Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2051c_(ppm1)_2308139_2310763
DateMon Aug 5 13:25:16 BST 2019
Unique Job ID4aca70684ab8f2b1
SequenceVKLGAWVAAQ ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:66.327 Y:49.361 Z:90.803
Model (left) based on template c5vrhA_
Top template information
PDB header:transferase
Chain: A: PDB Molecule:apolipoprotein n-acyltransferase;
PDBTitle: apolipoprotein n-acyltransferase c387s active site mutant
Confidence and coverage
Confidence:100.0% Coverage: 53%
465 residues ( 53% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
731 residues ( 84%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
3D viewing
Interactive 3D view in JSmol
For other options to view your downloaded structure offline see the FAQ

Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5vrhA_
100.0 24
PDB header:transferase
Chain: A: PDB Molecule:apolipoprotein n-acyltransferase;
PDBTitle: apolipoprotein n-acyltransferase c387s active site mutant
2c5n6mA_
100.0 24
PDB header:membrane protein
Chain: A: PDB Molecule:apolipoprotein n-acyltransferase;
PDBTitle: structure of the membrane integral lipoprotein n-acyltransferase lnt2 from p. aeruginosa
3c5mm1A_
100.0 38
PDB header:membrane protein
Chain: A: PDB Molecule:dolichol monophosphate mannose synthase;
PDBTitle: dolichyl phosphate mannose synthase in complex with gdp and dolichyl2 phosphate mannose
4c5h8lM_
100.0 20
PDB header:hydrolase
Chain: M: PDB Molecule:n-carbamoylputrescine amidohydrolase;
PDBTitle: crystal structure of medicago truncatula n-carbamoylputrescine2 amidohydrolase (mtcpa) c158s mutant in complex with putrescine
5d1uf5a_
100.0 18
Fold:Carbon-nitrogen hydrolase
Superfamily:Carbon-nitrogen hydrolase
Family:Carbamilase
6c2w1vA_
100.0 21
PDB header:hydrolase
Chain: A: PDB Molecule:nitrilase homolog 2;
PDBTitle: crystal structure of mouse nitrilase-2 at 1.4a resolution
7c6i00C_
100.0 21
PDB header:hydrolase
Chain: C: PDB Molecule:bifunctional nitrilase/nitrile hydratase nit4;
PDBTitle: cryo-em informed directed evolution of nitrilase 4 leads to a change2 in quaternary structure.
8c1xhbA_
100.0 17
PDB header:transferase
Chain: A: PDB Molecule:polypeptide n-acetylgalactosaminyltransferase 1;
PDBTitle: the crystal structure of udp-galnac: polypeptide alpha-n-2 acetylgalactosaminyltransferase-t1
9c6e4rB_
100.0 17
PDB header:transferase
Chain: B: PDB Molecule:polypeptide n-acetylgalactosaminyltransferase 9;
PDBTitle: crystal structure of the drosophila melanogaster polypeptide n-2 acetylgalactosaminyl transferase pgant9b
10c6iwqE_
100.0 16
PDB header:transferase
Chain: E: PDB Molecule:n-acetylgalactosaminyltransferase 7;
PDBTitle: crystal structure of galnac-t7 with mn2+
11d1f89a_
100.0 22
Fold:Carbon-nitrogen hydrolase
Superfamily:Carbon-nitrogen hydrolase
Family:Nitrilase
12c3wuyA_
100.0 20
PDB header:hydrolase
Chain: A: PDB Molecule:nitrilase;
PDBTitle: crystal structure of nit6803
13c5nqaA_
100.0 15
PDB header:transferase
Chain: A: PDB Molecule:polypeptide n-acetylgalactosaminyltransferase 4;
PDBTitle: crystal structure of galnac-t4 in complex with the monoglycopeptide 3
14c5ekeB_
100.0 22
PDB header:transferase
Chain: B: PDB Molecule:uncharacterized glycosyltransferase sll0501;
PDBTitle: structure of the polyisoprenyl-phosphate glycosyltransferase gtrb2 (f215a mutant)
15c2ffuA_
100.0 16
PDB header:transferase
Chain: A: PDB Molecule:polypeptide n-acetylgalactosaminyltransferase 2;
PDBTitle: crystal structure of human ppgalnact-2 complexed with udp and ea2
16d1emsa2
100.0 20
Fold:Carbon-nitrogen hydrolase
Superfamily:Carbon-nitrogen hydrolase
Family:Nitrilase
17c1emsB_
100.0 19
PDB header:antitumor protein
Chain: B: PDB Molecule:nit-fragile histidine triad fusion protein;
PDBTitle: crystal structure of the c. elegans nitfhit protein
18c5khaA_
100.0 17
PDB header:ligase
Chain: A: PDB Molecule:glutamine-dependent nad+ synthetase;
PDBTitle: structure of glutamine-dependent nad+ synthetase from acinetobacter2 baumannii in complex with adenosine diphosphate (adp)
19d1j31a_
100.0 20
Fold:Carbon-nitrogen hydrolase
Superfamily:Carbon-nitrogen hydrolase
Family:Carbamilase
20c2d7iA_
100.0 15
PDB header:transferase
Chain: A: PDB Molecule:polypeptide n-acetylgalactosaminyltransferase 10;
PDBTitle: crystal structure of pp-galnac-t10 with udp, galnac and mn2+
21c2plqA_
not modelled 100.0 22
PDB header:hydrolase
Chain: A: PDB Molecule:aliphatic amidase;
PDBTitle: crystal structure of the amidase from geobacillus pallidus rapc8
22c6mg6D_
not modelled 100.0 18
PDB header:hydrolase
Chain: D: PDB Molecule:carbon-nitrogen hydrolase;
PDBTitle: crystal structure of carbon-nitrogen hydrolase from helicobacter2 pylori g27
23c3hkxA_
not modelled 100.0 21
PDB header:hydrolase
Chain: A: PDB Molecule:amidase;
PDBTitle: crystal structure analysis of an amidase from nesterenkonia sp.
24c4hg3C_
not modelled 100.0 20
PDB header:hydrolase
Chain: C: PDB Molecule:probable hydrolase nit2;
PDBTitle: structural insights into yeast nit2: wild-type yeast nit2 in complex2 with alpha-ketoglutarate
25c2e11B_
not modelled 100.0 23
PDB header:hydrolase
Chain: B: PDB Molecule:hydrolase;
PDBTitle: the crystal structure of xc1258 from xanthomonas campestris: a cn-2 hydrolase superfamily protein with an arsenic adduct in the active3 site
26d1xhba2
not modelled 100.0 15
Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
27c2e2kC_
not modelled 100.0 16
PDB header:hydrolase
Chain: C: PDB Molecule:formamidase;
PDBTitle: helicobacter pylori formamidase amif contains a fine-tuned cysteine-2 glutamate-lysine catalytic triad
28c2z86D_
not modelled 100.0 16
PDB header:transferase
Chain: D: PDB Molecule:chondroitin synthase;
PDBTitle: crystal structure of chondroitin polymerase from escherichia coli2 strain k4 (k4cp) complexed with udp-glcua and udp
29c5tz8C_
not modelled 100.0 18
PDB header:transferase
Chain: C: PDB Molecule:glycosyl transferase;
PDBTitle: crystal structure of s. aureus tars
30c3ckvA_
not modelled 100.0 18
PDB header:unknown function
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of a mycobacterial protein
31c4f4hA_
not modelled 100.0 21
PDB header:ligase
Chain: A: PDB Molecule:glutamine dependent nad+ synthetase;
PDBTitle: crystal structure of a glutamine dependent nad+ synthetase from2 burkholderia thailandensis
32c3f1yC_
not modelled 100.0 17
PDB header:transferase
Chain: C: PDB Molecule:mannosyl-3-phosphoglycerate synthase;
PDBTitle: mannosyl-3-phosphoglycerate synthase from rubrobacter xylanophilus
33c2vhiG_
not modelled 100.0 21
PDB header:hydrolase
Chain: G: PDB Molecule:cg3027-pa;
PDBTitle: crystal structure of a pyrimidine degrading enzyme from2 drosophila melanogaster
34c3n05B_
not modelled 100.0 19
PDB header:ligase
Chain: B: PDB Molecule:nh(3)-dependent nad(+) synthetase;
PDBTitle: crystal structure of nh3-dependent nad+ synthetase from streptomyces2 avermitilis
35c2vhhA_
not modelled 100.0 20
PDB header:hydrolase
Chain: A: PDB Molecule:cg3027-pa;
PDBTitle: crystal structure of a pyrimidine degrading enzyme from2 drosophila melanogaster
36c4hg6A_
not modelled 100.0 17
PDB header:transferase
Chain: A: PDB Molecule:cellulose synthase subunit a;
PDBTitle: structure of a cellulose synthase - cellulose translocation2 intermediate
37c6h4mA_
not modelled 100.0 13
PDB header:transferase
Chain: A: PDB Molecule:probable ss-1,3-n-acetylglucosaminyltransferase;
PDBTitle: tarp-udp-glcnac-3rbop
38c4fixA_
not modelled 100.0 14
PDB header:transferase
Chain: A: PDB Molecule:udp-galactofuranosyl transferase glft2;
PDBTitle: crystal structure of glft2
39c6ftqA_
not modelled 100.0 19
PDB header:hydrolase
Chain: A: PDB Molecule:beta-ureidopropionase;
PDBTitle: crystal structure of human beta-ureidopropionase (beta-alanine2 synthase) - mutant t299c
40c3bcvA_
not modelled 100.0 19
PDB header:transferase
Chain: A: PDB Molecule:putative glycosyltransferase protein;
PDBTitle: crystal structure of a putative glycosyltransferase from bacteroides2 fragilis
41c5heaA_
not modelled 99.9 16
PDB header:transferase
Chain: A: PDB Molecule:putative glycosyltransferase (galt1);
PDBTitle: cgt structure in hexamer
42c3dlaD_
not modelled 99.9 18
PDB header:ligase
Chain: D: PDB Molecule:glutamine-dependent nad(+) synthetase;
PDBTitle: x-ray crystal structure of glutamine-dependent nad+ synthetase from2 mycobacterium tuberculosis bound to naad+ and don
43c3zf8A_
not modelled 99.9 8
PDB header:transferase
Chain: A: PDB Molecule:mannan polymerase complexes subunit mnn9;
PDBTitle: crystal structure of saccharomyces cerevisiae mnn9 in2 complex with gdp and mn.
44d1qg8a_
not modelled 99.9 15
Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:Spore coat polysaccharide biosynthesis protein SpsA
45d1omza_
not modelled 99.9 17
Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:Exostosin
46d2bo4a1
not modelled 99.9 20
Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:MGS-like
47c4cyyA_
not modelled 99.9 16
PDB header:hydrolase
Chain: A: PDB Molecule:pantetheinase;
PDBTitle: the structure of vanin-1: defining the link between metabolic disease,2 oxidative stress and inflammation
48c1omxB_
not modelled 99.9 16
PDB header:transferase
Chain: B: PDB Molecule:alpha-1,4-n-acetylhexosaminyltransferase extl2;
PDBTitle: crystal structure of mouse alpha-1,4-n-acetylhexosaminyltransferase2 (extl2)
49c3ilvA_
not modelled 99.9 19
PDB header:ligase
Chain: A: PDB Molecule:glutamine-dependent nad(+) synthetase;
PDBTitle: crystal structure of a glutamine-dependent nad(+) synthetase2 from cytophaga hutchinsonii
50c6p61D_
not modelled 99.9 18
PDB header:transferase
Chain: D: PDB Molecule:glycosyltransferase;
PDBTitle: structure of a glycosyltransferase from leptospira borgpetersenii2 serovar hardjo-bovis (strain jb197)
51c2qgiA_
not modelled 99.9 10
PDB header:transferase
Chain: A: PDB Molecule:atp synthase subunits region orf 6;
PDBTitle: the udp complex structure of the sixth gene product of the f1-atpase2 operon of rhodobacter blasticus
52c5hyyA_
not modelled 99.9 16
PDB header:hydrolase
Chain: A: PDB Molecule:nta1p;
PDBTitle: crystal structure of n-terminal amidase
53c5z8bB_
not modelled 99.8 9
PDB header:transferase
Chain: B: PDB Molecule:kfia protein;
PDBTitle: truncated n-acetylglucosaminyl transferase kfia from e. coli k5 strain2 apo form
54c5ggfC_
not modelled 99.7 16
PDB header:transferase, sugar binding protein
Chain: C: PDB Molecule:protein o-linked-mannose beta-1,2-n-
PDBTitle: crystal structure of human protein o-mannose beta-1,2-n-2 acetylglucosaminyltransferase form ii
55c4irqB_
not modelled 99.5 19
PDB header:transferase
Chain: B: PDB Molecule:beta-1,4-galactosyltransferase 7;
PDBTitle: crystal structure of catalytic domain of human beta1,2 4galactosyltransferase 7 in closed conformation in complex with3 manganese and udp
56d1pzta_
not modelled 99.4 20
Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:beta 1,4 galactosyltransferase (b4GalT1)
57c3lw6A_
not modelled 98.9 17
PDB header:transferase
Chain: A: PDB Molecule:beta-4-galactosyltransferase 7;
PDBTitle: crystal structure of drosophila beta1,4-galactosyltransferase-7
58c2wvmA_
not modelled 98.6 19
PDB header:transferase
Chain: A: PDB Molecule:mannosyl-3-phosphoglycerate synthase;
PDBTitle: h309a mutant of mannosyl-3-phosphoglycerate synthase from2 thermus thermophilus hb27 in complex with3 gdp-alpha-d-mannose and mg(ii)
59c2zu8A_
not modelled 98.5 17
PDB header:transferase
Chain: A: PDB Molecule:mannosyl-3-phosphoglycerate synthase;
PDBTitle: crystal structure of mannosyl-3-phosphoglycerate synthase2 from pyrococcus horikoshii
60c6fxyA_
not modelled 98.2 13
PDB header:transferase
Chain: A: PDB Molecule:procollagen-lysine,2-oxoglutarate 5-dioxygenase 3;
PDBTitle: crystal structure of full-length human lysyl hydroxylase lh3 -2 cocrystal with fe2+, mn2+, udp-gal - structure from long-wavelength3 s-sad
61d1fo8a_
not modelled 98.0 18
Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:N-acetylglucosaminyltransferase I
62d1vh3a_
not modelled 97.3 12
Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:Cytidylytransferase
63d3cu0a1
not modelled 97.0 20
Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:1,3-glucuronyltransferase
64c2d0jD_
not modelled 96.8 27
PDB header:transferase
Chain: D: PDB Molecule:galactosylgalactosylxylosylprotein 3-beta-
PDBTitle: crystal structure of human glcat-s apo form
65c5vcmA_
not modelled 96.8 19
PDB header:transferase
Chain: A: PDB Molecule:alpha-1,6-mannosyl-glycoprotein 2-beta-n-
PDBTitle: alpha-1,6-mannosyl-glycoprotein 2-beta-n-acetylglucosaminyltransferase2 with bound udp and manganese
66c4kt7A_
not modelled 96.5 10
PDB header:transferase
Chain: A: PDB Molecule:2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase;
PDBTitle: the crystal structure of 4-diphosphocytidyl-2c-methyl-d-2 erythritolsynthase from anaerococcus prevotii dsm 20548
67d1v82a_
not modelled 96.4 22
Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:1,3-glucuronyltransferase
68c3cgxA_
not modelled 96.1 17
PDB header:transferase
Chain: A: PDB Molecule:putative nucleotide-diphospho-sugar transferase;
PDBTitle: crystal structure of putative nucleotide-diphospho-sugar transferase2 (yp_389115.1) from desulfovibrio desulfuricans g20 at 1.90 a3 resolution
69c6b5kA_
not modelled 95.9 15
PDB header:transferase
Chain: A: PDB Molecule:glucose-1-phosphate thymidylyltransferase;
PDBTitle: mycobacterium tuberculosis rmla in complex with mg/dttp
70d1iina_
not modelled 95.7 12
Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:glucose-1-phosphate thymidylyltransferase
71c4ys8B_
not modelled 95.0 19
PDB header:transferase
Chain: B: PDB Molecule:2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase;
PDBTitle: crystal structure of 2-c-methyl-d-erythritol 4-phosphate2 cytidylyltransferase (ispd) from burkholderia thailandensis
72d1h5ra_
not modelled 94.9 12
Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:glucose-1-phosphate thymidylyltransferase
73c6bwhB_
not modelled 94.9 11
PDB header:transferase
Chain: B: PDB Molecule:2-phospho-l-lactate guanylyltransferase;
PDBTitle: crystal structure of mycoibacterium tuberculosis rv2983 in complex2 with pep
74c3foqA_
not modelled 94.8 19
PDB header:transferase
Chain: A: PDB Molecule:bifunctional protein glmu;
PDBTitle: crystal structure of n-acetylglucosamine-1-phosphate2 uridyltransferase (glmu) from mycobacterium tuberculosis in3 a cubic space group.
75c5ddtA_
not modelled 94.8 10
PDB header:transferase
Chain: A: PDB Molecule:2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase;
PDBTitle: crystal structure of ispd from bacillus subtilis at 1.80 angstroms2 resolution, crystal form i
76d1i52a_
not modelled 94.5 15
Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:Cytidylytransferase
77d1fxoa_
not modelled 94.5 12
Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:glucose-1-phosphate thymidylyltransferase
78d1mc3a_
not modelled 94.5 11
Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:glucose-1-phosphate thymidylyltransferase
79c3d5nB_
not modelled 94.0 9
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:q97w15_sulso;
PDBTitle: crystal structure of the q97w15_sulso protein from sulfolobus2 solfataricus. nesg target ssr125.
80c3d8vA_
not modelled 93.9 19
PDB header:transferase
Chain: A: PDB Molecule:bifunctional protein glmu;
PDBTitle: crystal structure of glmu from mycobacterium tuberculosis2 in complex with uridine-diphosphate-n-acetylglucosamine
81c3okrA_
not modelled 93.7 14
PDB header:transferase
Chain: A: PDB Molecule:2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase;
PDBTitle: structure of mtb apo 2-c-methyl-d-erythritol 4-phosphate2 cytidyltransferase (ispd)
82d1w77a1
not modelled 93.6 10
Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:Cytidylytransferase
83d1lvwa_
not modelled 93.5 13
Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:glucose-1-phosphate thymidylyltransferase
84c2xwlB_
not modelled 93.3 14
PDB header:transferase
Chain: B: PDB Molecule:2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase;
PDBTitle: crystal structure of ispd from mycobacterium smegmatis in complex with2 ctp and mg
85d1vpaa_
not modelled 92.8 5
Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:Cytidylytransferase
86c6oewB_
not modelled 92.8 15
PDB header:transferase
Chain: B: PDB Molecule:cytidylyltransferase;
PDBTitle: structure of a cytidylyltransferase from leptospira borgpetersenii2 serovar hardjo-bovis (strain jb197)
87c4jisB_
not modelled 92.7 10
PDB header:transferase
Chain: B: PDB Molecule:ribitol-5-phosphate cytidylyltransferase;
PDBTitle: crystal structure of ribitol 5-phosphate cytidylyltransferase (tari)2 from bacillus subtilis
88c2px7A_
not modelled 92.4 17
PDB header:transferase
Chain: A: PDB Molecule:2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase;
PDBTitle: crystal structure of 2-c-methyl-d-erythritol 4-phosphate2 cytidylyltransferase from thermus thermophilus hb8
89c3d98A_
not modelled 92.2 18
PDB header:transferase
Chain: A: PDB Molecule:bifunctional protein glmu;
PDBTitle: crystal structure of glmu from mycobacterium tuberculosis, ligand-free2 form
90d2oi6a2
not modelled 91.9 15
Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:UDP-glucose pyrophosphorylase
91d1w55a1
not modelled 91.6 10
Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:Cytidylytransferase
92c2wawA_
not modelled 91.4 6
PDB header:unknown function
Chain: A: PDB Molecule:moba relate protein;
PDBTitle: crystal structure of mycobacterium tuberculosis rv0371c2 homolog from mycobacterium sp. strain jc1
93d1yp2a2
not modelled 91.2 8
Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:glucose-1-phosphate thymidylyltransferase
94c1w57A_
not modelled 91.0 7
PDB header:transferase
Chain: A: PDB Molecule:ispd/ispf bifunctional enzyme;
PDBTitle: structure of the bifunctional ispdf from campylobacter2 jejuni containing zn
95c3oamD_
not modelled 90.9 18
PDB header:transferase
Chain: D: PDB Molecule:3-deoxy-manno-octulosonate cytidylyltransferase;
PDBTitle: crystal structure of cytidylyltransferase from vibrio cholerae
96c2cu2A_
not modelled 90.0 23
PDB header:transferase
Chain: A: PDB Molecule:putative mannose-1-phosphate guanylyl transferase;
PDBTitle: crystal structure of mannose-1-phosphate geranyltransferase from2 thermus thermophilus hb8
97d1vgwa_
not modelled 89.2 16
Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:Cytidylytransferase
98c4xwiA_
not modelled 88.9 14
PDB header:transferase
Chain: A: PDB Molecule:3-deoxy-manno-octulosonate cytidylyltransferase;
PDBTitle: x-ray crystal structure of cmp-kdo synthase from pseudomonas2 aeruginosa
99c2pa4B_
not modelled 88.4 13
PDB header:transferase
Chain: B: PDB Molecule:utp-glucose-1-phosphate uridylyltransferase;
PDBTitle: crystal structure of udp-glucose pyrophosphorylase from corynebacteria2 glutamicum in complex with magnesium and udp-glucose
100c5xhwA_
not modelled 88.3 10
PDB header:transferase
Chain: A: PDB Molecule:putative 6-deoxy-d-mannoheptose pathway protein;
PDBTitle: crystal structure of hddc from yersinia pseudotuberculosis
101d1vkpa_
not modelled 87.0 19
Fold:Pentein, beta/alpha-propeller
Superfamily:Pentein
Family:Porphyromonas-type peptidylarginine deiminase
102c5vcsB_
not modelled 86.9 19
PDB header:transferase
Chain: B: PDB Molecule:alpha-1,6-mannosyl-glycoprotein 2-beta-n-
PDBTitle: alpha-1,6-mannosyl-glycoprotein 2-beta-n-acetylglucosaminyltransferase2 with bound acceptor
103d2cu2a2
not modelled 86.8 23
Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:mannose-1-phosphate guanylyl transferase
104c3okrC_
not modelled 86.7 17
PDB header:transferase
Chain: C: PDB Molecule:2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase;
PDBTitle: structure of mtb apo 2-c-methyl-d-erythritol 4-phosphate2 cytidyltransferase (ispd)
105c5i1fA_
not modelled 86.6 13
PDB header:transferase
Chain: A: PDB Molecule:utp--glucose-1-phosphate uridylyltransferase;
PDBTitle: crystal structure of utp-glucose-1-phosphate uridylyltransferase from2 burkholderia vietnamiensis in complex with uridine-5'-diphosphate-3 glucose
106c4mndA_
not modelled 86.5 9
PDB header:transferase
Chain: A: PDB Molecule:ctp l-myo-inositol-1-phosphate cytidylyltransferase/cdp-l-
PDBTitle: crystal structure of archaeoglobus fulgidus ipct-dipps bifunctional2 membrane protein
107c3brkX_
not modelled 85.5 11
PDB header:transferase
Chain: X: PDB Molecule:glucose-1-phosphate adenylyltransferase;
PDBTitle: crystal structure of adp-glucose pyrophosphorylase from agrobacterium2 tumefaciens
108c2qkxA_
not modelled 84.9 18
PDB header:transferase
Chain: A: PDB Molecule:bifunctional protein glmu;
PDBTitle: n-acetyl glucosamine 1-phosphate uridyltransferase from mycobacterium2 tuberculosis complex with n-acetyl glucosamine 1-phosphate
109d1e5ka_
not modelled 84.4 16
Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:Molybdenum cofactor biosynthesis protein MobA
110c2vshB_
not modelled 84.3 13
PDB header:transferase
Chain: B: PDB Molecule:2-c-methyl-d-erythritol 4-phosphate
PDBTitle: synthesis of cdp-activated ribitol for teichoic acid2 precursors in streptococcus pneumoniae
111c2c0nA_
not modelled 84.3 16
PDB header:viral protein/transferase
Chain: A: PDB Molecule:a197;
PDBTitle: crystal structure of a197 from stiv
112c4ytgA_
not modelled 84.0 17
PDB header:hydrolase
Chain: A: PDB Molecule:peptidylarginine deiminase;
PDBTitle: crystal structure of porphyromonas gingivalis peptidylarginine2 deiminase (ppad) mutant c351a in complex with dipeptide met-arg.
113c5gvvF_
not modelled 83.2 9
PDB header:transferase
Chain: F: PDB Molecule:glycosyl transferase family 8;
PDBTitle: crystal structure of the glycosyltransferase glye in streptococcus2 pneumoniae tigr4
114c2j0bA_
not modelled 81.8 19
PDB header:transferase
Chain: A: PDB Molecule:beta-1,3-n-acetylglucosaminyltransferase manic fringe;
PDBTitle: structure of the catalytic domain of mouse manic fringe in2 complex with udp and manganese
115c2qh5B_
not modelled 81.2 9
PDB header:isomerase
Chain: B: PDB Molecule:mannose-6-phosphate isomerase;
PDBTitle: crystal structure of mannose-6-phosphate isomerase from helicobacter2 pylori
116c2x5sB_
not modelled 80.1 14
PDB header:transferase
Chain: B: PDB Molecule:mannose-1-phosphate guanylyltransferase;
PDBTitle: crystal structure of t. maritima gdp-mannose2 pyrophosphorylase in apo state.
117c3polA_
not modelled 80.1 10
PDB header:transferase
Chain: A: PDB Molecule:3-deoxy-manno-octulosonate cytidylyltransferase;
PDBTitle: 2.3 angstrom crystal structure of 3-deoxy-manno-octulosonate2 cytidylyltransferase (kdsb) from acinetobacter baumannii.
118c3tqdA_
not modelled 79.5 11
PDB header:transferase
Chain: A: PDB Molecule:3-deoxy-manno-octulosonate cytidylyltransferase;
PDBTitle: structure of the 3-deoxy-d-manno-octulosonate cytidylyltransferase2 (kdsb) from coxiella burnetii
119d1sgva1
not modelled 77.1 23
Fold:PUA domain-like
Superfamily:PUA domain-like
Family:PUA domain
120c2gamA_
not modelled 77.0 13
PDB header:transferase
Chain: A: PDB Molecule:beta-1,6-n-acetylglucosaminyltransferase;
PDBTitle: x-ray crystal structure of murine leukocyte-type core 2 b1,6-n-2 acetylglucosaminyltransferase (c2gnt-l) in complex with galb1,3galnac

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below