysosome-associated membrane glycoprotein 2;
PDBTitle: structural insights of tm domain of lamp-2a in dpc micelles
89c2momB_
not modelled 8.5 12
PDB header:membrane protein
Chain: B: PDB Molecule:lysosome-associated membrane glycoprotein 2;
PDBTitle: structural insights of tm domain of lamp-2a in dpc micelles
90c3qbwA_
not modelled 7.1 38
PDB header:transferase
Chain: A: PDB Molecule:anhydro-n-acetylmuramic acid kinase;
PDBTitle: crystal structure of pseudomonas aeruginosa 1,6-anhydro-n-2 actetylmuramic acid kinase (anmk) bound to adenosine diphosphate
91c2dhyA_
not modelled 6.7 11
PDB header:immune system
Chain: A: PDB Molecule:cue domain-containing protein 1;
PDBTitle: solution structure of the cue domain in the human cue2 domain containing protein 1 (cuedc1)
92d1s6la1
not modelled 6.6 27
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MerB N-terminal domain-like
93d1kxpd3
not modelled 6.3 21
Fold:Serum albumin-like
Superfamily:Serum albumin-like
Family:Serum albumin-like
94d1wgla_
not modelled 6.1 10
Fold:RuvA C-terminal domain-like
Superfamily:UBA-like
Family:CUE domain
95c6h3aB_
not modelled 5.7 14
PDB header:ligase
Chain: B: PDB Molecule:swi/snf-related matrix-associated actin-dependent regulator
PDBTitle: crystal structure of the kap1 rbcc domain in complex with the smarcad12 cue1 domain.
96c5a49I_
not modelled 5.4 26
PDB header:protein binding
Chain: I: PDB Molecule:maternal effect protein oskar;
PDBTitle: crystal structure of the lotus domain (aa 139-222) of2 drosophila oskar in c222

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Transmembrane helix prediction 

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