Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3899c_(-)_4384325_4385557
DateSat Aug 10 22:05:08 BST 2019
Unique Job IDdc6e9a80ccc5eec3
SequenceMVTGQPAAAG ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:40.481 Y:49.654 Z:61.814
Model (left) based on template c5imuA_
Top template information
PDB header:signaling protein
Chain: A: PDB Molecule:tat (twin-arginine translocation) pathway signal sequence
PDBTitle: a fragment of conserved hypothetical protein rv3899c (residues 184-2 410) from mycobacterium tuberculosis
Confidence and coverage
Confidence:100.0% Coverage: 53%
217 residues ( 53% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
Warning: 76% of your sequence is predicted disordered. Disordered regions cannot be meaningfully predicted.
3D viewing
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5imuA_
100.0 100
PDB header:signaling protein
Chain: A: PDB Molecule:tat (twin-arginine translocation) pathway signal sequence
PDBTitle: a fragment of conserved hypothetical protein rv3899c (residues 184-2 410) from mycobacterium tuberculosis
2c6r24D_
74.1 6
PDB header:virus like particle
Chain: D: PDB Molecule:transposon ty3-i gag-pol polyprotein;
PDBTitle: the structure of a ty3 retrotransposon icosahedral capsid
3c1wyoA_
55.2 14
PDB header:structural protein
Chain: A: PDB Molecule:microtubule-associated protein rp/eb family
PDBTitle: solution structure of the ch domain of human microtubule-2 associated protein rp/eb family member 3
4c1q0wA_
48.5 25
PDB header:transport protein
Chain: A: PDB Molecule:vacuolar protein sorting-associated protein
PDBTitle: solution structure of vps27 amino-terminal uim-ubiquitin2 complex
5d1q1va_
46.3 23
Fold:Another 3-helical bundle
Superfamily:DEK C-terminal domain
Family:DEK C-terminal domain
6c4dx8H_
27.5 18
PDB header:protein binding
Chain: H: PDB Molecule:krev interaction trapped protein 1;
PDBTitle: icap1 in complex with krit1 n-terminus
7d1wh4a_
23.6 19
Fold:DEATH domain
Superfamily:DEATH domain
Family:DEATH domain, DD
8c2konA_
21.9 16
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: nmr solution structure of cv_2116 from chromobacterium2 violaceum. northeast structural genomics consortium target3 cvt4(1-82)
9d1v5ka_
20.5 18
Fold:CH domain-like
Superfamily:Calponin-homology domain, CH-domain
Family:Calponin-homology domain, CH-domain
10c5aj3h_
20.3 25
PDB header:ribosome
Chain: H: PDB Molecule:
PDBTitle: structure of the small subunit of the mammalian mitoribosome
11c1itkB_
17.8 24
PDB header:oxidoreductase
Chain: B: PDB Molecule:catalase-peroxidase;
PDBTitle: crystal structure of catalase-peroxidase from haloarcula2 marismortui
12c5l82A_
17.3 40
PDB header:antibiotic
Chain: A: PDB Molecule:enterococcin k1;
PDBTitle: nmr structure of enterocin k1 in 50%/50% tfe/water
13c3rx6A_
16.3 15
PDB header:transcription regulator
Chain: A: PDB Molecule:polarity suppression protein;
PDBTitle: crystal structure of polarity suppression protein from enterobacteria2 phage p4
14d2qjza1
16.2 14
Fold:CH domain-like
Superfamily:Calponin-homology domain, CH-domain
Family:Calponin-homology domain, CH-domain
15c2kneB_
16.2 22
PDB header:metal transport
Chain: B: PDB Molecule:atpase, ca++ transporting, plasma membrane 4;
PDBTitle: calmodulin wraps around its binding domain in the plasma2 membrane ca2+ pump anchored by a novel 18-1 motif
16d2pofa1
15.1 17
Fold:HIT-like
Superfamily:HIT-like
Family:CDH-like
17d1joga_
14.6 27
Fold:Four-helical up-and-down bundle
Superfamily:Nucleotidyltransferase substrate binding subunit/domain
Family:Family 1 bi-partite nucleotidyltransferase subunit
18c3vlmB_
13.7 24
PDB header:oxidoreductase
Chain: B: PDB Molecule:catalase-peroxidase 2;
PDBTitle: crystal structure analysis of the met244ala variant of katg from2 haloarcula marismortui
19c5f5uB_
13.0 25
PDB header:splicing
Chain: B: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of the snu23-prp38-mfap1(217-258) complex of2 chaetomium thermophilum
20d1l2la_
11.9 14
Fold:Ribokinase-like
Superfamily:Ribokinase-like
Family:ADP-specific Phosphofructokinase/Glucokinase
21d1prtf_
not modelled 11.9 20
Fold:OB-fold
Superfamily:Bacterial enterotoxins
Family:Bacterial AB5 toxins, B-subunits
22c2p0tA_
not modelled 11.7 12
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:upf0307 protein pspto_4464;
PDBTitle: structural genomics, the crystal structure of a conserved putative2 protein from pseudomonas syringae pv. tomato str. dc3000
23d2p0ta1
not modelled 11.7 12
Fold:PSPTO4464-like
Superfamily:PSPTO4464-like
Family:PSPTO4464-like
24c6gseA_
not modelled 11.7 5
PDB header:protein binding
Chain: A: PDB Molecule:activity-regulated cytoskeleton-associated protein;
PDBTitle: solution structure of the capsid domain from the activity-regulated2 cytoskeleton-associated protein, arc
25d1wtya_
not modelled 11.6 19
Fold:Four-helical up-and-down bundle
Superfamily:Nucleotidyltransferase substrate binding subunit/domain
Family:Family 1 bi-partite nucleotidyltransferase subunit
26c6od7D_
not modelled 10.8 17
PDB header:viral protein
Chain: D: PDB Molecule:portal protein;
PDBTitle: herpes simplex virus type 1 (hsv-1) pul6 portal protein, dodecameric2 complex
27c2rqpA_
not modelled 10.8 24
PDB header:gene regulation
Chain: A: PDB Molecule:heterochromatin protein 1-binding protein 3;
PDBTitle: the solution structure of heterochromatin protein 1-binding2 protein 74 histone h1 like domain
28c5f5uH_
not modelled 10.5 25
PDB header:splicing
Chain: H: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of the snu23-prp38-mfap1(217-258) complex of2 chaetomium thermophilum
29c4hl7A_
not modelled 10.0 18
PDB header:transferase
Chain: A: PDB Molecule:nicotinate phosphoribosyltransferase;
PDBTitle: crystal structure of nicotinate phosphoribosyltransferase (target2 nysgr-026035) from vibrio cholerae
30d1w0ba_
not modelled 10.0 47
Fold:Spectrin repeat-like
Superfamily:Alpha-hemoglobin stabilizing protein AHSP
Family:Alpha-hemoglobin stabilizing protein AHSP
31d1vcva1
not modelled 9.9 21
Fold:TIM beta/alpha-barrel
Superfamily:Aldolase
Family:Class I aldolase
32d1mp1a_
not modelled 9.5 21
Fold:PWI domain
Superfamily:PWI domain
Family:PWI domain
33d1yl7a1
not modelled 9.1 12
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
34c5ed9A_
not modelled 8.5 33
PDB header:transport protein
Chain: A: PDB Molecule:sun domain-containing protein 2;
PDBTitle: crystal structure of cc1 of mouse sun2
35c3ut2B_
not modelled 8.4 20
PDB header:oxidoreductase
Chain: B: PDB Molecule:catalase-peroxidase 2;
PDBTitle: crystal structure of fungal magkatg2
36d1b8xa1
not modelled 7.8 18
Fold:GST C-terminal domain-like
Superfamily:GST C-terminal domain-like
Family:Glutathione S-transferase (GST), C-terminal domain
37d1z8ua1
not modelled 7.8 47
Fold:Spectrin repeat-like
Superfamily:Alpha-hemoglobin stabilizing protein AHSP
Family:Alpha-hemoglobin stabilizing protein AHSP
38d1usta_
not modelled 7.6 14
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Linker histone H1/H5
39d1ybea1
not modelled 7.4 14
Fold:TIM beta/alpha-barrel
Superfamily:Nicotinate/Quinolinate PRTase C-terminal domain-like
Family:Monomeric nicotinate phosphoribosyltransferase C-terminal domain
40d1yqaa1
not modelled 7.4 14
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Linker histone H1/H5
41d2qeec1
not modelled 7.1 22
Fold:TIM beta/alpha-barrel
Superfamily:Metallo-dependent hydrolases
Family:Uronate isomerase-like
42d2ccaa1
not modelled 6.8 15
Fold:Heme-dependent peroxidases
Superfamily:Heme-dependent peroxidases
Family:Catalase-peroxidase KatG
43c5ldwg_
not modelled 6.5 24
PDB header:oxidoreductase
Chain: G: PDB Molecule:nadh-ubiquinone oxidoreductase 75 kda subunit,
PDBTitle: structure of mammalian respiratory complex i, class1
44d1duga1
not modelled 6.4 16
Fold:GST C-terminal domain-like
Superfamily:GST C-terminal domain-like
Family:Glutathione S-transferase (GST), C-terminal domain
45c6dg6F_
not modelled 6.3 27
PDB header:biosynthetic protein
Chain: F: PDB Molecule:neoleukin-2/15;
PDBTitle: structure of a de novo designed interleukin-2/interleukin-15 mimetic
46c1cffB_
not modelled 6.0 29
PDB header:calmodulin
Chain: B: PDB Molecule:calcium pump;
PDBTitle: nmr solution structure of a complex of calmodulin with a binding2 peptide of the ca2+-pump
47c5f5tD_
not modelled 5.9 25
PDB header:splicing
Chain: D: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of the prp38-mfap1 complex of chaetomium2 thermophilum
48c2bbzC_
not modelled 5.9 16
PDB header:viral protein
Chain: C: PDB Molecule:viral casp8 and fadd-like apoptosis regulator;
PDBTitle: crystal structure of mc159 reveals molecular mechanism of2 disc assembly and vflip inhibition
49c5dggB_
not modelled 5.8 18
PDB header:unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: central domain of uncharacterized lpg1148 protein from legionella2 pneumophila
50c2qjxA_
not modelled 5.6 10
PDB header:protein binding
Chain: A: PDB Molecule:protein bim1;
PDBTitle: structural basis of microtubule plus end tracking by xmap215, clip-1702 and eb1
51d2o8ra3
not modelled 5.6 16
Fold:Phospholipase D/nuclease
Superfamily:Phospholipase D/nuclease
Family:Polyphosphate kinase C-terminal domain
52d1jfla2
not modelled 5.4 19
Fold:ATC-like
Superfamily:Aspartate/glutamate racemase
Family:Aspartate/glutamate racemase
53c2kscA_
not modelled 5.4 13
PDB header:unknown function
Chain: A: PDB Molecule:cyanoglobin;
PDBTitle: solution structure of synechococcus sp. pcc 7002 hemoglobin
54c6fzoC_
not modelled 5.4 14
PDB header:fluorescent protein
Chain: C: PDB Molecule:smurfp;
PDBTitle: smurfp-y56f mutant
55c6fhgB_
not modelled 5.1 18
PDB header:antimicrobial protein
Chain: B: PDB Molecule:lyst endolysin;
PDBTitle: crystal structure of the ts2631 endolysin from thermus scotoductus2 phage with the unique n-terminal moiety responsible for peptidoglycan3 anchoring
56c2mniA_
not modelled 5.1 27
PDB header:unknown function
Chain: A: PDB Molecule:hp_q4d059;
PDBTitle: chemical shift assignments and structure of q4d059, a hypothetical2 protein from trypanosoma cruzi
57c5lcwS_
not modelled 5.0 15
PDB header:cell cycle
Chain: S: PDB Molecule:mitotic checkpoint serine/threonine-protein kinase bub1
PDBTitle: cryo-em structure of the anaphase-promoting complex/cyclosome, in2 complex with the mitotic checkpoint complex (apc/c-mcc) at 4.23 angstrom resolution

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