Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2938_(drrC)_3274082_3274912
DateThu Aug 8 16:20:09 BST 2019
Unique Job IDd12b229e00ad7259
SequenceMITTTSQEIE ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:55.766 Y:53.587 Z:40.983
Model (left) based on template c6an7C_
Top template information
PDB header:transport protein
Chain: C: PDB Molecule:transport permease protein;
PDBTitle: crystal structure of o-antigen polysaccharide abc-transporter
Confidence and coverage
Confidence:100.0% Coverage: 88%
242 residues ( 88% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c6an7C_



100.0 11
PDB header:transport protein
Chain: C: PDB Molecule:transport permease protein;
PDBTitle: crystal structure of o-antigen polysaccharide abc-transporter
2c5njgB_



100.0 12
PDB header:transport protein
Chain: B: PDB Molecule:atp-binding cassette sub-family g member 2;
PDBTitle: structure of an abc transporter: part of the structure that could be2 built de novo
3c6an7D_



100.0 11
PDB header:transport protein
Chain: D: PDB Molecule:transport permease protein;
PDBTitle: crystal structure of o-antigen polysaccharide abc-transporter
4c5do7A_



100.0 9
PDB header:transport protein
Chain: A: PDB Molecule:atp-binding cassette sub-family g member 5;
PDBTitle: crystal structure of the human sterol transporter abcg5/abcg8
5c5do7B_



100.0 12
PDB header:transport protein
Chain: B: PDB Molecule:atp-binding cassette sub-family g member 8;
PDBTitle: crystal structure of the human sterol transporter abcg5/abcg8
6c5nj3B_



100.0 11
PDB header:transport protein
Chain: B: PDB Molecule:atp-binding cassette sub-family g member 2;
PDBTitle: structure of an abc transporter: complete structure
7c5xjyA_



98.6 10
PDB header:transport protein
Chain: A: PDB Molecule:atp-binding cassette sub-family a member 1;
PDBTitle: cryo-em structure of human abca1
8c6adqI_



63.8 21
PDB header:electron transport
Chain: I: PDB Molecule:cytochrome c oxidase subunit ctaj;
PDBTitle: respiratory complex ciii2civ2sod2 from mycobacterium smegmatis
9c6hwhR_



56.2 33
PDB header:electron transport
Chain: R: PDB Molecule:msmeg_4693;
PDBTitle: structure of a functional obligate respiratory supercomplex from2 mycobacterium smegmatis
10c1iflA_



23.0 23
PDB header:virus
Chain: A: PDB Molecule:inovirus;
PDBTitle: molecular models and structural comparisons of native and2 mutant class i filamentous bacteriophages ff (fd, f1, m13),3 if1 and ike
11c6d6tE_



7.8 14
PDB header:transport protein
Chain: E: PDB Molecule:human gaba-a receptor subunit gamma-2;
PDBTitle: human gaba-a receptor alpha1-beta2-gamma2 subtype in complex with gaba2 and flumazenil, conformation b
12d1fftb2



7.7 17
Fold:Transmembrane helix hairpin
Superfamily:Cytochrome c oxidase subunit II-like, transmembrane region
Family:Cytochrome c oxidase subunit II-like, transmembrane region
13c2llyA_



6.6 11
PDB header:transport protein
Chain: A: PDB Molecule:neuronal acetylcholine receptor subunit alpha-4;
PDBTitle: nmr structures of the transmembrane domains of the nachr a4 subunit
14c2k58B_



6.3 15
PDB header:transport protein
Chain: B: PDB Molecule:neuronal acetylcholine receptor subunit beta-2;
PDBTitle: nmr structures of the first transmembrane domain of the2 neuronal acetylcholine receptor beta 2 subunit
15c2mawA_



5.7 9
PDB header:membrane protein
Chain: A: PDB Molecule:neuronal acetylcholine receptor subunit alpha-7;
PDBTitle: nmr structures of the alpha7 nachr transmembrane domain.
16c4hkrB_



5.5 11
PDB header:transport protein
Chain: B: PDB Molecule:calcium release-activated calcium channel protein 1;
PDBTitle: calcium release-activated calcium (crac) channel orai
17c4hkrA_



5.2 11
PDB header:transport protein
Chain: A: PDB Molecule:calcium release-activated calcium channel protein 1;
PDBTitle: calcium release-activated calcium (crac) channel orai
18c4cdiC_



5.1 22
PDB header:membrane protein
Chain: C: PDB Molecule:predicted protein;
PDBTitle: crystal structure of acrb-acrz complex
19c2bbjB_



5.1 15
PDB header:metal transport/membrane protein
Chain: B: PDB Molecule:divalent cation transport-related protein;
PDBTitle: crystal structure of the cora mg2+ transporter
20c2jwaA_



5.0 42
PDB header:transferase
Chain: A: PDB Molecule:receptor tyrosine-protein kinase erbb-2;
PDBTitle: erbb2 transmembrane segment dimer spatial structure

Binding site prediction 

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below