Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD0354c_(PPE7)_424144_424695
DateTue Jul 23 14:50:42 BST 2019
Unique Job ID55b8360c9f40a825
SequenceVSVCVIYIPF ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:27.928 Y:23.082 Z:22.842
Model (left) based on template d2in1a1
Top template information
Fold:UBC-like
Superfamily:UBC-like
Family:UFC1-like
Confidence and coverage
Confidence: 11.4% Coverage: 10%
19 residues ( 10% of your sequence) have been modelled with 11.4% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
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3D viewing
Interactive 3D view in JSmol
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Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d2in1a1
11.4 16
Fold:UBC-like
Superfamily:UBC-like
Family:UFC1-like
2c3kpaB_
9.5 16
PDB header:ligase
Chain: B: PDB Molecule:probable ubiquitin fold modifier conjugating enzyme;
PDBTitle: ubiquitin fold modifier conjugating enzyme from leishmania major2 (probable)
3c1wwyA_
6.1 24
PDB header:apoptosis
Chain: A: PDB Molecule:thioredoxin-like protein 1;
PDBTitle: solution structure of the duf1000 domain of a thioredoxin-like protein2 1
4d2hkja2
6.0 45
Fold:Ribosomal protein S5 domain 2-like
Superfamily:Ribosomal protein S5 domain 2-like
Family:DNA gyrase/MutL, second domain

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite