Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1996_(-)_2239012_2239965
DateMon Aug 5 13:25:10 BST 2019
Unique Job IDe77c0a698a116ef9
SequenceMSAQQTNLGI ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:67.995 Y:40.835 Z:51.578
Model (left) based on template c2jaxA_
Top template information
PDB header:protein binding
Chain: A: PDB Molecule:hypothetical protein tb31.7;
PDBTitle: universal stress protein rv2623 from mycobaterium2 tuberculosis
Confidence and coverage
Confidence:100.0% Coverage: 82%
260 residues ( 82% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
316 residues (100%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2jaxA_



100.0 50
PDB header:protein binding
Chain: A: PDB Molecule:hypothetical protein tb31.7;
PDBTitle: universal stress protein rv2623 from mycobaterium2 tuberculosis
2c3olqA_



100.0 12
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:universal stress protein e;
PDBTitle: the crystal structure of a universal stress protein e from proteus2 mirabilis hi4320
3c3loqA_



100.0 22
PDB header:structure genomics, unknown function
Chain: A: PDB Molecule:universal stress protein;
PDBTitle: the crystal structure of a universal stress protein from archaeoglobus2 fulgidus dsm 4304
4c3mt0A_



100.0 17
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein pa1789;
PDBTitle: the crystal structure of a functionally unknown protein pa1789 from2 pseudomonas aeruginosa pao1
5c3ab8B_



100.0 20
PDB header:unknown function
Chain: B: PDB Molecule:putative uncharacterized protein ttha0350;
PDBTitle: crystal structure of the hypothetical tandem-type universal stress2 protein ttha0350 complexed with atps.
6c4r2jA_



100.0 14
PDB header:metal binding protein, unknown function
Chain: A: PDB Molecule:universal stress protein e;
PDBTitle: crystal structure of ydaa (universal stress protein e) from salmonella2 typhimurium
7d1tq8a_



99.8 37
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Adenine nucleotide alpha hydrolases-like
Family:Universal stress protein-like
8c5ahwC_



99.8 23
PDB header:signaling protein
Chain: C: PDB Molecule:universal stress protein;
PDBTitle: crystal structure of universal stress protein msmeg_3811 in2 complex with camp
9c3s3tD_



99.8 19
PDB header:chaperone
Chain: D: PDB Molecule:nucleotide-binding protein, universal stress protein uspa
PDBTitle: universal stress protein uspa from lactobacillus plantarum
10c3dloC_



99.8 25
PDB header:structural genomics, unknown function
Chain: C: PDB Molecule:universal stress protein;
PDBTitle: structure of universal stress protein from archaeoglobus fulgidus
11c3fh0A_



99.8 37
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative universal stress protein kpn_01444;
PDBTitle: crystal structure of putative universal stress protein kpn_01444 -2 atpase
12c3hgmD_



99.8 24
PDB header:signaling protein
Chain: D: PDB Molecule:universal stress protein tead;
PDBTitle: universal stress protein tead from the trap transporter teaabc of2 halomonas elongata
13d2z3va1



99.8 24
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Adenine nucleotide alpha hydrolases-like
Family:Universal stress protein-like
14d1mjha_



99.8 18
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Adenine nucleotide alpha hydrolases-like
Family:Universal stress protein-like
15d2gm3a1



99.8 20
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Adenine nucleotide alpha hydrolases-like
Family:Universal stress protein-like
16c4wnyA_



99.7 22
PDB header:signaling protein
Chain: A: PDB Molecule:universal stress protein;
PDBTitle: crystal structure of a protein from the universal stress protein2 family from burkholderia pseudomallei
17c3fg9B_



99.7 18
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:protein of universal stress protein uspa family;
PDBTitle: the crystal structure of an universal stress protein uspa2 family protein from lactobacillus plantarum wcfs1
18c4r2lB_



99.7 24
PDB header:unknown function
Chain: B: PDB Molecule:universal stress protein f;
PDBTitle: crystal structure of ynaf (universal stress protein f) from salmonella2 typhimurium
19c2dumD_



99.7 16
PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:hypothetical protein ph0823;
PDBTitle: crystal structure of hypothetical protein, ph0823
20d1jmva_



99.7 18
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Adenine nucleotide alpha hydrolases-like
Family:Universal stress protein-like
21c2pfsA_



not modelled 99.6 23
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:universal stress protein;
PDBTitle: crystal structure of universal stress protein from nitrosomonas2 europaea
22c3idfA_



not modelled 99.6 18
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:usp-like protein;
PDBTitle: the crystal structure of a usp-like protein from wolinella2 succinogenes to 2.0a
23d1q77a_



not modelled 99.6 14
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Adenine nucleotide alpha hydrolases-like
Family:Universal stress protein-like
24c3g40A_



not modelled 94.0 10
PDB header:transport protein
Chain: A: PDB Molecule:na-k-cl cotransporter;
PDBTitle: crystal structure of the cytoplasmic domain of a2 prokaryotic cation chloride cotransporter
25c6eoaA_



not modelled 76.7 23
PDB header:flavoprotein
Chain: A: PDB Molecule:phosphopantothenoylcysteine decarboxylase;
PDBTitle: crystal structure of hal3 from cryptococcus neoformans
26c4kpuB_



not modelled 69.3 19
PDB header:electron transport
Chain: B: PDB Molecule:electron transfer flavoprotein alpha/beta-subunit;
PDBTitle: electron transferring flavoprotein of acidaminococcus fermentans:2 towards a mechanism of flavin-based electron bifurcation
27c3a2kB_



not modelled 66.8 18
PDB header:ligase/rna
Chain: B: PDB Molecule:trna(ile)-lysidine synthase;
PDBTitle: crystal structure of tils complexed with trna
28c6qlgD_



not modelled 65.8 20
PDB header:transferase
Chain: D: PDB Molecule:flavin prenyltransferase pad1, mitochondrial;
PDBTitle: crystal structure of anubix (pada1) in complex with fmn and2 dimethylallyl pyrophosphate
29d1sbza_



not modelled 63.7 21
Fold:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
Superfamily:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
Family:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
30c6jlsA_



not modelled 62.5 23
PDB header:biosynthetic protein
Chain: A: PDB Molecule:putative flavoprotein decarboxylase;
PDBTitle: crystal structure of fmn-dependent cysteine decarboxylases tvaf from2 thioviridamide biosynthesis
31c5ol2E_



not modelled 61.4 15
PDB header:flavoprotein
Chain: E: PDB Molecule:electron transfer flavoprotein small subunit;
PDBTitle: the electron transferring flavoprotein/butyryl-coa dehydrogenase2 complex from clostridium difficile
32c4r3uD_



not modelled 58.9 14
PDB header:isomerase
Chain: D: PDB Molecule:2-hydroxyisobutyryl-coa mutase small subunit;
PDBTitle: crystal structure of 2-hydroxyisobutyryl-coa mutase
33c4n7bA_



not modelled 58.4 13
PDB header:oxidoreductase
Chain: A: PDB Molecule:lytb;
PDBTitle: structure of the e-1-hydroxy-2-methyl-but-2-enyl-4-diphosphate2 reductase from plasmodium falciparum
34c3zquA_



not modelled 56.9 9
PDB header:lyase
Chain: A: PDB Molecule:probable aromatic acid decarboxylase;
PDBTitle: structure of a probable aromatic acid decarboxylase
35d2ajta2



not modelled 55.8 5
Fold:FucI/AraA N-terminal and middle domains
Superfamily:FucI/AraA N-terminal and middle domains
Family:AraA N-terminal and middle domain-like
36c1kh2D_



not modelled 52.4 12
PDB header:ligase
Chain: D: PDB Molecule:argininosuccinate synthetase;
PDBTitle: crystal structure of thermus thermophilus hb8 argininosuccinate2 synthetase in complex with atp
37c3dnfB_



not modelled 50.5 9
PDB header:oxidoreductase
Chain: B: PDB Molecule:4-hydroxy-3-methylbut-2-enyl diphosphate reductase;
PDBTitle: structure of (e)-4-hydroxy-3-methyl-but-2-enyl diphosphate reductase,2 the terminal enzyme of the non-mevalonate pathway
38c5ow0B_



not modelled 48.1 18
PDB header:electron transport
Chain: B: PDB Molecule:electron transfer flavoprotein, beta subunit;
PDBTitle: crystal structure of an electron transfer flavoprotein from2 geobacillus metallireducens
39c2ppvA_



not modelled 46.8 21
PDB header:transferase
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a protein belonging to the upf0052 (se_0549) from2 staphylococcus epidermidis atcc 12228 at 2.00 a resolution
40d1p3y1_



not modelled 45.5 21
Fold:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
Superfamily:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
Family:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
41c1ni5A_



not modelled 44.6 26
PDB header:cell cycle
Chain: A: PDB Molecule:putative cell cycle protein mesj;
PDBTitle: structure of the mesj pp-atpase from escherichia coli
42c2e21A_



not modelled 43.0 5
PDB header:ligase
Chain: A: PDB Molecule:trna(ile)-lysidine synthase;
PDBTitle: crystal structure of tils in a complex with amppnp from aquifex2 aeolicus.
43c2p0yA_



not modelled 40.5 24
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein lp_0780;
PDBTitle: crystal structure of q88yi3_lacpl from lactobacillus plantarum.2 northeast structural genomics consortium target lpr6
44d1owla2



not modelled 38.4 15
Fold:Cryptochrome/photolyase, N-terminal domain
Superfamily:Cryptochrome/photolyase, N-terminal domain
Family:Cryptochrome/photolyase, N-terminal domain
45c4rheB_



not modelled 36.3 16
PDB header:lyase
Chain: B: PDB Molecule:3-octaprenyl-4-hydroxybenzoate carboxy-lyase;
PDBTitle: crystal structure of ubix, an aromatic acid decarboxylase from the2 colwellia psychrerythraea 34h
46d2hzba1



not modelled 36.3 19
Fold:CofD-like
Superfamily:CofD-like
Family:CofD-like
47c2xrzA_



not modelled 35.8 11
PDB header:lyase/dna
Chain: A: PDB Molecule:deoxyribodipyrimidine photolyase;
PDBTitle: x-ray structure of archaeal class ii cpd photolyase from2 methanosarcina mazei in complex with intact cpd-lesion
48d1m7ja3



not modelled 34.1 17
Fold:TIM beta/alpha-barrel
Superfamily:Metallo-dependent hydrolases
Family:D-aminoacylase, catalytic domain
49c6fkxD_



not modelled 33.8 17
PDB header:hydrolase
Chain: D: PDB Molecule:acetyl xylan esterase;
PDBTitle: crystal structure of an acetyl xylan esterase from a desert metagenome
50c6fahB_



not modelled 33.4 19
PDB header:flavoprotein
Chain: B: PDB Molecule:caffeyl-coa reductase-etf complex subunit card;
PDBTitle: molecular basis of the flavin-based electron-bifurcating caffeyl-coa2 reductase reaction
51c3s40C_



not modelled 33.0 14
PDB header:transferase
Chain: C: PDB Molecule:diacylglycerol kinase;
PDBTitle: the crystal structure of a diacylglycerol kinases from bacillus2 anthracis str. sterne
52c2ejbA_



not modelled 32.9 9
PDB header:lyase
Chain: A: PDB Molecule:probable aromatic acid decarboxylase;
PDBTitle: crystal structure of phenylacrylic acid decarboxylase from2 aquifex aeolicus
53c2hxgB_



not modelled 32.3 5
PDB header:isomerase
Chain: B: PDB Molecule:l-arabinose isomerase;
PDBTitle: crystal structure of mn2+ bound ecai
54d1qzua_



not modelled 32.3 21
Fold:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
Superfamily:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
Family:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
55d1np7a2



not modelled 32.0 10
Fold:Cryptochrome/photolyase, N-terminal domain
Superfamily:Cryptochrome/photolyase, N-terminal domain
Family:Cryptochrome/photolyase, N-terminal domain
56c5h75B_



not modelled 31.7 20
PDB header:lyase
Chain: B: PDB Molecule:mersacidin decarboxylase,immunoglobulin g-binding protein
PDBTitle: crystal structure of the mrsd-protein a fusion protein
57c4r1oF_



not modelled 31.7 8
PDB header:isomerase
Chain: F: PDB Molecule:l-arabinose isomerase;
PDBTitle: crystal structure of thermophilic geobacillus kaustophilus l-arabinose2 isomerase
58c3fcyB_



not modelled 31.3 13
PDB header:hydrolase
Chain: B: PDB Molecule:xylan esterase 1;
PDBTitle: crystal structure of acetyl xylan esterase 1 from2 thermoanaerobacterium sp. jw/sl ys485
59d1g5qa_



not modelled 30.7 6
Fold:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
Superfamily:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
Family:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
60c1qzuB_



not modelled 30.2 21
PDB header:lyase
Chain: B: PDB Molecule:hypothetical protein mds018;
PDBTitle: crystal structure of human phosphopantothenoylcysteine decarboxylase
61c3mveB_



not modelled 30.1 21
PDB header:lyase
Chain: B: PDB Molecule:upf0255 protein vv1_0328;
PDBTitle: crystal structure of a novel pyruvate decarboxylase
62d1j20a1



not modelled 29.1 12
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Adenine nucleotide alpha hydrolases-like
Family:N-type ATP pyrophosphatases
63c2yxbA_



not modelled 29.0 11
PDB header:isomerase
Chain: A: PDB Molecule:coenzyme b12-dependent mutase;
PDBTitle: crystal structure of the methylmalonyl-coa mutase alpha-subunit from2 aeropyrum pernix
64d1mvla_



not modelled 28.3 12
Fold:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
Superfamily:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
Family:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
65c1mvlA_



not modelled 28.3 12
PDB header:lyase
Chain: A: PDB Molecule:ppc decarboxylase athal3a;
PDBTitle: ppc decarboxylase mutant c175s
66d1xrsa_



not modelled 28.2 13
Fold:TIM beta/alpha-barrel
Superfamily:Cobalamin (vitamin B12)-dependent enzymes
Family:D-lysine 5,6-aminomutase alpha subunit, KamD
67d1o94c_



not modelled 26.6 22
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Adenine nucleotide alpha hydrolases-like
Family:ETFP subunits
68c2fzvC_



not modelled 26.5 16
PDB header:structural genomics, unknown function
Chain: C: PDB Molecule:putative arsenical resistance protein;
PDBTitle: crystal structure of an apo form of a flavin-binding protein from2 shigella flexneri
69c3vrhA_



not modelled 26.3 15
PDB header:rna binding protein
Chain: A: PDB Molecule:putative uncharacterized protein ph0300;
PDBTitle: crystal structure of ph0300
70c3urkA_



not modelled 24.8 18
PDB header:oxidoreductase
Chain: A: PDB Molecule:4-hydroxy-3-methylbut-2-enyl diphosphate reductase;
PDBTitle: isph in complex with propynyl diphosphate (1061)
71c3ke8A_



not modelled 24.8 18
PDB header:oxidoreductase
Chain: A: PDB Molecule:4-hydroxy-3-methylbut-2-enyl diphosphate reductase;
PDBTitle: crystal structure of isph:hmbpp-complex
72d1ni5a1



not modelled 24.4 26
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Adenine nucleotide alpha hydrolases-like
Family:PP-loop ATPase
73d3clsd1



not modelled 24.4 17
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Adenine nucleotide alpha hydrolases-like
Family:ETFP subunits
74c2q0xA_



not modelled 23.3 17
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: alpha/beta hydrolase fold protein of unknown function
75d2j07a2



not modelled 22.6 15
Fold:Cryptochrome/photolyase, N-terminal domain
Superfamily:Cryptochrome/photolyase, N-terminal domain
Family:Cryptochrome/photolyase, N-terminal domain
76c2j289_



not modelled 22.5 10
PDB header:ribosome
Chain: 9: PDB Molecule:signal recognition particle 54;
PDBTitle: model of e. coli srp bound to 70s rncs
77c2vefB_



not modelled 22.3 8
PDB header:transferase
Chain: B: PDB Molecule:dihydropteroate synthase;
PDBTitle: dihydropteroate synthase from streptococcus pneumoniae
78c4nzpA_



not modelled 22.0 13
PDB header:ligase
Chain: A: PDB Molecule:argininosuccinate synthase;
PDBTitle: the crystal structure of argininosuccinate synthase from campylobacter2 jejuni subsp. jejuni nctc 11168
79d1vlqa_



not modelled 20.5 13
Fold:alpha/beta-Hydrolases
Superfamily:alpha/beta-Hydrolases
Family:Acetyl xylan esterase-like
80c1o94D_



not modelled 20.4 17
PDB header:electron transport
Chain: D: PDB Molecule:electron transfer flavoprotein alpha-subunit;
PDBTitle: ternary complex between trimethylamine dehydrogenase and2 electron transferring flavoprotein
81c2nz2A_



not modelled 19.6 10
PDB header:ligase
Chain: A: PDB Molecule:argininosuccinate synthase;
PDBTitle: crystal structure of human argininosuccinate synthase in complex with2 aspartate and citrulline
82c5ghaC_



not modelled 19.5 12
PDB header:transferase/transport protein
Chain: C: PDB Molecule:sulfur transferase ttua;
PDBTitle: sulfur transferase ttua in complex with sulfur carrier ttub
83d2g0ta1



not modelled 18.6 21
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nitrogenase iron protein-like
84c1vl2C_



not modelled 18.3 9
PDB header:ligase
Chain: C: PDB Molecule:argininosuccinate synthase;
PDBTitle: crystal structure of argininosuccinate synthase (tm1780) from2 thermotoga maritima at 1.65 a resolution
85d3clsc1



not modelled 18.0 22
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Adenine nucleotide alpha hydrolases-like
Family:ETFP subunits
86d1to6a_



not modelled 17.9 21
Fold:Glycerate kinase I
Superfamily:Glycerate kinase I
Family:Glycerate kinase I
87d1p5dx1



not modelled 17.6 19
Fold:Phosphoglucomutase, first 3 domains
Superfamily:Phosphoglucomutase, first 3 domains
Family:Phosphoglucomutase, first 3 domains
88c3llcA_



not modelled 17.2 30
PDB header:hydrolase
Chain: A: PDB Molecule:putative hydrolase;
PDBTitle: crystal structure of putative hydrolase (yp_002548124.1) from2 agrobacterium vitis s4 at 1.80 a resolution
89c1w2wJ_



not modelled 17.0 9
PDB header:isomerase
Chain: J: PDB Molecule:5-methylthioribose-1-phosphate isomerase;
PDBTitle: crystal structure of yeast ypr118w, a methylthioribose-1-phosphate2 isomerase related to regulatory eif2b subunits
90c3qjgD_



not modelled 16.7 13
PDB header:oxidoreductase
Chain: D: PDB Molecule:epidermin biosynthesis protein epid;
PDBTitle: epidermin biosynthesis protein epid from staphylococcus aureus
91c3mcuF_



not modelled 16.7 22
PDB header:oxidoreductase
Chain: F: PDB Molecule:dipicolinate synthase, b chain;
PDBTitle: crystal structure of the dipicolinate synthase chain b from bacillus2 cereus. northeast structural genomics consortium target bcr215.
92c2j4dA_



not modelled 16.5 13
PDB header:dna binding protein
Chain: A: PDB Molecule:cryptochrome dash;
PDBTitle: cryptochrome 3 from arabidopsis thaliana
93c6jddA_



not modelled 16.3 17
PDB header:biosynthetic protein
Chain: A: PDB Molecule:cypemycin cysteine dehydrogenase (decarboxylating);
PDBTitle: crystal structure of the cypemycin decarboxylase cypd.
94d2jbwa1



not modelled 16.0 24
Fold:alpha/beta-Hydrolases
Superfamily:alpha/beta-Hydrolases
Family:2,6-dihydropseudooxynicotine hydrolase-like
95c2qs9A_



not modelled 15.9 15
PDB header:structural protein
Chain: A: PDB Molecule:retinoblastoma-binding protein 9;
PDBTitle: crystal structure of the human retinoblastoma-binding2 protein 9 (rbbp-9). nesg target hr2978
96d1s5pa_



not modelled 15.5 11
Fold:DHS-like NAD/FAD-binding domain
Superfamily:DHS-like NAD/FAD-binding domain
Family:Sir2 family of transcriptional regulators
97c3c04A_



not modelled 15.4 19
PDB header:isomerase
Chain: A: PDB Molecule:phosphomannomutase/phosphoglucomutase;
PDBTitle: structure of the p368g mutant of pmm/pgm from p. aeruginosa
98c4ao6A_



not modelled 15.3 14
PDB header:hydrolase
Chain: A: PDB Molecule:esterase;
PDBTitle: native structure of a novel cold-adapted esterase from an2 arctic intertidal metagenomic library
99c5gafi_



not modelled 15.1 13
PDB header:ribosome
Chain: I: PDB Molecule:50s ribosomal protein l10;
PDBTitle: rnc in complex with srp

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