Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3901c_(-)_4386543_4386992
DateSat Aug 10 22:05:08 BST 2019
Unique Job ID037eeb24bb6990f4
SequenceVQAANRRSAD ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:29.437 Y:16.193 Z:14.070
Model (left) based on template d1rhga_
Top template information
Fold:4-helical cytokines
Superfamily:4-helical cytokines
Family:Long-chain cytokines
Confidence and coverage
Confidence: 14.8% Coverage: 13%
19 residues ( 13% of your sequence) have been modelled with 14.8% confidence by the single highest scoring template.
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3D viewing
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1rhga_



14.8 47
Fold:4-helical cytokines
Superfamily:4-helical cytokines
Family:Long-chain cytokines
2d1r44a_



12.9 80
Fold:Hedgehog/DD-peptidase
Superfamily:Hedgehog/DD-peptidase
Family:VanX-like
3d1kyqa2



11.8 21
Fold:Siroheme synthase middle domains-like
Superfamily:Siroheme synthase middle domains-like
Family:Siroheme synthase middle domains-like
4d2fd5a2



11.6 17
Fold:Tetracyclin repressor-like, C-terminal domain
Superfamily:Tetracyclin repressor-like, C-terminal domain
Family:Tetracyclin repressor-like, C-terminal domain
5c4lhfA_



11.2 40
PDB header:viral protein
Chain: A: PDB Molecule:regulatory protein cox;
PDBTitle: crystal structure of a dna binding protein from phage p2
6d1msza_



9.5 10
Fold:IF3-like
Superfamily:R3H domain
Family:R3H domain
7c1mszA_



9.5 10
PDB header:dna binding protein
Chain: A: PDB Molecule:dna-binding protein smubp-2;
PDBTitle: solution structure of the r3h domain from human smubp-2
8c6cfwD_



9.3 36
PDB header:membrane protein
Chain: D: PDB Molecule:mbh subunit;
PDBTitle: cryoem structure of a respiratory membrane-bound hydrogenase
9c2v0xB_



9.1 25
PDB header:cell cycle
Chain: B: PDB Molecule:lamina-associated polypeptide 2 isoforms alpha/zeta;
PDBTitle: the dimerization domain of lap2alpha
10c1kyqC_



8.5 21
PDB header:oxidoreductase, lyase
Chain: C: PDB Molecule:siroheme biosynthesis protein met8;
PDBTitle: met8p: a bifunctional nad-dependent dehydrogenase and2 ferrochelatase involved in siroheme synthesis.
11d1bgca_



8.4 37
Fold:4-helical cytokines
Superfamily:4-helical cytokines
Family:Long-chain cytokines
12d1v2za_



8.4 43
Fold:KaiA/RbsU domain
Superfamily:KaiA/RbsU domain
Family:Circadian clock protein KaiA, C-terminal domain
13d1r8ja1



8.2 43
Fold:KaiA/RbsU domain
Superfamily:KaiA/RbsU domain
Family:Circadian clock protein KaiA, C-terminal domain
14d1r5qa_



8.2 43
Fold:KaiA/RbsU domain
Superfamily:KaiA/RbsU domain
Family:Circadian clock protein KaiA, C-terminal domain
15d1sv1a_



8.1 43
Fold:KaiA/RbsU domain
Superfamily:KaiA/RbsU domain
Family:Circadian clock protein KaiA, C-terminal domain
16c2lg4A_



8.1 30
PDB header:antimicrobial protein
Chain: A: PDB Molecule:aurelin;
PDBTitle: 3d solution structure of antimicrobial peptide aurelin
17c3dfzB_



7.9 21
PDB header:oxidoreductase
Chain: B: PDB Molecule:precorrin-2 dehydrogenase;
PDBTitle: sirc, precorrin-2 dehydrogenase
18d2hjea1



7.1 16
Fold:Profilin-like
Superfamily:Sensory domain-like
Family:LuxQ-periplasmic domain-like
19d1bgea_



6.5 37
Fold:4-helical cytokines
Superfamily:4-helical cytokines
Family:Long-chain cytokines
20c2hyiJ_



5.9 50
PDB header:hydrolase/rna binding protein/rna
Chain: J: PDB Molecule:protein casc3;
PDBTitle: structure of the human exon junction complex with a trapped2 dead-box helicase bound to rna
21c2kvtA_



not modelled 5.5 41
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein yaia;
PDBTitle: solution nmr structure of yaia from escherichia eoli. northeast2 structural genomics target er244

Binding site prediction 

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below