Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2612c_(pgsA1)_2939969_2940622
DateWed Aug 7 12:50:25 BST 2019
Unique Job ID88acd89247079527
SequenceMSKLPFLSRA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:52.223 Y:60.813 Z:36.268
Model (left) based on template c6h59B_
Top template information
PDB header:transferase
Chain: B: PDB Molecule:cdp-diacylglycerol--inositol 3-phosphatidyltransferase;
PDBTitle: crystal structure of mycobacterium tuberculosis phosphatidylinositol2 phosphate synthase (pgsa1) with cdp-dag bound
Confidence and coverage
Confidence:100.0% Coverage: 90%
196 residues ( 90% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c6h59B_



100.0 100
PDB header:transferase
Chain: B: PDB Molecule:cdp-diacylglycerol--inositol 3-phosphatidyltransferase;
PDBTitle: crystal structure of mycobacterium tuberculosis phosphatidylinositol2 phosphate synthase (pgsa1) with cdp-dag bound
2c5d92B_



100.0 43
PDB header:membrane protein
Chain: B: PDB Molecule:af2299 protein,phosphatidylinositol synthase;
PDBTitle: structure of a phosphatidylinositolphosphate (pip) synthase from2 renibacterium salmoninarum
3c4o6mA_



100.0 22
PDB header:transferase
Chain: A: PDB Molecule:af2299, a cdp-alcohol phosphotransferase;
PDBTitle: structure of af2299, a cdp-alcohol phosphotransferase (cmp-bound)
4c4mndA_



99.9 18
PDB header:transferase
Chain: A: PDB Molecule:ctp l-myo-inositol-1-phosphate cytidylyltransferase/cdp-l-
PDBTitle: crystal structure of archaeoglobus fulgidus ipct-dipps bifunctional2 membrane protein
5c2voyG_



52.3 17
PDB header:hydrolase
Chain: G: PDB Molecule:sarcoplasmic/endoplasmic reticulum calcium atpase 1;
PDBTitle: cryoem model of copa, the copper transporting atpase from2 archaeoglobus fulgidus
6c5gufA_



26.3 14
PDB header:transferase
Chain: A: PDB Molecule:cdp-archaeol synthase;
PDBTitle: structural insight into an intramembrane enzyme for archaeal membrane2 lipids biosynthesis
7c5zc2B_



25.4 13
PDB header:flavoprotein
Chain: B: PDB Molecule:p-hydroxyphenylacetate 3-hydroxylase, reductase component;
PDBTitle: acinetobacter baumannii p-hydroxyphenylacetate 3-hydroxylase (hpah),2 reductase component (c1)
8d1ou8a_



22.6 31
Fold:SspB-like
Superfamily:SspB-like
Family:Stringent starvation protein B, SspB
9d1zszc1



22.2 19
Fold:SspB-like
Superfamily:SspB-like
Family:Stringent starvation protein B, SspB
10d1ou9a_



20.1 31
Fold:SspB-like
Superfamily:SspB-like
Family:Stringent starvation protein B, SspB
11c2rkhA_



19.1 29
PDB header:transcription
Chain: A: PDB Molecule:putative apha-like transcription factor;
PDBTitle: crystal structure of a putative apha-like transcription factor2 (zp_00208345.1) from magnetospirillum magnetotacticum ms-1 at 2.00 a3 resolution
12d1yfna1



18.2 25
Fold:SspB-like
Superfamily:SspB-like
Family:Stringent starvation protein B, SspB
13c6mjbC_



16.0 28
PDB header:cell cycle
Chain: C: PDB Molecule:kinetochore-associated protein dsn1;
PDBTitle: structure of candida glabrata csm1:dsn1(14-72) complex
14c3cjnA_



13.0 16
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of transcriptional regulator, marr family, from2 silicibacter pomeroyi
15c6c28C_



12.0 21
PDB header:dna binding protein
Chain: C: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: transcriptional repressor, cour, bound to p-coumaroyl-coa
16c3cdhB_



11.5 16
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of the marr family transcriptional regulator spo14532 from silicibacter pomeroyi dss-3
17d2fbha1



10.3 16
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
18c4n3xD_



9.8 64
PDB header:endocytosis
Chain: D: PDB Molecule:rab5 gdp/gtp exchange factor;
PDBTitle: crystal structure of rabex-5 cc domain
19c2zxqA_



9.6 21
PDB header:hydrolase
Chain: A: PDB Molecule:endo-alpha-n-acetylgalactosaminidase;
PDBTitle: crystal structure of endo-alpha-n-acetylgalactosaminidase2 from bifidobacterium longum (engbf)
20c3ecqA_



9.2 32
PDB header:hydrolase
Chain: A: PDB Molecule:endo-alpha-n-acetylgalactosaminidase;
PDBTitle: endo-alpha-n-acetylgalactosaminidase from streptococcus pneumoniae:2 semet structure
21c4i0xJ_



not modelled 8.5 22
PDB header:structural genomics, unknown function
Chain: J: PDB Molecule:esat-6-like protein mab_3113;
PDBTitle: crystal structure of the mycobacterum abscessus esxef (mab_3112-2 mab_3113) complex
22c3bj6B_



not modelled 6.8 29
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of marr family transcription regulator sp03579
23d1bvp11



not modelled 6.7 29
Fold:A virus capsid protein alpha-helical domain
Superfamily:A virus capsid protein alpha-helical domain
Family:Orbivirus capsid
24c3hrmA_



not modelled 5.9 22
PDB header:transcription regulator
Chain: A: PDB Molecule:hth-type transcriptional regulator sarz;
PDBTitle: crystal structure of staphylococcus aureus protein sarz in sulfenic2 acid form
25c2le7A_



not modelled 5.6 29
PDB header:transport protein
Chain: A: PDB Molecule:potassium voltage-gated channel subfamily h member 2;
PDBTitle: solution nmr structure of the s4s5 linker of herg potassium channel
26c3ecoB_



not modelled 5.4 16
PDB header:transcription
Chain: B: PDB Molecule:mepr;
PDBTitle: crystal structure of mepr, a transcription regulator of the2 staphylococcus aureus multidrug efflux pump mepa
27c3oopA_



not modelled 5.4 13
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:lin2960 protein;
PDBTitle: the structure of a protein with unknown function from listeria innocua2 clip11262

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below