Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3915_(-)_4403369_4404589
DateSat Aug 10 22:05:10 BST 2019
Unique Job IDb1df0b5eba6a6b9a
SequenceMPSPRREDGD ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:37.030 Y:43.265 Z:53.585
Model (left) based on template c4binA_
Top template information
PDB header:hydrolase
Chain: A: PDB Molecule:n-acetylmuramoyl-l-alanine amidase amic;
PDBTitle: crystal structure of the e. coli n-acetylmuramoyl-l-alanine amidase2 amic
Confidence and coverage
Confidence:100.0% Coverage: 46%
188 residues ( 46% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
363 residues ( 89%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
3D viewing
Interactive 3D view in JSmol
For other options to view your downloaded structure offline see the FAQ

Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c4binA_



100.0 23
PDB header:hydrolase
Chain: A: PDB Molecule:n-acetylmuramoyl-l-alanine amidase amic;
PDBTitle: crystal structure of the e. coli n-acetylmuramoyl-l-alanine amidase2 amic
2c5j72B_



100.0 21
PDB header:hydrolase
Chain: B: PDB Molecule:putative n-acetylmuramoyl-l-alanine amidase,autolysin cwp6;
PDBTitle: cwp6 from clostridium difficile
3d1jwqa_



100.0 23
Fold:Phosphorylase/hydrolase-like
Superfamily:Zn-dependent exopeptidases
Family:N-acetylmuramoyl-L-alanine amidase-like
4c3ne8A_



100.0 24
PDB header:hydrolase
Chain: A: PDB Molecule:n-acetylmuramoyl-l-alanine amidase;
PDBTitle: the crystal structure of a domain from n-acetylmuramoyl-l-alanine2 amidase of bartonella henselae str. houston-1
5c4rn7A_



100.0 24
PDB header:hydrolase
Chain: A: PDB Molecule:n-acetylmuramoyl-l-alanine amidase;
PDBTitle: the crystal structure of n-acetylmuramoyl-l-alanine amidase from2 clostridium difficile 630
6c5emiA_



100.0 26
PDB header:hydrolase
Chain: A: PDB Molecule:cell wall hydrolase/autolysin;
PDBTitle: n-acetylmuramoyl-l-alanine amidase amic2 of nostoc punctiforme
7c4m6iA_



100.0 24
PDB header:hydrolase
Chain: A: PDB Molecule:peptidoglycan amidase rv3717;
PDBTitle: structure of the reduced, zn-bound form of mycobacterium tuberculosis2 peptidoglycan amidase rv3717
8c1xovA_



100.0 17
PDB header:hydrolase
Chain: A: PDB Molecule:ply protein;
PDBTitle: the crystal structure of the listeria monocytogenes bacteriophage psa2 endolysin plypsa
9c3czxA_



100.0 17
PDB header:hydrolase
Chain: A: PDB Molecule:putative n-acetylmuramoyl-l-alanine amidase;
PDBTitle: the crystal structure of the putative n-acetylmuramoyl-l-2 alanine amidase from neisseria meningitidis
10d1xova2



100.0 17
Fold:Phosphorylase/hydrolase-like
Superfamily:Zn-dependent exopeptidases
Family:N-acetylmuramoyl-L-alanine amidase-like
11c3qayC_



100.0 17
PDB header:lyase
Chain: C: PDB Molecule:endolysin;
PDBTitle: catalytic domain of cd27l endolysin targeting clostridia difficile
12c1lbuA_



99.7 24
PDB header:hydrolase
Chain: A: PDB Molecule:muramoyl-pentapeptide carboxypeptidase;
PDBTitle: hydrolase metallo (zn) dd-peptidase
13c3bkhA_



99.7 32
PDB header:hydrolase
Chain: A: PDB Molecule:lytic transglycosylase;
PDBTitle: crystal structure of the bacteriophage phikz lytic2 transglycosylase, gp144
14c5tv7A_



99.7 38
PDB header:hydrolase
Chain: A: PDB Molecule:putative peptidoglycan-binding/hydrolysing protein;
PDBTitle: 2.05 angstrom resolution crystal structure of peptidoglycan-binding2 protein from clostridioides difficile in complex with glutamine3 hydroxamate.
15c5bmqA_



99.7 23
PDB header:hydrolase
Chain: A: PDB Molecule:erfk/ybis/ycfs/ynhg family protein;
PDBTitle: crystal structure of l,d-transpeptidase (yku) from stackebrandtia2 nassauensis
16c4lpqA_



99.7 34
PDB header:transferase
Chain: A: PDB Molecule:erfk/ybis/ycfs/ynhg family protein;
PDBTitle: crystal structure of the l,d-transpeptidase (residues 123-326) from2 xylanimonas cellulosilytica dsm 15894
17d1lbua1



99.6 35
Fold:PGBD-like
Superfamily:PGBD-like
Family:Peptidoglycan binding domain, PGBD
18c5nm7A_



99.6 36
PDB header:hydrolase
Chain: A: PDB Molecule:peptidoglycan-binding domain 1;
PDBTitle: crystal structure of burkholderia ap3 phage endolysin
19c4g54A_



99.6 21
PDB header:peptidoglycan-binding protein
Chain: A: PDB Molecule:general secretion pathway protein;
PDBTitle: crystal structure of a periplasmic domain of the epsab fusion protein2 of the vibrio vulnificus type ii secretion system
20c4xxtA_



99.5 32
PDB header:hydrolase
Chain: A: PDB Molecule:fusion of predicted zn-dependent amidase/peptidase (cell
PDBTitle: crystal structure of fused zn-dependent2 amidase/peptidase/peptodoglycan-binding domain-containing protein3 from clostridium acetobutylicum atcc 824
21c5anzA_



not modelled 99.5 29
PDB header:hydrolase
Chain: A: PDB Molecule:soluble lytic transglycosylase b3;
PDBTitle: crystal structure of sltb3 from pseudomonas aeruginosa.
22c4bolA_



not modelled 99.5 21
PDB header:hydrolase
Chain: A: PDB Molecule:ampdh2;
PDBTitle: crystal structure of ampdh2 from pseudomonas aeruginosa in2 complex with pentapeptide
23c2bh7A_



not modelled 99.2 18
PDB header:hydrolase
Chain: A: PDB Molecule:n-acetylmuramoyl-l-alanine amidase;
PDBTitle: crystal structure of a semet derivative of amid at 2.22 angstroms
24c4bxdB_



not modelled 99.2 19
PDB header:hydrolase/peptide
Chain: B: PDB Molecule:ampdh3;
PDBTitle: crystal structure of ampdh3 from pseudomonas aeruginosa in2 complex with tetrasaccharide pentapeptide
25c6ntwA_



not modelled 99.2 36
PDB header:transferase/transferase inhibitor
Chain: A: PDB Molecule:probable l,d-transpeptidase ycbb;
PDBTitle: crystal structure of e. coli ycbb
26c4c2dC_



not modelled 98.2 25
PDB header:hydrolase/peptide
Chain: C: PDB Molecule:carboxy-terminal processing protease ctpb;
PDBTitle: crystal structure of the protease ctpb in an active state
27c2mzeA_



not modelled 98.0 12
PDB header:hydrolase
Chain: A: PDB Molecule:matrilysin;
PDBTitle: nmr solution structure of the pro form of human matrilysin (prommp-7)
28d1eaka1



not modelled 97.9 15
Fold:PGBD-like
Superfamily:PGBD-like
Family:MMP N-terminal domain
29d2bgxa1



not modelled 97.8 23
Fold:PGBD-like
Superfamily:PGBD-like
Family:Peptidoglycan binding domain, PGBD
30c1slmA_



not modelled 97.8 19
PDB header:hydrolase
Chain: A: PDB Molecule:stromelysin-1;
PDBTitle: crystal structure of fibroblast stromelysin-1: the c-truncated human2 proenzyme
31d1slma1



not modelled 97.7 19
Fold:PGBD-like
Superfamily:PGBD-like
Family:MMP N-terminal domain
32d1l6ja1



not modelled 97.6 22
Fold:PGBD-like
Superfamily:PGBD-like
Family:MMP N-terminal domain
33d1su3a1



not modelled 97.6 23
Fold:PGBD-like
Superfamily:PGBD-like
Family:MMP N-terminal domain
34c1eakA_



not modelled 97.5 16
PDB header:hydrolase/hydrolase inhibitor
Chain: A: PDB Molecule:72 kda type iv collagenase;
PDBTitle: catalytic domain of prommp-2 e404q mutant
35c5th6D_



not modelled 97.4 23
PDB header:hydrolase/hydrolase inhibitor
Chain: D: PDB Molecule:matrix metalloproteinase-9,matrix metalloproteinase-9;
PDBTitle: structure determination of a potent, selective antibody inhibitor of2 human mmp9 (apo mmp9)
36c1l6jA_



not modelled 97.4 24
PDB header:hydrolase
Chain: A: PDB Molecule:matrix metalloproteinase-9;
PDBTitle: crystal structure of human matrix metalloproteinase mmp92 (gelatinase b).
37c1su3A_



not modelled 97.4 25
PDB header:hydrolase
Chain: A: PDB Molecule:interstitial collagenase;
PDBTitle: x-ray structure of human prommp-1: new insights into2 collagenase action
38d2ikba1



not modelled 96.3 27
Fold:Lysozyme-like
Superfamily:Lysozyme-like
Family:NMB1012-like
39d2nr7a1



not modelled 96.1 32
Fold:Lysozyme-like
Superfamily:Lysozyme-like
Family:NMB1012-like
40c1gxdA_



not modelled 95.6 15
PDB header:hydrolase
Chain: A: PDB Molecule:72 kda type iv collagenase;
PDBTitle: prommp-2/timp-2 complex
41d2gfqa1



not modelled 87.2 11
Fold:Phosphorylase/hydrolase-like
Superfamily:AF0625-like
Family:AF0625-like
42c2gfqC_



not modelled 86.6 13
PDB header:structural genomics, unknown function
Chain: C: PDB Molecule:upf0204 protein ph0006;
PDBTitle: structure of protein of unknown function ph0006 from pyrococcus2 horikoshii
43c1u83A_



not modelled 83.6 22
PDB header:lyase
Chain: A: PDB Molecule:phosphosulfolactate synthase;
PDBTitle: psl synthase from bacillus subtilis
44d1u83a_



not modelled 83.6 22
Fold:TIM beta/alpha-barrel
Superfamily:(2r)-phospho-3-sulfolactate synthase ComA
Family:(2r)-phospho-3-sulfolactate synthase ComA
45d1yqea1



not modelled 80.6 15
Fold:Phosphorylase/hydrolase-like
Superfamily:AF0625-like
Family:AF0625-like
46c3na6A_



not modelled 79.4 9
PDB header:hydrolase
Chain: A: PDB Molecule:succinylglutamate desuccinylase/aspartoacylase;
PDBTitle: crystal structure of a succinylglutamate desuccinylase (tm1040_2694)2 from silicibacter sp. tm1040 at 2.00 a resolution
47c3nh8A_



not modelled 78.6 20
PDB header:hydrolase
Chain: A: PDB Molecule:aspartoacylase-2;
PDBTitle: crystal structure of murine aminoacylase 3 in complex with n-acetyl-s-2 1,2-dichlorovinyl-l-cysteine
48c5kojD_



not modelled 77.5 27
PDB header:oxidoreductase
Chain: D: PDB Molecule:nitrogenase femo beta subunit protein nifk;
PDBTitle: nitrogenase mofep protein in the ids oxidized state
49c3cdxB_



not modelled 69.6 11
PDB header:hydrolase
Chain: B: PDB Molecule:succinylglutamatedesuccinylase/aspartoacylase;
PDBTitle: crystal structure of succinylglutamatedesuccinylase/aspartoacylase2 from rhodobacter sphaeroides
50d1nyra1



not modelled 69.4 18
Fold:Anticodon-binding domain-like
Superfamily:Class II aaRS ABD-related
Family:Anticodon-binding domain of Class II aaRS
51d1nj1a1



not modelled 67.3 19
Fold:Anticodon-binding domain-like
Superfamily:Class II aaRS ABD-related
Family:Anticodon-binding domain of Class II aaRS
52d2g4ca1



not modelled 64.8 16
Fold:Anticodon-binding domain-like
Superfamily:Class II aaRS ABD-related
Family:Anticodon-binding domain of Class II aaRS
53d1m1nb_



not modelled 64.7 22
Fold:Chelatase-like
Superfamily:"Helical backbone" metal receptor
Family:Nitrogenase iron-molybdenum protein
54c3t4xA_



not modelled 58.8 24
PDB header:oxidoreductase
Chain: A: PDB Molecule:oxidoreductase, short chain dehydrogenase/reductase family;
PDBTitle: short chain dehydrogenase/reductase family oxidoreductase from2 bacillus anthracis str. ames ancestor
55c4hjhA_



not modelled 58.0 20
PDB header:isomerase
Chain: A: PDB Molecule:phosphomannomutase;
PDBTitle: iodide sad phased crystal structure of a phosphoglucomutase from2 brucella melitensis complexed with glucose-6-phosphate
56c1g5hA_



not modelled 57.3 12
PDB header:dna binding protein
Chain: A: PDB Molecule:mitochondrial dna polymerase accessory subunit;
PDBTitle: crystal structure of the accessory subunit of murine mitochondrial2 polymerase gamma
57c4axvA_



not modelled 54.1 14
PDB header:hydrolase
Chain: A: PDB Molecule:mpaa;
PDBTitle: biochemical and structural characterization of the mpaa2 amidase as part of a conserved scavenging pathway for3 peptidoglycan derived peptides in gamma-proteobacteria
58c3o38D_



not modelled 53.9 20
PDB header:oxidoreductase
Chain: D: PDB Molecule:short chain dehydrogenase;
PDBTitle: crystal structure of a short chain dehydrogenase from mycobacterium2 smegmatis
59d1miob_



not modelled 53.6 21
Fold:Chelatase-like
Superfamily:"Helical backbone" metal receptor
Family:Nitrogenase iron-molybdenum protein
60c3netB_



not modelled 53.0 9
PDB header:ligase
Chain: B: PDB Molecule:histidyl-trna synthetase;
PDBTitle: crystal structure of histidyl-trna synthetase from nostoc sp. pcc 7120
61d1wu7a1



not modelled 52.1 13
Fold:Anticodon-binding domain-like
Superfamily:Class II aaRS ABD-related
Family:Anticodon-binding domain of Class II aaRS
62c5hxdB_



not modelled 48.1 15
PDB header:hydrolase
Chain: B: PDB Molecule:protein mpaa;
PDBTitle: crystal structure of murein-tripeptide amidase mpaa from escherichia2 coli o157
63c1nj2A_



not modelled 47.7 20
PDB header:ligase
Chain: A: PDB Molecule:proline-trna synthetase;
PDBTitle: crystal structure of prolyl-trna synthetase from methanothermobacter2 thermautotrophicus
64d1yw6a1



not modelled 47.6 8
Fold:Phosphorylase/hydrolase-like
Superfamily:Zn-dependent exopeptidases
Family:AstE/AspA-like
65c3r6yG_



not modelled 46.9 29
PDB header:lyase
Chain: G: PDB Molecule:aspartase;
PDBTitle: crystal structure of chymotrypsin-treated aspartase from bacillus sp.2 ym55-1
66d1g5ha1



not modelled 46.4 6
Fold:Anticodon-binding domain-like
Superfamily:Class II aaRS ABD-related
Family:Anticodon-binding domain of Class II aaRS
67d1qe0a1



not modelled 45.2 16
Fold:Anticodon-binding domain-like
Superfamily:Class II aaRS ABD-related
Family:Anticodon-binding domain of Class II aaRS
68c2xdqA_



not modelled 44.8 20
PDB header:oxidoreductase
Chain: A: PDB Molecule:light-independent protochlorophyllide reductase subunit n;
PDBTitle: dark operative protochlorophyllide oxidoreductase (chln-chlb)2 complex
69c3ikmC_



not modelled 43.9 13
PDB header:transferase
Chain: C: PDB Molecule:dna polymerase subunit gamma-2;
PDBTitle: crystal structure of human mitochondrial dna polymerase holoenzyme
70c3a9lB_



not modelled 41.4 17
PDB header:hydrolase
Chain: B: PDB Molecule:poly-gamma-glutamate hydrolase;
PDBTitle: structure of bacteriophage poly-gamma-glutamate hydrolase
71c6mn8A_



not modelled 41.1 12
PDB header:ligase
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of prolyl-trna synthetase from onchocerca volvulus2 with bound halofuginone and nucleotide
72d1vdka_



not modelled 40.8 21
Fold:L-aspartase-like
Superfamily:L-aspartase-like
Family:L-aspartase/fumarase
73c5zy9D_



not modelled 40.8 7
PDB header:ligase
Chain: D: PDB Molecule:threonyl-trna synthase;
PDBTitle: structural basis for a trna synthetase
74d1qh8b_



not modelled 38.4 23
Fold:Chelatase-like
Superfamily:"Helical backbone" metal receptor
Family:Nitrogenase iron-molybdenum protein
75d2i3ca1



not modelled 37.6 11
Fold:Phosphorylase/hydrolase-like
Superfamily:Zn-dependent exopeptidases
Family:AstE/AspA-like
76d1nj8a1



not modelled 37.5 19
Fold:Anticodon-binding domain-like
Superfamily:Class II aaRS ABD-related
Family:Anticodon-binding domain of Class II aaRS
77c4hwtA_



not modelled 37.4 6
PDB header:ligase/ligase inhibitor
Chain: A: PDB Molecule:threonine--trna ligase, cytoplasmic;
PDBTitle: crystal structure of human threonyl-trna synthetase bound to a novel2 inhibitor
78c3i3wB_



not modelled 35.6 19
PDB header:isomerase
Chain: B: PDB Molecule:phosphoglucosamine mutase;
PDBTitle: structure of a phosphoglucosamine mutase from francisella tularensis
79c3no9C_



not modelled 34.3 17
PDB header:lyase
Chain: C: PDB Molecule:fumarate hydratase class ii;
PDBTitle: crystal structure of apo fumarate hydratase from mycobacterium2 tuberculosis
80c3pdiB_



not modelled 33.9 21
PDB header:protein binding
Chain: B: PDB Molecule:nitrogenase mofe cofactor biosynthesis protein nifn;
PDBTitle: precursor bound nifen
81c1wwpA_



not modelled 33.9 14
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein ttha0636;
PDBTitle: crystal structure of ttk003001694 from thermus thermophilus2 hb8
82c2i4lC_



not modelled 33.7 17
PDB header:ligase
Chain: C: PDB Molecule:proline-trna ligase;
PDBTitle: rhodopseudomonas palustris prolyl-trna synthetase
83c2ynmC_



not modelled 32.9 17
PDB header:oxidoreductase
Chain: C: PDB Molecule:light-independent protochlorophyllide reductase subunit n;
PDBTitle: structure of the adpxalf3-stabilized transition state of the2 nitrogenase-like dark-operative protochlorophyllide oxidoreductase3 complex from prochlorococcus marinus with its substrate4 protochlorophyllide a
84d1qwga_



not modelled 30.5 23
Fold:TIM beta/alpha-barrel
Superfamily:(2r)-phospho-3-sulfolactate synthase ComA
Family:(2r)-phospho-3-sulfolactate synthase ComA
85c1y80A_



not modelled 29.5 7
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:predicted cobalamin binding protein;
PDBTitle: structure of a corrinoid (factor iiim)-binding protein from moorella2 thermoacetica
86d1j3ua_



not modelled 29.3 28
Fold:L-aspartase-like
Superfamily:L-aspartase-like
Family:L-aspartase/fumarase
87c6n1mA_



not modelled 29.2 21
PDB header:lyase
Chain: A: PDB Molecule:fumarate hydratase class ii;
PDBTitle: crystal structure of fumarate hydratase class ii from legionella2 pneumophila philadelphia 1
88c2j3mA_



not modelled 29.1 22
PDB header:ligase
Chain: A: PDB Molecule:prolyl-trna synthetase;
PDBTitle: prolyl-trna synthetase from enterococcus faecalis complexed2 with atp, manganese and prolinol
89c1fyfB_



not modelled 27.1 9
PDB header:ligase
Chain: B: PDB Molecule:threonyl-trna synthetase;
PDBTitle: crystal structure of a truncated form of threonyl-trna2 synthetase complexed with a seryl adenylate analog
90c4kr3A_



not modelled 26.9 16
PDB header:ligase/rna
Chain: A: PDB Molecule:glycine--trna ligase;
PDBTitle: glycyl-trna synthetase mutant e71g in complex with trna-gly
91c3hriF_



not modelled 26.4 13
PDB header:ligase
Chain: F: PDB Molecule:histidyl-trna synthetase;
PDBTitle: histidyl-trna synthetase (apo) from trypanosoma brucei
92c5jydA_



not modelled 25.9 17
PDB header:oxidoreductase
Chain: A: PDB Molecule:short chain dehydrogenase;
PDBTitle: crystal structure of a putative short chain dehydrogenase from2 burkholderia cenocepacia
93c5z5eB_



not modelled 25.9 15
PDB header:ligase
Chain: B: PDB Molecule:neq417;
PDBTitle: crystal structure of the glycyl-trna synthetase (glyrs) in2 nanoarchaeum equitans
94d1jswc_



not modelled 25.8 26
Fold:L-aspartase-like
Superfamily:L-aspartase-like
Family:L-aspartase/fumarase
95c1ggmB_



not modelled 25.8 20
PDB header:ligase
Chain: B: PDB Molecule:glycine--trna ligase;
PDBTitle: glycyl-trna synthetase from thermus thermophilus complexed with2 glycyl-adenylate
96d1iy8a_



not modelled 25.8 35
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Tyrosine-dependent oxidoreductases
97d1jswa_



not modelled 25.4 26
Fold:L-aspartase-like
Superfamily:L-aspartase-like
Family:L-aspartase/fumarase
98c1c4gB_



not modelled 24.8 20
PDB header:transferase
Chain: B: PDB Molecule:protein (alpha-d-glucose 1-phosphate phosphoglucomutase);
PDBTitle: phosphoglucomutase vanadate based transition state analog complex
99c3gtdB_



not modelled 24.3 22
PDB header:lyase
Chain: B: PDB Molecule:fumarate hydratase class ii;
PDBTitle: 2.4 angstrom crystal structure of fumarate hydratase from rickettsia2 prowazekii
100c6gyzB_



not modelled 24.0 12
PDB header:isomerase
Chain: B: PDB Molecule:phosphoglucosamine mutase;
PDBTitle: crystal structure of glmm from staphylococcus aureus
101c4hgvC_



not modelled 23.8 22
PDB header:lyase
Chain: C: PDB Molecule:fumarate hydratase class ii;
PDBTitle: crystal structure of a fumarate hydratase
102c5e6mA_



not modelled 23.8 18
PDB header:ligase/rna
Chain: A: PDB Molecule:glycine--trna ligase;
PDBTitle: crystal structure of human wild type glyrs bound with trnagly
103c3uw2A_



not modelled 23.5 21
PDB header:isomerase
Chain: A: PDB Molecule:phosphoglucomutase/phosphomannomutase family protein;
PDBTitle: x-ray crystal structure of phosphoglucomutase/phosphomannomutase2 family protein (bth_i1489)from burkholderia thailandensis
104d1aora1



not modelled 23.3 30
Fold:Aldehyde ferredoxin oxidoreductase, C-terminal domains
Superfamily:Aldehyde ferredoxin oxidoreductase, C-terminal domains
Family:Aldehyde ferredoxin oxidoreductase, C-terminal domains
105d2qwxa1



not modelled 23.1 18
Fold:Flavodoxin-like
Superfamily:Flavoproteins
Family:Quinone reductase
106d1v8za1



not modelled 23.1 24
Fold:Tryptophan synthase beta subunit-like PLP-dependent enzymes
Superfamily:Tryptophan synthase beta subunit-like PLP-dependent enzymes
Family:Tryptophan synthase beta subunit-like PLP-dependent enzymes
107c1atiA_



not modelled 22.9 20
PDB header:protein biosynthesis
Chain: A: PDB Molecule:glycyl-trna synthetase;
PDBTitle: crystal structure of glycyl-trna synthetase from thermus thermophilus
108c3e04C_



not modelled 22.5 26
PDB header:lyase
Chain: C: PDB Molecule:fumarate hydratase;
PDBTitle: crystal structure of human fumarate hydratase
109c1yfmA_



not modelled 22.5 17
PDB header:lyase
Chain: A: PDB Molecule:fumarase;
PDBTitle: recombinant yeast fumarase
110d1yfma_



not modelled 22.5 17
Fold:L-aspartase-like
Superfamily:L-aspartase-like
Family:L-aspartase/fumarase
111c1wu7A_



not modelled 22.3 13
PDB header:ligase
Chain: A: PDB Molecule:histidyl-trna synthetase;
PDBTitle: crystal structure of histidyl-trna synthetase from2 thermoplasma acidophilum
112c5onkA_



not modelled 22.3 15
PDB header:hydrolase
Chain: A: PDB Molecule:yndl;
PDBTitle: native yndl
113c4a37A_



not modelled 22.3 12
PDB header:hydrolase
Chain: A: PDB Molecule:metallo-carboxypeptidase;
PDBTitle: metallo-carboxypeptidase from pseudomonas aeruginosa
114d1qf6a1



not modelled 22.1 11
Fold:Anticodon-binding domain-like
Superfamily:Class II aaRS ABD-related
Family:Anticodon-binding domain of Class II aaRS
115d1gtda_



not modelled 21.6 30
Fold:PurS-like
Superfamily:PurS-like
Family:PurS subunit of FGAM synthetase
116c2zw2B_



not modelled 21.5 13
PDB header:ligase
Chain: B: PDB Molecule:putative uncharacterized protein sts178;
PDBTitle: crystal structure of formylglycinamide ribonucleotide amidotransferase2 iii from sulfolobus tokodaii (stpurs)
117c2yx5A_



not modelled 21.4 30
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:upf0062 protein mj1593;
PDBTitle: crystal structure of methanocaldococcus jannaschii purs, one of the2 subunits of formylglycinamide ribonucleotide amidotransferase in the3 purine biosynthetic pathway
118c4e51B_



not modelled 21.1 18
PDB header:ligase
Chain: B: PDB Molecule:histidine--trna ligase;
PDBTitle: crystal structure of a histidyl-trna synthetase hisrs from2 burkholderia thailandensis bound to histidine
119d1kfia2



not modelled 21.0 17
Fold:Phosphoglucomutase, first 3 domains
Superfamily:Phosphoglucomutase, first 3 domains
Family:Phosphoglucomutase, first 3 domains
120c6nhiA_



not modelled 20.9 13
PDB header:ligase
Chain: A: PDB Molecule:histidine--trna ligase;
PDBTitle: crystal structure of histidine--trna ligase from elizabethkingia sp.2 ccug 26117

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below