Phyre 2 Results for RVBD3893c_(PE36)_4375940

Email	mdejesus@rockefeller.edu
Description	RVBD3893c_(PE36)_4375940_4376173
Date	Sat Aug 10 22:05:08 BST 2019
Unique Job ID	07000448301204e8
Sequence	MVWSVQPEAV ... Download FASTA
Job Type	normal
Job Expiry

Summary

Top model

Image coloured by rainbow N → C terminus

Model dimensions (Å):

X:41.607 Y:32.649 Z:50.191

Model (left) based on template c5xfsA_

Top template information

PDB header:protein transport
Chain: A: PDB Molecule:pe family protein pe8;
PDBTitle: crystal structure of pe8-ppe15 in complex with espg5 from m.2 tuberculosis

Confidence and coverage

Confidence:

86.8%

Coverage:

90%

69 residues ( 90% of your sequence) have been modelled with 86.8% confidence by the single highest scoring template.

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3D viewing

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Sequence analysis

Download FASTA version

Secondary structure and disorder prediction [Show]

Domain analysis [Show]

Rank Aligned region

PDB 5xfs chain A

3D model

Region: 7 - 75
Aligned: 69
Modelled: 69
Confidence: 86.8%
Identity: 33%
PDB header:protein transport
Chain: A: PDB Molecule:pe family protein pe8;
PDBTitle: crystal structure of pe8-ppe15 in complex with espg5 from m.2 tuberculosis

Phyre2

PDB 2g38 chain A domain 1

3D model

Region: 7 - 75
Aligned: 69
Modelled: 69
Confidence: 85.2%
Identity: 23%
Fold: Ferritin-like
Superfamily: PE/PPE dimer-like
Family: PE

Phyre2

PDB 2g38 chain A

Region: 7 - 75
Aligned: 69
Modelled: 69
Confidence: 85.2%
Identity: 23%
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:pe family protein;
PDBTitle: a pe/ppe protein complex from mycobacterium tuberculosis

Phyre2

PDB 5kin chain C

3D model

Region: 41 - 77
Aligned: 37
Modelled: 37
Confidence: 13.3%
Identity: 41%
PDB header:lyase
Chain: C: PDB Molecule:tryptophan synthase alpha chain;
PDBTitle: crystal structure of tryptophan synthase alpha beta complex from2 streptococcus pneumoniae

Phyre2

PDB 1ir1 chain S

3D model

Region: 39 - 63
Aligned: 25
Modelled: 25
Confidence: 9.7%
Identity: 32%
Fold: RuBisCO, small subunit
Superfamily: RuBisCO, small subunit
Family: RuBisCO, small subunit

Phyre2

PDB 2yka chain B

Region: 57 - 72
Aligned: 16
Modelled: 16
Confidence: 9.0%
Identity: 44%
PDB header:rna binding protein/transcription
Chain: B: PDB Molecule:52 kda immediate-early phosphoprotein;
PDBTitle: rrm domain of mrna export adaptor ref2-i bound to hvs orf572 peptide

Phyre2

PDB 1vw4 chain S

3D model

Region: 70 - 77
Aligned: 8
Modelled: 8
Confidence: 6.6%
Identity: 50%
PDB header:ribosome
Chain: S: PDB Molecule:54s ribosomal protein l24, mitochondrial;
PDBTitle: structure of the yeast mitochondrial large ribosomal subunit

Phyre2

PDB 4etr chain A

3D model

Region: 41 - 54
Aligned: 14
Modelled: 14
Confidence: 5.6%
Identity: 29%
PDB header:unknown function
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: x-ray structure of pa2169 from pseudomonas aeruginosa

Phyre2

1
c5xfsA_

2
d2g38a1

3
c2g38A_

4
c5kinC_

5
d1ir1s_

6
c2ykaB_

7
c1vw4S_

8
c4etrA_