Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2937_(drrB)_3273216_3274085
DateThu Aug 8 16:20:09 BST 2019
Unique Job ID6ae7fd74135b9452
SequenceMSGPAIDASP ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:66.838 Y:54.982 Z:41.547
Model (left) based on template c6an7C_
Top template information
PDB header:transport protein
Chain: C: PDB Molecule:transport permease protein;
PDBTitle: crystal structure of o-antigen polysaccharide abc-transporter
Confidence and coverage
Confidence:100.0% Coverage: 83%
239 residues ( 83% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c6an7C_



100.0 10
PDB header:transport protein
Chain: C: PDB Molecule:transport permease protein;
PDBTitle: crystal structure of o-antigen polysaccharide abc-transporter
2c6an7D_



100.0 10
PDB header:transport protein
Chain: D: PDB Molecule:transport permease protein;
PDBTitle: crystal structure of o-antigen polysaccharide abc-transporter
3c5njgB_



100.0 12
PDB header:transport protein
Chain: B: PDB Molecule:atp-binding cassette sub-family g member 2;
PDBTitle: structure of an abc transporter: part of the structure that could be2 built de novo
4c5nj3B_



100.0 11
PDB header:transport protein
Chain: B: PDB Molecule:atp-binding cassette sub-family g member 2;
PDBTitle: structure of an abc transporter: complete structure
5c5do7B_



100.0 9
PDB header:transport protein
Chain: B: PDB Molecule:atp-binding cassette sub-family g member 8;
PDBTitle: crystal structure of the human sterol transporter abcg5/abcg8
6c5do7A_



100.0 12
PDB header:transport protein
Chain: A: PDB Molecule:atp-binding cassette sub-family g member 5;
PDBTitle: crystal structure of the human sterol transporter abcg5/abcg8
7c5xjyA_



99.2 6
PDB header:transport protein
Chain: A: PDB Molecule:atp-binding cassette sub-family a member 1;
PDBTitle: cryo-em structure of human abca1
8c5gasN_



45.1 10
PDB header:hydrolase
Chain: N: PDB Molecule:archaeal/vacuolar-type h+-atpase subunit i;
PDBTitle: thermus thermophilus v/a-atpase, conformation 2
9c5ir6B_



12.1 8
PDB header:oxidoreductase
Chain: B: PDB Molecule:bd-type quinol oxidase subunit ii;
PDBTitle: the structure of bd oxidase from geobacillus thermodenitrificans
10c3cqyA_



11.4 38
PDB header:transferase
Chain: A: PDB Molecule:anhydro-n-acetylmuramic acid kinase;
PDBTitle: crystal structure of a functionally unknown protein (so_1313) from2 shewanella oneidensis mr-1
11c4yh5B_



10.2 43
PDB header:transferase
Chain: B: PDB Molecule:levoglucosan kinase;
PDBTitle: lipomyces starkeyi levoglucosan kinase bound to adp and manganese
12c5n9yB_



9.7 13
PDB header:membrane protein
Chain: B: PDB Molecule:zinc transport protein zntb;
PDBTitle: the full-length structure of zntb
13c3rkoF_



8.4 11
PDB header:oxidoreductase
Chain: F: PDB Molecule:nadh-quinone oxidoreductase subunit j;
PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 e. coli at 3.0 angstrom resolution
14c2k9yA_



7.9 13
PDB header:transferase
Chain: A: PDB Molecule:ephrin type-a receptor 2;
PDBTitle: epha2 dimeric structure in the lipidic bicelle at ph 5.0
15c2k9yB_



7.9 13
PDB header:transferase
Chain: B: PDB Molecule:ephrin type-a receptor 2;
PDBTitle: epha2 dimeric structure in the lipidic bicelle at ph 5.0
16c2x7lP_



7.3 21
PDB header:immune system
Chain: P: PDB Molecule:protein rev;
PDBTitle: implications of the hiv-1 rev dimer structure at 3.2a resolution for2 multimeric binding to the rev response element
17c3lphD_



6.1 21
PDB header:viral protein
Chain: D: PDB Molecule:protein rev;
PDBTitle: crystal structure of the hiv-1 rev dimer
18c5ir6A_



5.1 16
PDB header:oxidoreductase
Chain: A: PDB Molecule:bd-type quinol oxidase subunit i;
PDBTitle: the structure of bd oxidase from geobacillus thermodenitrificans

Binding site prediction 

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below