Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2788_(sirR)_3096969_3097655
DateWed Aug 7 12:50:45 BST 2019
Unique Job IDa315b62e748b1ef5
SequenceVRADEEPGDL ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:42.538 Y:51.289 Z:56.036
Model (left) based on template c5cviB_
Top template information
PDB header:transcription regulator
Chain: B: PDB Molecule:slor;
PDBTitle: structure of the manganese regulator slor
Confidence and coverage
Confidence:100.0% Coverage: 93%
212 residues ( 93% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5cviB_
100.0 34
PDB header:transcription regulator
Chain: B: PDB Molecule:slor;
PDBTitle: structure of the manganese regulator slor
2c3hruA_
100.0 33
PDB header:transcription
Chain: A: PDB Molecule:metalloregulator scar;
PDBTitle: crystal structure of scar with bound zn2+
3c4o6jA_
100.0 25
PDB header:metal binding protein
Chain: A: PDB Molecule:iron-dependent transcription repressor related protein;
PDBTitle: crystal sturucture of t. acidophilum ider
4c1g3wA_
100.0 27
PDB header:gene regulation
Chain: A: PDB Molecule:diphtheria toxin repressor;
PDBTitle: cd-cys102ser dtxr
5c1fx7C_
100.0 26
PDB header:signaling protein
Chain: C: PDB Molecule:iron-dependent repressor ider;
PDBTitle: crystal structure of the iron-dependent regulator (ider) from2 mycobacterium tuberculosis
6c6o5cB_
100.0 32
PDB header:dna binding protein
Chain: B: PDB Molecule:putative metal-dependent transcriptional regulator;
PDBTitle: x-ray crystal structure of metal-dependent transcriptional regulator2 mtsr
7c5zr4B_
100.0 94
PDB header:transcription
Chain: B: PDB Molecule:metal-dependent transcriptional regulator;
PDBTitle: manganese-dependent transcriptional repressor
8c2it0A_
100.0 32
PDB header:transcription/dna
Chain: A: PDB Molecule:iron-dependent repressor ider;
PDBTitle: crystal structure of a two-domain ider-dna complex crystal2 form ii
9c2x4hA_
100.0 26
PDB header:transcription
Chain: A: PDB Molecule:hypothetical protein sso2273;
PDBTitle: crystal structure of the hypothetical protein sso2273 from2 sulfolobus solfataricus
10c2ev5B_
100.0 24
PDB header:transcription
Chain: B: PDB Molecule:transcriptional regulator mntr;
PDBTitle: bacillus subtilis manganese transport regulator (mntr)2 bound to calcium
11c1f5tA_
99.9 32
PDB header:transcription/dna
Chain: A: PDB Molecule:diphtheria toxin repressor;
PDBTitle: diphtheria tox repressor (c102d mutant) complexed with2 nickel and dtxr consensus binding sequence
12c2h09A_
99.9 27
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator mntr;
PDBTitle: crystal structure of diphtheria toxin repressor like protein2 from e. coli
13d1g3wa2
99.8 42
Fold:Iron-dependent repressor protein, dimerization domain
Superfamily:Iron-dependent repressor protein, dimerization domain
Family:Iron-dependent repressor protein, dimerization domain
14d2isya2
99.8 43
Fold:Iron-dependent repressor protein, dimerization domain
Superfamily:Iron-dependent repressor protein, dimerization domain
Family:Iron-dependent repressor protein, dimerization domain
15c1qw1A_
99.7 23
PDB header:gene regulation
Chain: A: PDB Molecule:diphtheria toxin repressor;
PDBTitle: solution structure of the c-terminal domain of dtxr2 residues 110-226
16d2fxaa1
99.5 21
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
17d2ev0a2
99.5 29
Fold:Iron-dependent repressor protein, dimerization domain
Superfamily:Iron-dependent repressor protein, dimerization domain
Family:Iron-dependent repressor protein, dimerization domain
18d2isya1
99.4 23
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Iron-dependent repressor protein
19d1g3wa1
99.4 23
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Iron-dependent repressor protein
20d1f5ta2
99.4 40
Fold:Iron-dependent repressor protein, dimerization domain
Superfamily:Iron-dependent repressor protein, dimerization domain
Family:Iron-dependent repressor protein, dimerization domain
21c2k4yA_
not modelled 99.3 16
PDB header:metal transport
Chain: A: PDB Molecule:feoa-like protein;
PDBTitle: nmr structure of feoa-like protein from clostridium2 acetobutylicum: northeast structural genomics consortium3 target car178
22c2k5fA_
not modelled 99.3 24
PDB header:metal transport
Chain: A: PDB Molecule:ferrous iron transport protein a;
PDBTitle: solution nmr structure of feoa protein from chlorobium2 tepidum. northeast structural genomics consortium target3 ctr121
23c2k5lA_
not modelled 99.3 19
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:feoa;
PDBTitle: solution nmr structure of protein feoa from clostridium2 thermocellum, northeast structural genomics consortium3 target cmr17
24c2k5iA_
not modelled 99.3 14
PDB header:metal transport
Chain: A: PDB Molecule:iron transport protein;
PDBTitle: solution structure of iron(ii) transport protein a from2 clostridium thermocellum , northeast structural genomics3 consortium (nesg) target vr131
25d2h3ja1
not modelled 99.1 17
Fold:SH3-like barrel
Superfamily:C-terminal domain of transcriptional repressors
Family:FeoA-like
26d2ev0a1
not modelled 99.1 19
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Iron-dependent repressor protein
27c3e19D_
not modelled 99.1 25
PDB header:transcription regulator, metal binding p
Chain: D: PDB Molecule:feoa;
PDBTitle: crystal structure of iron uptake regulatory protein (feoa) solved by2 sulfur sad in a monoclinic space group
28c2fxaB_
not modelled 99.1 21
PDB header:transcription
Chain: B: PDB Molecule:protease production regulatory protein hpr;
PDBTitle: structure of the protease production regulatory protein hpr from2 bacillus subtilis.
29c3mhxB_
not modelled 99.1 14
PDB header:metal transport
Chain: B: PDB Molecule:putative ferrous iron transport protein a;
PDBTitle: crystal structure of stenotrophomonas maltophilia feoa complexed with2 zinc: a unique procaryotic sh3 domain protein possibly acting as a3 bacterial ferrous iron transport activating factor
30d2gcxa1
not modelled 98.9 13
Fold:SH3-like barrel
Superfamily:C-terminal domain of transcriptional repressors
Family:FeoA-like
31c5jlsA_
not modelled 98.9 19
PDB header:transcription
Chain: A: PDB Molecule:adhesin competence repressor;
PDBTitle: crystal structure of adhesin competence repressor (adcr) from2 streptococcus pyogenes (c-terminally his tagged)
32d2hr3a1
not modelled 98.9 17
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
33c4yifE_
not modelled 98.9 19
PDB header:dna binding protein
Chain: E: PDB Molecule:marr family protein rv0880;
PDBTitle: crystal structure of rv0880
34c3nqoB_
not modelled 98.8 19
PDB header:transcription
Chain: B: PDB Molecule:marr-family transcriptional regulator;
PDBTitle: crystal structure of a marr family transcriptional regulator (cd1569)2 from clostridium difficile 630 at 2.20 a resolution
35d3broa1
not modelled 98.8 15
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
36c3nrvC_
not modelled 98.8 17
PDB header:transcription regulator
Chain: C: PDB Molecule:putative transcriptional regulator (marr/emrr family);
PDBTitle: crystal structure of marr/emrr family transcriptional regulator from2 acinetobacter sp. adp1
37c6jbxB_
not modelled 98.8 19
PDB header:transcription/dna
Chain: B: PDB Molecule:fatty acid biosynthesis transcriptional regulator;
PDBTitle: crystal structure of streptococcus pneumoniae fabt in complex with dna
38c4mnuA_
not modelled 98.8 19
PDB header:transcription regulator
Chain: A: PDB Molecule:slya-like transcription regulator;
PDBTitle: crystal structure of uncharacterized slya-like transcription regulator2 from listeria monocytogenes
39c3zplE_
not modelled 98.8 17
PDB header:transcription/dna
Chain: E: PDB Molecule:putative marr-family transcriptional repressor;
PDBTitle: crystal structure of sco3205, a marr family transcriptional regulator2 from streptomyces coelicolor, in complex with dna
40c3bjaA_
not modelled 98.8 23
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator, marr family, putative;
PDBTitle: crystal structure of putative marr-like transcription regulator2 (np_978771.1) from bacillus cereus atcc 10987 at 2.38 a resolution
41d2fbha1
not modelled 98.8 21
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
42c3zmdD_
not modelled 98.8 19
PDB header:transcription
Chain: D: PDB Molecule:putative transcriptional regulator;
PDBTitle: crystal structure of absc, a marr family transcriptional2 regulator from streptomyces coelicolor
43c3bj6B_
not modelled 98.8 14
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of marr family transcription regulator sp03579
44c5yhxH_
not modelled 98.8 17
PDB header:metal binding protein
Chain: H: PDB Molecule:zinc transport transcriptional regulator;
PDBTitle: structure of lactococcus lactis zitr, wild type
45c2gxgA_
not modelled 98.7 23
PDB header:transcription
Chain: A: PDB Molecule:146aa long hypothetical transcriptional regulator;
PDBTitle: crystal structure of emrr homolog from hyperthermophilic archaea2 sulfolobus tokodaii strain7
46c2nnnB_
not modelled 98.7 17
PDB header:transcription
Chain: B: PDB Molecule:probable transcriptional regulator;
PDBTitle: crystal structure of probable transcriptional regulator from2 pseudomonas aeruginosa
47d1lj9a_
not modelled 98.7 23
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
48c3g3zA_
not modelled 98.7 21
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: the structure of nmb1585, a marr family regulator from neisseria2 meningitidis
49d2etha1
not modelled 98.7 18
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
50c4em1A_
not modelled 98.7 18
PDB header:transcription
Chain: A: PDB Molecule:uncharacterized hth-type transcriptional regulator sar2349;
PDBTitle: staphylococcus aureus marr native
51c2qwwB_
not modelled 98.7 16
PDB header:transcription
Chain: B: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of multiple antibiotic-resistance repressor (marr)2 (yp_013417.1) from listeria monocytogenes 4b f2365 at 2.07 a3 resolution
52d1s3ja_
not modelled 98.7 14
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
53c4fhtA_
not modelled 98.7 21
PDB header:transcription
Chain: A: PDB Molecule:pcav transcriptional regulator;
PDBTitle: crystal structure of the pcav transcriptional regulator from2 streptomyces coelicolor in complex with its natural ligand
54d2bv6a1
not modelled 98.7 16
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
55c2fa5B_
not modelled 98.7 14
PDB header:transcription
Chain: B: PDB Molecule:transcriptional regulator marr/emrr family;
PDBTitle: the crystal structure of an unliganded multiple antibiotic-2 resistance repressor (marr) from xanthomonas campestris
56c3k0lA_
not modelled 98.7 22
PDB header:transcription regulator
Chain: A: PDB Molecule:repressor protein;
PDBTitle: crystal structure of putative marr family transcriptional2 regulator from acinetobacter sp. adp
57c5eriA_
not modelled 98.7 20
PDB header:transcription
Chain: A: PDB Molecule:marr family transcriptional regulator;
PDBTitle: marr protein from peptoclostridium difficile da00132
58c5zc2B_
not modelled 98.7 20
PDB header:flavoprotein
Chain: B: PDB Molecule:p-hydroxyphenylacetate 3-hydroxylase, reductase component;
PDBTitle: acinetobacter baumannii p-hydroxyphenylacetate 3-hydroxylase (hpah),2 reductase component (c1)
59c2rdpA_
not modelled 98.7 14
PDB header:transcription
Chain: A: PDB Molecule:putative transcriptional regulator marr;
PDBTitle: the structure of a marr family protein from bacillus2 stearothermophilus
60c3boqB_
not modelled 98.7 18
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of marr family transcriptional regulator from2 silicibacter pomeroyi
61d1lnwa_
not modelled 98.7 22
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
62c3fm5D_
not modelled 98.7 22
PDB header:transcription regulator
Chain: D: PDB Molecule:transcriptional regulator;
PDBTitle: x-ray crystal structure of transcriptional regulator (marr family)2 from rhodococcus sp. rha1
63c3hrmA_
not modelled 98.7 21
PDB header:transcription regulator
Chain: A: PDB Molecule:hth-type transcriptional regulator sarz;
PDBTitle: crystal structure of staphylococcus aureus protein sarz in sulfenic2 acid form
64d3deua1
not modelled 98.7 19
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
65c3bpxB_
not modelled 98.6 18
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator;
PDBTitle: crystal structure of marr
66c5aiqD_
not modelled 98.6 12
PDB header:transcription
Chain: D: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of ligand-free nadr
67d1jgsa_
not modelled 98.6 19
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
68c2nyxB_
not modelled 98.6 20
PDB header:transcription
Chain: B: PDB Molecule:probable transcriptional regulatory protein, rv1404;
PDBTitle: crystal structure of rv1404 from mycobacterium tuberculosis
69c3kp3B_
not modelled 98.6 19
PDB header:transcription regulator/antibiotic
Chain: B: PDB Molecule:transcriptional regulator tcar;
PDBTitle: staphylococcus epidermidis in complex with ampicillin
70c3cjnA_
not modelled 98.6 24
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of transcriptional regulator, marr family, from2 silicibacter pomeroyi
71c3e6mD_
not modelled 98.6 22
PDB header:transcription regulator
Chain: D: PDB Molecule:marr family transcriptional regulator;
PDBTitle: the crystal structure of a marr family transcriptional2 regulator from silicibacter pomeroyi dss.
72d2fbia1
not modelled 98.6 17
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
73c4xrfA_
not modelled 98.6 18
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of mepr like protein complexed with pseudoligands
74c3ctaA_
not modelled 98.6 21
PDB header:transferase
Chain: A: PDB Molecule:riboflavin kinase;
PDBTitle: crystal structure of riboflavin kinase from thermoplasma acidophilum
75c3fmsA_
not modelled 98.6 19
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator, gntr family;
PDBTitle: crystal structure of tm0439, a gntr transcriptional regulator
76c3deuB_
not modelled 98.6 19
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator slya;
PDBTitle: crystal structure of transcription regulatory protein slya from2 salmonella typhimurium in complex with salicylate ligands
77c5e1xA_
not modelled 98.6 14
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of the organohalide sensing rdhr-cbdba16252 transcriptional regulator in the 3,4-dichlorophenol bound form
78c4r1hA_
not modelled 98.6 22
PDB header:transcription regulator
Chain: A: PDB Molecule:lmo0741 protein;
PDBTitle: gntr family transcriptional regulator from listeria monocytogenes
79c3cdhB_
not modelled 98.6 25
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of the marr family transcriptional regulator spo14532 from silicibacter pomeroyi dss-3
80c3ecoB_
not modelled 98.6 22
PDB header:transcription
Chain: B: PDB Molecule:mepr;
PDBTitle: crystal structure of mepr, a transcription regulator of the2 staphylococcus aureus multidrug efflux pump mepa
81c3f3xA_
not modelled 98.5 26
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator, marr family, putative;
PDBTitle: crystal structure of the transcriptional regulator bldr from2 sulfolobus solfataricus
82d2frha1
not modelled 98.5 12
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
83c4b8xB_
not modelled 98.5 22
PDB header:transcription
Chain: B: PDB Molecule:possible marr-transcriptional regulator;
PDBTitle: near atomic resolution crystal structure of sco5413, a marr family2 transcriptional regulator from streptomyces coelicolor
84c3s2wB_
not modelled 98.5 18
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: the crystal structure of a marr transcriptional regulator from2 methanosarcina mazei go1
85c2hs5A_
not modelled 98.5 21
PDB header:transcription regulator
Chain: A: PDB Molecule:putative transcriptional regulator gntr;
PDBTitle: structural genomics, the crystal structure of a putative2 transcriptional regulator gntr from rhodococcus sp. rha1
86c6c28C_
not modelled 98.5 19
PDB header:dna binding protein
Chain: C: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: transcriptional repressor, cour, bound to p-coumaroyl-coa
87d2a61a1
not modelled 98.5 16
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
88d1p4xa2
not modelled 98.5 21
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
89d1p4xa1
not modelled 98.5 11
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
90d2fbka1
not modelled 98.5 19
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
91c4q77B_
not modelled 98.5 13
PDB header:dna binding protein
Chain: B: PDB Molecule:hth-type transcriptional regulator rot;
PDBTitle: crystal structure of rot, a global regulator of virulence genes in2 staphylococcus aureus
92c2pexA_
not modelled 98.5 22
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator ohrr;
PDBTitle: structure of reduced c22s ohrr from xanthamonas campestris
93c3c7jA_
not modelled 98.5 21
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator, gntr family;
PDBTitle: crystal structure of transcriptional regulator (gntr family member)2 from pseudomonas syringae pv. tomato str. dc3000
94c2du9A_
not modelled 98.5 15
PDB header:transcription
Chain: A: PDB Molecule:predicted transcriptional regulators;
PDBTitle: crystal structure of the transcriptional factor from c.glutamicum
95c3ihuA_
not modelled 98.5 14
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator, gntr family;
PDBTitle: crystal structure of dna binding protein (yp_298823.1) from ralstonia2 eutropha jmp134 at 1.92 a resolution
96c3oopA_
not modelled 98.5 18
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:lin2960 protein;
PDBTitle: the structure of a protein with unknown function from listeria innocua2 clip11262
97c4fx0A_
not modelled 98.5 29
PDB header:transcription regulator
Chain: A: PDB Molecule:probable transcriptional repressor protein;
PDBTitle: crystal structure of m. tuberculosis transcriptional regulator mosr
98c1p4xA_
not modelled 98.5 10
PDB header:transcription
Chain: A: PDB Molecule:staphylococcal accessory regulator a homologue;
PDBTitle: crystal structure of sars protein from staphylococcus aureus
99c5jbrA_
not modelled 98.4 17
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein bcav_2135;
PDBTitle: crystal structure of uncharacterized protein bcav_2135 from2 beutenbergia cavernae
100c3tgnA_
not modelled 98.4 19
PDB header:transcription
Chain: A: PDB Molecule:adc operon repressor adcr;
PDBTitle: crystal structure of the zinc-dependent marr family transcriptional2 regulator adcr in the zn(ii)-bound state
101c4nb5D_
not modelled 98.4 16
PDB header:dna binding protein
Chain: D: PDB Molecule:dna binding protein;
PDBTitle: crystal structure of a transcriptional regulator
102c5hsmA_
not modelled 98.4 22
PDB header:transcription
Chain: A: PDB Molecule:uncharacterized hth-type transcriptional regulator rv2887;
PDBTitle: crystal structure of mycobacterium tuberculosis marr family protein2 rv2887
103c3by6C_
not modelled 98.4 12
PDB header:transcription regulator
Chain: C: PDB Molecule:predicted transcriptional regulator;
PDBTitle: crystal structure of a transcriptional regulator from oenococcus oeni
104d1jhfa1
not modelled 98.4 21
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:LexA repressor, N-terminal DNA-binding domain
105c4p96B_
not modelled 98.4 15
PDB header:transcription
Chain: B: PDB Molecule:fatty acid metabolism regulator protein;
PDBTitle: fadr, fatty acid responsive transcription factor from vibrio cholerae
106c3r0aB_
not modelled 98.4 15
PDB header:transcription regulator
Chain: B: PDB Molecule:putative transcriptional regulator;
PDBTitle: possible transcriptional regulator from methanosarcina mazei go1 (gi2 21227196)
107c6sbsB_
not modelled 98.4 21
PDB header:transcription
Chain: B: PDB Molecule:regulatory protein;
PDBTitle: ytra from sulfolobus acidocaldarius, a gntr-family transcription2 factor
108d1z91a1
not modelled 98.4 15
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
109d1hsja1
not modelled 98.4 16
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
110c3neuA_
not modelled 98.4 16
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:lin1836 protein;
PDBTitle: the crystal structure of a functionally-unknown protein lin1836 from2 listeria innocua clip11262
111c4hamA_
not modelled 98.4 19
PDB header:transcription
Chain: A: PDB Molecule:lmo2241 protein;
PDBTitle: crystal structure of transcriptional antiterminator from listeria2 monocytogenes egd-e
112c4p9fA_
not modelled 98.3 23
PDB header:transcription
Chain: A: PDB Molecule:hth-type transcriptional regulator mcbr;
PDBTitle: e. coli mcbr/yncc
113d3ctaa1
not modelled 98.3 21
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
114c4hblA_
not modelled 98.3 18
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of abfr of staphylococcus epidermidis
115d1stza1
not modelled 98.3 22
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Heat-inducible transcription repressor HrcA, N-terminal domain
116c6ep3B_
not modelled 98.3 20
PDB header:transcription
Chain: B: PDB Molecule:lmo0651 protein;
PDBTitle: lar controls the expression of the listeria monocytogenes agr system2 and mediates virulence.
117d1okra_
not modelled 98.2 16
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Penicillinase repressor
118c3bddD_
not modelled 98.2 16
PDB header:transcription
Chain: D: PDB Molecule:regulatory protein marr;
PDBTitle: crystal structure of a putative multiple antibiotic-resistance2 repressor (ssu05_1136) from streptococcus suis 89/1591 at 2.20 a3 resolution
119c6az6B_
not modelled 98.2 23
PDB header:transcription
Chain: B: PDB Molecule:gntr family transcriptional regulator;
PDBTitle: streptococcus agalactiae gntr
120d1ku9a_
not modelled 98.2 14
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:DNA-binding protein Mj223

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite