Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1352_(-)_1518769_1519140
DateWed Jul 31 22:05:45 BST 2019
Unique Job ID6fd453f8b0f51cc0
SequenceMARTLALRAS ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:26.375 Y:41.261 Z:37.707
Model (left) based on template d1wlga_
Top template information
Fold:Flagellar hook protein flgE
Superfamily:Flagellar hook protein flgE
Family:Flagellar hook protein flgE
Confidence and coverage
Confidence: 18.5% Coverage: 40%
49 residues ( 40% of your sequence) have been modelled with 18.5% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1wlga_
18.5 16
Fold:Flagellar hook protein flgE
Superfamily:Flagellar hook protein flgE
Family:Flagellar hook protein flgE
2c5az4A_
17.8 18
PDB header:motor protein
Chain: A: PDB Molecule:flagellar hook subunit protein;
PDBTitle: crystal structure of a 79kda fragment of flge, the hook protein from2 campylobacter jejuni
3c4kh9B_
14.5 24
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:hypothetical protein;
PDBTitle: crystal structure of a duf4785 family protein (lpg0956) from2 legionella pneumophila subsp. pneumophila str. philadelphia 1 at 2.003 a resolution
4c3k0bA_
13.9 38
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:predicted n6-adenine-specific dna methylase;
PDBTitle: crystal structure of a predicted n6-adenine-specific dna methylase2 from listeria monocytogenes str. 4b f2365
5d1ht6a1
12.8 24
Fold:Glycosyl hydrolase domain
Superfamily:Glycosyl hydrolase domain
Family:alpha-Amylases, C-terminal beta-sheet domain
6d1o9ga_
12.7 18
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:rRNA methyltransferase AviRa
7c3be3A_
11.7 63
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a protein belonging to pfam duf16532 from bordetella bronchiseptica
8c5npyA_
11.2 8
PDB header:motor protein
Chain: A: PDB Molecule:flagellar basal body protein;
PDBTitle: crystal structure of helicobacter pylori flagellar hook protein flge2
9c4js0B_
10.1 29
PDB header:signaling protein/signaling protein
Chain: B: PDB Molecule:brain-specific angiogenesis inhibitor 1-associated protein
PDBTitle: complex of cdc42 with the crib-pr domain of irsp53
10c3a0fA_
9.6 17
PDB header:hydrolase
Chain: A: PDB Molecule:xyloglucanase;
PDBTitle: the crystal structure of geotrichum sp. m128 xyloglucanase
11c3v8vB_
9.2 43
PDB header:transferase
Chain: B: PDB Molecule:ribosomal rna large subunit methyltransferase l;
PDBTitle: crystal structure of bifunctional methyltransferase ycby (rlmlk) from2 escherichia coli, sam binding
12c2mwrA_
9.1 50
PDB header:antimicrobial protein
Chain: A: PDB Molecule:acidocin b;
PDBTitle: solution structure of acidocin b, a circular bacteriocin from2 lactobacillus acidophilus m46
13d1zdva1
9.1 60
Fold:FimD N-terminal domain-like
Superfamily:FimD N-terminal domain-like
Family:Usher N-domain
14d1zdxa1
8.9 60
Fold:FimD N-terminal domain-like
Superfamily:FimD N-terminal domain-like
Family:Usher N-domain
15c2cn2C_
8.4 10
PDB header:hydrolase
Chain: C: PDB Molecule:beta-1,4-xyloglucan hydrolase;
PDBTitle: crystal structures of clostridium thermocellum2 xyloglucanase
16d2jdid2
8.4 41
Fold:Domain of alpha and beta subunits of F1 ATP synthase-like
Superfamily:N-terminal domain of alpha and beta subunits of F1 ATP synthase
Family:N-terminal domain of alpha and beta subunits of F1 ATP synthase
17c2ebsB_
8.4 14
PDB header:hydrolase
Chain: B: PDB Molecule:oligoxyloglucan reducing end-specific
PDBTitle: crystal structure anaalysis of oligoxyloglucan reducing-end-2 specific cellobiohydrolase (oxg-rcbh) d465n mutant3 complexed with a xyloglucan heptasaccharide
18c3nrqB_
8.3 31
PDB header:transport protein
Chain: B: PDB Molecule:periplasmic protein-probably involved in high-affinity fe2+
PDBTitle: crystal structure of copper-reconstituted fetp from uropathogenic2 escherichia coli strain f11
19c5a6wC_
8.3 30
PDB header:antiviral protein
Chain: C: PDB Molecule:avr-pik protein;
PDBTitle: complex of rice blast (magnaporthe oryzae) effector protein avr-pikd2 with the hma domain of pikp1 from rice (oryza sativa)
20c4parC_
7.9 8
PDB header:dna binding protein/dna
Chain: C: PDB Molecule:uncharacterized protein abasi;
PDBTitle: the 5-hydroxymethylcytosine-specific restriction enzyme abasi in a2 complex with product-like dna
21d1pe4a_
not modelled 7.5 20
Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:Scorpion toxin-like
Family:Long-chain scorpion toxins
22d1avaa1
not modelled 7.1 24
Fold:Glycosyl hydrolase domain
Superfamily:Glycosyl hydrolase domain
Family:alpha-Amylases, C-terminal beta-sheet domain
23d2nn6h2
not modelled 6.9 22
Fold:Barrel-sandwich hybrid
Superfamily:Ribosomal L27 protein-like
Family:ECR1 N-terminal domain-like
24d1q42a_
not modelled 6.8 56
Fold:Cystatin-like
Superfamily:NTF2-like
Family:NTF2-like
25c6ffyA_
not modelled 6.8 9
PDB header:apoptosis
Chain: A: PDB Molecule:vps10 domain-containing receptor sorcs2;
PDBTitle: structure of the mouse sorcs2-ngf complex
26c2xtlB_
not modelled 6.6 33
PDB header:structural protein
Chain: B: PDB Molecule:cell wall surface anchor family protein;
PDBTitle: structure of the major pilus backbone protein from streptococcus2 agalactiae
27c3rpkA_
not modelled 6.5 40
PDB header:cell adhesion
Chain: A: PDB Molecule:backbone pilus subunit;
PDBTitle: structure of the full-length major pilin rrgb from streptococcus2 pneumoniae
28c6f0kD_
not modelled 6.3 15
PDB header:membrane protein
Chain: D: PDB Molecule:actd;
PDBTitle: alternative complex iii
29d2ba0a2
not modelled 6.2 26
Fold:Barrel-sandwich hybrid
Superfamily:Ribosomal L27 protein-like
Family:ECR1 N-terminal domain-like
30d2adza1
not modelled 6.1 15
Fold:PH domain-like barrel
Superfamily:PH domain-like
Family:Pleckstrin-homology domain (PH domain)
31c2k9uB_
not modelled 6.0 75
PDB header:structural protein
Chain: B: PDB Molecule:filamin-binding lim protein 1;
PDBTitle: solution nmr structure of the filamin-migfilin complex
32c6ftkA_
not modelled 5.9 9
PDB header:viral protein
Chain: A: PDB Molecule:envelope protein;
PDBTitle: gp36-mper
33c3rlcA_
not modelled 5.9 25
PDB header:structural protein
Chain: A: PDB Molecule:a1 protein;
PDBTitle: crystal structure of the read-through domain from bacteriophage qbeta2 a1 protein, hexagonal crystal form
34c1ikqA_
not modelled 5.8 18
PDB header:transferase
Chain: A: PDB Molecule:exotoxin a;
PDBTitle: pseudomonas aeruginosa exotoxin a, wild type
35d1z0mb1
not modelled 5.8 19
Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:AMPK-beta glycogen binding domain-like
36c2qeyA_
not modelled 5.7 34
PDB header:lyase
Chain: A: PDB Molecule:phosphoenolpyruvate carboxykinase, cytosolic [gtp];
PDBTitle: rat cytosolic pepck in complex with gtp
37c1q40C_
not modelled 5.7 56
PDB header:translation
Chain: C: PDB Molecule:mrna transport regulator mtr2;
PDBTitle: crystal structure of the c. albicans mtr2-mex67 m domain complex
38c3q8jA_
not modelled 5.4 33
PDB header:toxin
Chain: A: PDB Molecule:asteropsin a;
PDBTitle: crystal structure of asteropsin a from marine sponge asteropus sp.
39d3bwud1
not modelled 5.3 54
Fold:FimD N-terminal domain-like
Superfamily:FimD N-terminal domain-like
Family:Usher N-domain

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