Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3896c_(-)_4382121_4383029
DateSat Aug 10 22:05:08 BST 2019
Unique Job IDc5c29b0d4049516a
SequenceVSTWHRIGTE ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:29.794 Y:32.473 Z:31.129
Model (left) based on template c4cfoB_
Top template information
PDB header:hydrolase
Chain: B: PDB Molecule:mltc;
PDBTitle: structure of lytic transglycosylase mltc from escherichia2 coli in complex with tetrasaccharide at 2.9 a resolution.
Confidence and coverage
Confidence: 99.2% Coverage: 20%
59 residues ( 20% of your sequence) have been modelled with 99.2% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
112 residues ( 37%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
Warning: 56% of your sequence is predicted disordered. Disordered regions cannot be meaningfully predicted.
3D viewing
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Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c4cfoB_



99.2 19
PDB header:hydrolase
Chain: B: PDB Molecule:mltc;
PDBTitle: structure of lytic transglycosylase mltc from escherichia2 coli in complex with tetrasaccharide at 2.9 a resolution.
2c2y8pA_



99.1 18
PDB header:lyase
Chain: A: PDB Molecule:endo-type membrane-bound lytic murein transglycosylase a;
PDBTitle: crystal structure of an outer membrane-anchored endolytic2 peptidoglycan lytic transglycosylase (mlte) from3 escherichia coli
3c3w6dB_



99.1 18
PDB header:hydrolase
Chain: B: PDB Molecule:lysozyme-like chitinolytic enzyme;
PDBTitle: crystal structure of catalytic domain of chitinase from ralstonia sp.2 a-471 (e141q) in complex with tetrasaccharide
4c4oz9A_



99.1 21
PDB header:lyase
Chain: A: PDB Molecule:membrane-bound lytic murein transglycosylase f;
PDBTitle: crystal structure of mltf from pseudomonas aeruginosa complexed with2 isoleucine
5d1qsaa2



99.0 16
Fold:Lysozyme-like
Superfamily:Lysozyme-like
Family:Bacterial muramidase, catalytic domain
6c1slyA_



99.0 19
PDB header:glycosyltransferase
Chain: A: PDB Molecule:70-kda soluble lytic transglycosylase;
PDBTitle: complex of the 70-kda soluble lytic transglycosylase with2 bulgecin a
7c6cfcA_



99.0 20
PDB header:hydrolase
Chain: A: PDB Molecule:lytic transglycosylase;
PDBTitle: crystal structure of soluble lytic transglycosylase cj0843 of2 campylobacter jejuni in complex with bulgecin a
8d1gbsa_



99.0 14
Fold:Lysozyme-like
Superfamily:Lysozyme-like
Family:G-type lysozyme
9c3mgwA_



98.9 14
PDB header:hydrolase
Chain: A: PDB Molecule:lysozyme g;
PDBTitle: thermodynamics and structure of a salmon cold-active goose-type2 lysozyme
10c6fcqA_



98.9 17
PDB header:lyase
Chain: A: PDB Molecule:soluble lytic murein transglycosylase;
PDBTitle: the x-ray structure of lytic transglycosylase slt inactive mutant2 e503q from pseudomonas aeruginosa in complex with bulgecin a
11c4xp8A_



98.9 13
PDB header:hydrolase
Chain: A: PDB Molecule:etga protein;
PDBTitle: structure of etga d60n mutant
12c3gxkB_



98.9 12
PDB header:hydrolase
Chain: B: PDB Molecule:goose-type lysozyme 1;
PDBTitle: the crystal structure of g-type lysozyme from atlantic cod (gadus2 morhua l.) in complex with nag oligomers sheds new light on substrate3 binding and the catalytic mechanism. native structure to 1.9
13c1xsfA_



98.5 17
PDB header:cell cycle, hydrolase
Chain: A: PDB Molecule:probable resuscitation-promoting factor rpfb;
PDBTitle: solution structure of a resuscitation promoting factor2 domain from mycobacterium tuberculosis
14d1xsfa1



98.3 21
Fold:Lysozyme-like
Superfamily:Lysozyme-like
Family:RPF-like
15c4ow1A_



98.3 27
PDB header:hydrolase
Chain: A: PDB Molecule:resuscitation-promoting factor rpfc;
PDBTitle: crystal structure of resuscitation promoting factor c
16c4hpeA_



98.0 13
PDB header:hydrolase
Chain: A: PDB Molecule:putative cell wall hydrolase tn916-like,ctn1-orf17;
PDBTitle: crystal structure of a putative cell wall hydrolase (cd630_03720) from2 clostridium difficile 630 at 2.38 a resolution
17c3eo5A_



97.8 21
PDB header:cell adhesion
Chain: A: PDB Molecule:resuscitation-promoting factor rpfb;
PDBTitle: crystal structure of the resuscitation promoting factor rpfb
18c4fdyA_



97.7 14
PDB header:hydrolase
Chain: A: PDB Molecule:similar to lipoprotein, nlp/p60 family;
PDBTitle: crystal structure of a similar to lipoprotein, nlp/p60 family2 (sav0400) from staphylococcus aureus subsp. aureus mu50 at 2.23 a3 resolution
19c5e27B_



97.6 23
PDB header:cell adhesion
Chain: B: PDB Molecule:resuscitation-promoting factor rpfb;
PDBTitle: the structure of resuscitation promoting factor b from m. tuberculosis2 reveals unexpected ubiquitin-like domains
20c3bkhA_



97.5 23
PDB header:hydrolase
Chain: A: PDB Molecule:lytic transglycosylase;
PDBTitle: crystal structure of the bacteriophage phikz lytic2 transglycosylase, gp144
21c2fbdB_



not modelled 96.9 18
PDB header:hydrolase
Chain: B: PDB Molecule:lysozyme 1;
PDBTitle: the crystallographic structure of the digestive lysozyme 1 from musca2 domestica at 1.90 ang.
22d1iiza_



not modelled 96.9 16
Fold:Lysozyme-like
Superfamily:Lysozyme-like
Family:C-type lysozyme
23c3ct5A_



not modelled 96.7 10
PDB header:hydrolase
Chain: A: PDB Molecule:morphogenesis protein 1;
PDBTitle: crystal and cryoem structural studies of a cell wall degrading enzyme2 in the bacteriophage phi29 tail
24d1lsga1



not modelled 96.7 20
Fold:Lysozyme-like
Superfamily:Lysozyme-like
Family:C-type lysozyme
25d1gd6a_



not modelled 96.6 15
Fold:Lysozyme-like
Superfamily:Lysozyme-like
Family:C-type lysozyme
26d1juga_



not modelled 96.5 16
Fold:Lysozyme-like
Superfamily:Lysozyme-like
Family:C-type lysozyme
27d1ghla_



not modelled 96.4 22
Fold:Lysozyme-like
Superfamily:Lysozyme-like
Family:C-type lysozyme
28d1hhla_



not modelled 96.2 22
Fold:Lysozyme-like
Superfamily:Lysozyme-like
Family:C-type lysozyme
29d2nwdx1



not modelled 96.2 19
Fold:Lysozyme-like
Superfamily:Lysozyme-like
Family:C-type lysozyme
30d2vb1a1



not modelled 96.2 20
Fold:Lysozyme-like
Superfamily:Lysozyme-like
Family:C-type lysozyme
31d1jsea_



not modelled 96.2 20
Fold:Lysozyme-like
Superfamily:Lysozyme-like
Family:C-type lysozyme
32d1qqya_



not modelled 96.1 20
Fold:Lysozyme-like
Superfamily:Lysozyme-like
Family:C-type lysozyme
33d2eqla_



not modelled 96.0 24
Fold:Lysozyme-like
Superfamily:Lysozyme-like
Family:C-type lysozyme
34d1lmqa_



not modelled 96.0 16
Fold:Lysozyme-like
Superfamily:Lysozyme-like
Family:C-type lysozyme
35d1qusa_



not modelled 95.7 26
Fold:Lysozyme-like
Superfamily:Lysozyme-like
Family:Bacterial muramidase, catalytic domain
36c2z2fA_



not modelled 95.7 15
PDB header:hydrolase
Chain: A: PDB Molecule:lysozyme c-2;
PDBTitle: x-ray crystal structure of bovine stomach lysozyme
37d1yroa1



not modelled 95.5 17
Fold:Lysozyme-like
Superfamily:Lysozyme-like
Family:C-type lysozyme
38d1b9oa_



not modelled 95.4 17
Fold:Lysozyme-like
Superfamily:Lysozyme-like
Family:C-type lysozyme
39d1fkqa_



not modelled 95.3 20
Fold:Lysozyme-like
Superfamily:Lysozyme-like
Family:C-type lysozyme
40d1hfxa_



not modelled 95.0 19
Fold:Lysozyme-like
Superfamily:Lysozyme-like
Family:C-type lysozyme
41d1ivma_



not modelled 94.9 19
Fold:Lysozyme-like
Superfamily:Lysozyme-like
Family:C-type lysozyme
42c2goiC_



not modelled 94.8 24
PDB header:cell adhesion, sugar binding protein
Chain: C: PDB Molecule:sperm lysozyme-like protein 1;
PDBTitle: crystal structure of mouse sperm c-type lysozyme-like protein 1
43d1f6sa_



not modelled 94.8 15
Fold:Lysozyme-like
Superfamily:Lysozyme-like
Family:C-type lysozyme
44d1alca_



not modelled 94.6 17
Fold:Lysozyme-like
Superfamily:Lysozyme-like
Family:C-type lysozyme
45c5anzA_



not modelled 94.6 20
PDB header:hydrolase
Chain: A: PDB Molecule:soluble lytic transglycosylase b3;
PDBTitle: crystal structure of sltb3 from pseudomonas aeruginosa.
46c4anrA_



not modelled 93.7 23
PDB header:lyase
Chain: A: PDB Molecule:soluble lytic transglycosylase b;
PDBTitle: crystal structure of soluble lytic transglycosylase sltb12 from pseudomonas aeruginosa
47c3csqC_



not modelled 92.9 13
PDB header:hydrolase
Chain: C: PDB Molecule:morphogenesis protein 1;
PDBTitle: crystal and cryoem structural studies of a cell wall2 degrading enzyme in the bacteriophage phi29 tail
48d1hbna1



not modelled 39.6 26
Fold:Methyl-coenzyme M reductase alpha and beta chain C-terminal domain
Superfamily:Methyl-coenzyme M reductase alpha and beta chain C-terminal domain
Family:Methyl-coenzyme M reductase alpha and beta chain C-terminal domain
49c5n1qD_



not modelled 23.3 19
PDB header:transferase
Chain: D: PDB Molecule:methyl-coenzyme m reductase iii from methanothermococcus
PDBTitle: methyl-coenzyme m reductase iii from methanothermococcus2 thermolithotrophicus at 1.9 a resolution
50c1hbuD_



not modelled 22.5 23
PDB header:methanogenesis
Chain: D: PDB Molecule:methyl-coenzyme m reductase i alpha subunit;
PDBTitle: methyl-coenzyme m reductase in the mcr-red1-silent state in complex2 with coenzyme m
51d1e6va1



not modelled 14.9 23
Fold:Methyl-coenzyme M reductase alpha and beta chain C-terminal domain
Superfamily:Methyl-coenzyme M reductase alpha and beta chain C-terminal domain
Family:Methyl-coenzyme M reductase alpha and beta chain C-terminal domain
52c6cgvW_



not modelled 12.2 44
PDB header:virus
Chain: W: PDB Molecule:pre-protein vi;
PDBTitle: revised crystal structure of human adenovirus
53c5l2dA_



not modelled 8.8 29
PDB header:cell adhesion
Chain: A: PDB Molecule:surface-associated protein csha;
PDBTitle: streptococcal surface adhesin - csha nr2
54d1e4ra_



not modelled 8.3 46
Fold:Defensin-like
Superfamily:Defensin-like
Family:Defensin
55c4upuB_



not modelled 6.6 31
PDB header:transferase
Chain: B: PDB Molecule:inositol-trisphosphate 3-kinase a;
PDBTitle: crystal structure of ip3 3-k calmodulin binding region in complex2 with calmodulin
56c4gaxA_



not modelled 6.5 13
PDB header:lyase
Chain: A: PDB Molecule:amorpha-4,11-diene synthase;
PDBTitle: crystal structure of an alpha-bisabolol synthase mutant
57d1e6ya1



not modelled 5.7 19
Fold:Methyl-coenzyme M reductase alpha and beta chain C-terminal domain
Superfamily:Methyl-coenzyme M reductase alpha and beta chain C-terminal domain
Family:Methyl-coenzyme M reductase alpha and beta chain C-terminal domain
58c5nm7A_



not modelled 5.3 21
PDB header:hydrolase
Chain: A: PDB Molecule:peptidoglycan-binding domain 1;
PDBTitle: crystal structure of burkholderia ap3 phage endolysin

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