Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2270_(lppN)_2544708_2545235
DateMon Aug 5 13:25:41 BST 2019
Unique Job IDd70ef33ed58be786
SequenceMRLPGRHVLY ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:45.773 Y:37.207 Z:22.499
Model (left) based on template d2cwza1
Top template information
Fold:Thioesterase/thiol ester dehydrase-isomerase
Superfamily:Thioesterase/thiol ester dehydrase-isomerase
Family:TTHA0967-like
Confidence and coverage
Confidence: 31.1% Coverage: 33%
57 residues ( 33% of your sequence) have been modelled with 31.1% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
Please note: You must be registered and logged in to use Phyrealarm.
3D viewing
Interactive 3D view in JSmol
For other options to view your downloaded structure offline see the FAQ

Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d2cwza1



31.1 11
Fold:Thioesterase/thiol ester dehydrase-isomerase
Superfamily:Thioesterase/thiol ester dehydrase-isomerase
Family:TTHA0967-like
2c6czhB_



16.2 18
PDB header:de novo protein
Chain: B: PDB Molecule:mfap0;
PDBTitle: structure of a redesigned beta barrel, mfap0, bound to dfhbi
3c5ue8B_



9.0 38
PDB header:exocytosis
Chain: B: PDB Molecule:protein unc-13 homolog a;
PDBTitle: the crystal structure of munc13-1 c1c2bmun domain
4c3izcW_



7.7 22
PDB header:ribosome
Chain: W: PDB Molecule:60s ribosomal protein rpl22 (l22e);
PDBTitle: localization of the large subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome
5c3j39U_



6.9 22
PDB header:ribosome
Chain: U: PDB Molecule:60s ribosomal protein l22;
PDBTitle: structure of the d. melanogaster 60s ribosomal proteins
6c3iz5W_



6.7 22
PDB header:ribosome
Chain: W: PDB Molecule:60s ribosomal protein l22 (l22e);
PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
7c6dmmB_



5.6 56
PDB header:antimicrobial protein
Chain: B: PDB Molecule:neutrophil defensin 4;
PDBTitle: crystal structure of the g23a mutant of human alpha defensin hnp4.
8c6dmmF_



5.6 56
PDB header:antimicrobial protein
Chain: F: PDB Molecule:neutrophil defensin 4;
PDBTitle: crystal structure of the g23a mutant of human alpha defensin hnp4.
9c6dmmG_



5.6 56
PDB header:antimicrobial protein
Chain: G: PDB Molecule:neutrophil defensin 4;
PDBTitle: crystal structure of the g23a mutant of human alpha defensin hnp4.
10c6dmmD_



5.6 56
PDB header:antimicrobial protein
Chain: D: PDB Molecule:neutrophil defensin 4;
PDBTitle: crystal structure of the g23a mutant of human alpha defensin hnp4.
11c6dmqG_



5.6 56
PDB header:antimicrobial protein
Chain: G: PDB Molecule:neutrophil defensin 4;
PDBTitle: crystal structure of the t27a mutant of human alpha defensin hnp4.
12c6dmqE_



5.6 56
PDB header:antimicrobial protein
Chain: E: PDB Molecule:neutrophil defensin 4;
PDBTitle: crystal structure of the t27a mutant of human alpha defensin hnp4.
13c6dmqC_



5.6 56
PDB header:antimicrobial protein
Chain: C: PDB Molecule:neutrophil defensin 4;
PDBTitle: crystal structure of the t27a mutant of human alpha defensin hnp4.
14c6dmqH_



5.6 56
PDB header:antimicrobial protein
Chain: H: PDB Molecule:neutrophil defensin 4;
PDBTitle: crystal structure of the t27a mutant of human alpha defensin hnp4.
15c1zmmC_



5.5 56
PDB header:antimicrobial protein
Chain: C: PDB Molecule:neutrophil defensin 4;
PDBTitle: crystal structure of human alpha-defensin-4
16c1zmmA_



5.5 56
PDB header:antimicrobial protein
Chain: A: PDB Molecule:neutrophil defensin 4;
PDBTitle: crystal structure of human alpha-defensin-4
17c2oqjL_



5.4 31
PDB header:immune system
Chain: L: PDB Molecule:peptide 2g12.1 (acppshvldmrsgtclaaegk);
PDBTitle: crystal structure analysis of fab 2g12 in complex with peptide 2g12.1
18c6dmmH_



5.3 56
PDB header:antimicrobial protein
Chain: H: PDB Molecule:neutrophil defensin 4;
PDBTitle: crystal structure of the g23a mutant of human alpha defensin hnp4.
19c6dmmI_



5.3 56
PDB header:antimicrobial protein
Chain: I: PDB Molecule:neutrophil defensin 4;
PDBTitle: crystal structure of the g23a mutant of human alpha defensin hnp4.
20c6dmmL_



5.3 56
PDB header:antimicrobial protein
Chain: L: PDB Molecule:neutrophil defensin 4;
PDBTitle: crystal structure of the g23a mutant of human alpha defensin hnp4.
21c6dmmK_



not modelled 5.3 56
PDB header:antimicrobial protein
Chain: K: PDB Molecule:neutrophil defensin 4;
PDBTitle: crystal structure of the g23a mutant of human alpha defensin hnp4.
22c6dmqA_



not modelled 5.2 56
PDB header:antimicrobial protein
Chain: A: PDB Molecule:neutrophil defensin 4;
PDBTitle: crystal structure of the t27a mutant of human alpha defensin hnp4.
23c6dmqB_



not modelled 5.2 56
PDB header:antimicrobial protein
Chain: B: PDB Molecule:neutrophil defensin 4;
PDBTitle: crystal structure of the t27a mutant of human alpha defensin hnp4.
24c6dmqF_



not modelled 5.2 56
PDB header:antimicrobial protein
Chain: F: PDB Molecule:neutrophil defensin 4;
PDBTitle: crystal structure of the t27a mutant of human alpha defensin hnp4.
25c1zmmB_



not modelled 5.2 56
PDB header:antimicrobial protein
Chain: B: PDB Molecule:neutrophil defensin 4;
PDBTitle: crystal structure of human alpha-defensin-4
26c6dmmE_



not modelled 5.1 56
PDB header:antimicrobial protein
Chain: E: PDB Molecule:neutrophil defensin 4;
PDBTitle: crystal structure of the g23a mutant of human alpha defensin hnp4.
27c6dmmC_



not modelled 5.1 56
PDB header:antimicrobial protein
Chain: C: PDB Molecule:neutrophil defensin 4;
PDBTitle: crystal structure of the g23a mutant of human alpha defensin hnp4.
28c6dmmA_



not modelled 5.1 56
PDB header:antimicrobial protein
Chain: A: PDB Molecule:neutrophil defensin 4;
PDBTitle: crystal structure of the g23a mutant of human alpha defensin hnp4.
29c6dmmJ_



not modelled 5.1 56
PDB header:antimicrobial protein
Chain: J: PDB Molecule:neutrophil defensin 4;
PDBTitle: crystal structure of the g23a mutant of human alpha defensin hnp4.
30c6dmqD_



not modelled 5.1 56
PDB header:antimicrobial protein
Chain: D: PDB Molecule:neutrophil defensin 4;
PDBTitle: crystal structure of the t27a mutant of human alpha defensin hnp4.
31c1zmmD_



not modelled 5.1 56
PDB header:antimicrobial protein
Chain: D: PDB Molecule:neutrophil defensin 4;
PDBTitle: crystal structure of human alpha-defensin-4

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite