Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3206c_(moeB1)_3582528_3583706
DateThu Aug 8 16:20:40 BST 2019
Unique Job ID447bfaff2a80b58e
SequenceVSTSLPPLVE ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:58.142 Y:47.068 Z:46.033
Model (left) based on template c6h77B_
Top template information
PDB header:signaling protein
Chain: B: PDB Molecule:ubiquitin-like modifier-activating enzyme 5;
PDBTitle: e1 enzyme for ubiquitin like protein activation in complex with ubl
Confidence and coverage
Confidence:100.0% Coverage: 63%
247 residues ( 63% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c6h77B_
100.0 22
PDB header:signaling protein
Chain: B: PDB Molecule:ubiquitin-like modifier-activating enzyme 5;
PDBTitle: e1 enzyme for ubiquitin like protein activation in complex with ubl
2c1zfnA_
100.0 36
PDB header:transferase
Chain: A: PDB Molecule:adenylyltransferase thif;
PDBTitle: structural analysis of escherichia coli thif
3d1jw9b_
100.0 38
Fold:Activating enzymes of the ubiquitin-like proteins
Superfamily:Activating enzymes of the ubiquitin-like proteins
Family:Molybdenum cofactor biosynthesis protein MoeB
4c3h9gA_
100.0 23
PDB header:transferase/antibiotic
Chain: A: PDB Molecule:mccb protein;
PDBTitle: crystal structure of e. coli mccb + mcca-n7isoasn
5d1yovb1
100.0 30
Fold:Activating enzymes of the ubiquitin-like proteins
Superfamily:Activating enzymes of the ubiquitin-like proteins
Family:Ubiquitin activating enzymes (UBA)
6c5ff5A_
100.0 26
PDB header:transferase
Chain: A: PDB Molecule:paaa;
PDBTitle: crystal structure of semet paaa
7c3gznB_
100.0 29
PDB header:protein binding/ligase
Chain: B: PDB Molecule:nedd8-activating enzyme e1 catalytic subunit;
PDBTitle: structure of nedd8-activating enzyme in complex with nedd8 and mln4924
8c3vh3A_
100.0 20
PDB header:metal binding protein/protein transport
Chain: A: PDB Molecule:ubiquitin-like modifier-activating enzyme atg7;
PDBTitle: crystal structure of atg7ctd-atg8 complex
9c3vh1A_
100.0 24
PDB header:metal binding protein
Chain: A: PDB Molecule:ubiquitin-like modifier-activating enzyme atg7;
PDBTitle: crystal structure of saccharomyces cerevisiae atg7 (1-595)
10c4d7aA_
100.0 21
PDB header:ligase
Chain: A: PDB Molecule:trna threonylcarbamoyladenosine dehydratase;
PDBTitle: crystal structure of e. coli trna n6-threonylcarbamoyladenosine2 dehydratase, tcda, in complex with amp at 1.801 angstroem3 resolution
11c2nvuB_
100.0 31
PDB header:protein turnover, ligase
Chain: B: PDB Molecule:maltose binding protein/nedd8-activating enzyme
PDBTitle: structure of appbp1-uba3~nedd8-nedd8-mgatp-ubc12(c111a), a2 trapped ubiquitin-like protein activation complex
12c3kydB_
100.0 25
PDB header:ligase
Chain: B: PDB Molecule:sumo-activating enzyme subunit 2;
PDBTitle: human sumo e1~sumo1-amp tetrahedral intermediate mimic
13c3kycB_
100.0 28
PDB header:ligase
Chain: B: PDB Molecule:sumo-activating enzyme subunit 2;
PDBTitle: human sumo e1 complex with a sumo1-amp mimic
14c1y8qA_
100.0 23
PDB header:ligase
Chain: A: PDB Molecule:ubiquitin-like 1 activating enzyme e1a;
PDBTitle: sumo e1 activating enzyme sae1-sae2-mg-atp complex
15c1y8qD_
100.0 26
PDB header:ligase
Chain: D: PDB Molecule:ubiquitin-like 2 activating enzyme e1b;
PDBTitle: sumo e1 activating enzyme sae1-sae2-mg-atp complex
16c3gucB_
100.0 19
PDB header:transferase
Chain: B: PDB Molecule:ubiquitin-like modifier-activating enzyme 5;
PDBTitle: human ubiquitin-activating enzyme 5 in complex with amppnp
17d1yova1
100.0 30
Fold:Activating enzymes of the ubiquitin-like proteins
Superfamily:Activating enzymes of the ubiquitin-like proteins
Family:Ubiquitin activating enzymes (UBA)
18c6dc6A_
100.0 30
PDB header:signaling protein/ligase
Chain: A: PDB Molecule:ubiquitin-like modifier-activating enzyme 1;
PDBTitle: crystal structure of human ubiquitin activating enzyme e1 (uba1) in2 complex with ubiquitin
19c4p22A_
100.0 26
PDB header:ligase
Chain: A: PDB Molecule:ubiquitin-like modifier-activating enzyme 1;
PDBTitle: crystal structure of n-terminal fragments of e1
20c4ii3A_
100.0 27
PDB header:ligase
Chain: A: PDB Molecule:ubiquitin-activating enzyme e1 1;
PDBTitle: crystal structure of s. pombe ubiquitin activating enzyme 1 (uba1) in2 complex with ubiquitin and atp/mg
21c3cmmA_
not modelled 100.0 28
PDB header:ligase/protein binding
Chain: A: PDB Molecule:ubiquitin-activating enzyme e1 1;
PDBTitle: crystal structure of the uba1-ubiquitin complex
22c3wv9D_
not modelled 100.0 21
PDB header:transferase
Chain: D: PDB Molecule:hmd co-occurring protein hcge;
PDBTitle: guanylylpyridinol (gp)- and atp-bound hcge from methanothermobacter2 marburgensis
23c3i2vA_
not modelled 99.9 28
PDB header:transferase
Chain: A: PDB Molecule:adenylyltransferase and sulfurtransferase mocs3;
PDBTitle: crystal structure of human mocs3 rhodanese-like domain
24c4f67A_
not modelled 99.9 16
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:upf0176 protein lpg2838;
PDBTitle: three dimensional structure of the double mutant of upf0176 protein2 lpg2838 from legionella pneumophila at the resolution 1.8a, northeast3 structural genomics consortium (nesg) target lgr82
25c3tp9B_
not modelled 99.9 32
PDB header:hydrolase
Chain: B: PDB Molecule:beta-lactamase and rhodanese domain protein;
PDBTitle: crystal structure of alicyclobacillus acidocaldarius protein with2 beta-lactamase and rhodanese domains
26c1yt8A_
not modelled 99.9 16
PDB header:transferase
Chain: A: PDB Molecule:thiosulfate sulfurtransferase;
PDBTitle: crystal structure of thiosulfate sulfurtransferase from pseudomonas2 aeruginosa
27d1yt8a4
not modelled 99.8 21
Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Multidomain sulfurtransferase (rhodanese)
28d1yt8a1
not modelled 99.8 16
Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Multidomain sulfurtransferase (rhodanese)
29c3ilmD_
not modelled 99.8 26
PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:alr3790 protein;
PDBTitle: crystal structure of the alr3790 protein from anabaena sp. northeast2 structural genomics consortium target nsr437h
30c3fojA_
not modelled 99.8 28
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of ssp1007 from staphylococcus2 saprophyticus subsp. saprophyticus. northeast structural3 genomics target syr101a.
31c3d1pA_
not modelled 99.8 22
PDB header:transferase
Chain: A: PDB Molecule:putative thiosulfate sulfurtransferase yor285w;
PDBTitle: atomic resolution structure of uncharacterized protein from2 saccharomyces cerevisiae
32c3icrA_
not modelled 99.8 25
PDB header:oxidoreductase
Chain: A: PDB Molecule:coenzyme a-disulfide reductase;
PDBTitle: crystal structure of oxidized bacillus anthracis coadr-rhd
33c2hhgA_
not modelled 99.8 26
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein rpa3614;
PDBTitle: structure of protein of unknown function rpa3614, possible tyrosine2 phosphatase, from rhodopseudomonas palustris cga009
34c5ve5C_
not modelled 99.8 29
PDB header:oxidoreductase, transferase
Chain: C: PDB Molecule:bpprf;
PDBTitle: crystal structure of persulfide dioxygenase rhodanese fusion protein2 with rhodanese domain inactivating mutation (c314s) from burkholderia3 phytofirmans in complex with glutathione
35c3emeA_
not modelled 99.8 28
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:rhodanese-like domain protein;
PDBTitle: crystal structure of rhodanese-like domain protein from2 staphylococcus aureus
36d1yt8a2
not modelled 99.8 25
Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Multidomain sulfurtransferase (rhodanese)
37c6mxvA_
not modelled 99.8 26
PDB header:unknown function
Chain: A: PDB Molecule:rhodanese-like family protein;
PDBTitle: the crystal structure of a rhodanese-like family protein from2 francisella tularensis subsp. tularensis schu s4
38c6bevB_
not modelled 99.8 31
PDB header:transferase
Chain: B: PDB Molecule:thiosulfate sulfurtransferase/rhodanese-like domain-
PDBTitle: human single domain sulfurtranferase tstd1
39d1qxna_
not modelled 99.8 22
Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Single-domain sulfurtransferase
40d1yt8a3
not modelled 99.8 25
Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Multidomain sulfurtransferase (rhodanese)
41d1c25a_
not modelled 99.8 19
Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Cell cycle control phosphatase, catalytic domain
42c3gk5A_
not modelled 99.8 27
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized rhodanese-related protein tvg0868615;
PDBTitle: crystal structure of rhodanese-related protein (tvg0868615) from2 thermoplasma volcanium, northeast structural genomics consortium3 target tvr109a
43d1tq1a_
not modelled 99.8 27
Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Single-domain sulfurtransferase
44c3ntaA_
not modelled 99.8 25
PDB header:oxidoreductase
Chain: A: PDB Molecule:fad-dependent pyridine nucleotide-disulphide
PDBTitle: structure of the shewanella loihica pv-4 nadh-dependent persulfide2 reductase
45c3nhvE_
not modelled 99.8 26
PDB header:structural genomics, unknown function
Chain: E: PDB Molecule:bh2092 protein;
PDBTitle: crystal structure of bh2092 protein from bacillus halodurans,2 northeast structural genomics consortium target bhr228f
46c6h98A_
not modelled 99.8 22
PDB header:transferase
Chain: A: PDB Molecule:sulfurtransferase;
PDBTitle: native crystal structure of anaerobic ergothioneine biosynthesis2 enzyme from chlorobium limicola.
47c3f4aA_
not modelled 99.8 21
PDB header:hydrolase
Chain: A: PDB Molecule:uncharacterized protein ygr203w;
PDBTitle: structure of ygr203w, a yeast protein tyrosine phosphatase of the2 rhodanese family
48c3k9rA_
not modelled 99.8 24
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:alr3790 protein;
PDBTitle: x-ray structure of the rhodanese-like domain of the alr3790 protein2 from anabaena sp. northeast structural genomics consortium target3 nsr437c.
49d1gmxa_
not modelled 99.8 19
Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Single-domain sulfurtransferase
50d1ymka1
not modelled 99.8 19
Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Cell cycle control phosphatase, catalytic domain
51c2moiA_
not modelled 99.8 27
PDB header:membrane protein
Chain: A: PDB Molecule:inner membrane protein ygap;
PDBTitle: 3d nmr structure of the cytoplasmic rhodanese domain of the inner2 membrane protein ygap from escherichia coli
52c2fsxA_
not modelled 99.8 25
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:cog0607: rhodanese-related sulfurtransferase;
PDBTitle: crystal structure of rv0390 from m. tuberculosis
53c2dcqA_
not modelled 99.7 20
PDB header:unknown function
Chain: A: PDB Molecule:putative protein at4g01050;
PDBTitle: fully automated nmr structure determination of the2 rhodanese homology domain at4g01050(175-295) from3 arabidopsis thaliana
54c2j6pF_
not modelled 99.7 24
PDB header:oxidoreductase
Chain: F: PDB Molecule:sb(v)-as(v) reductase;
PDBTitle: structure of as-sb reductase from leishmania major
55c3g5jA_
not modelled 99.7 29
PDB header:nucleotide binding protein
Chain: A: PDB Molecule:putative atp/gtp binding protein;
PDBTitle: crystal structure of n-terminal domain of putative atp/gtp binding2 protein from clostridium difficile 630
56c1e0cA_
not modelled 99.7 24
PDB header:sulfurtransferase
Chain: A: PDB Molecule:sulfurtransferase;
PDBTitle: sulfurtransferase from azotobacter vinelandii
57c2uzqE_
not modelled 99.7 20
PDB header:hydrolase
Chain: E: PDB Molecule:m-phase inducer phosphatase 2;
PDBTitle: protein phosphatase, new crystal form
58c3aaxB_
not modelled 99.7 21
PDB header:transferase
Chain: B: PDB Molecule:putative thiosulfate sulfurtransferase;
PDBTitle: crystal structure of probable thiosulfate sulfurtransferase2 cysa3 (rv3117) from mycobacterium tuberculosis: monoclinic3 form
59c1boiA_
not modelled 99.7 21
PDB header:transferase
Chain: A: PDB Molecule:rhodanese;
PDBTitle: n-terminally truncated rhodanese
60c3hzuA_
not modelled 99.7 24
PDB header:transferase
Chain: A: PDB Molecule:thiosulfate sulfurtransferase ssea;
PDBTitle: crystal structure of probable thiosulfate sulfurtransferase ssea2 (rhodanese) from mycobacterium tuberculosis
61c1urhA_
not modelled 99.7 21
PDB header:transferase
Chain: A: PDB Molecule:3-mercaptopyruvate sulfurtransferase;
PDBTitle: the "rhodanese" fold and catalytic mechanism of2 3-mercaptopyruvate sulfotransferases: crystal structure3 of ssea from escherichia coli
62c1uarA_
not modelled 99.7 24
PDB header:transferase
Chain: A: PDB Molecule:rhodanese;
PDBTitle: crystal structure of rhodanese from thermus thermophilus hb8
63d1e0ca1
not modelled 99.7 24
Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Multidomain sulfurtransferase (rhodanese)
64c2jtqA_
not modelled 99.7 25
PDB header:transferase
Chain: A: PDB Molecule:phage shock protein e;
PDBTitle: rhodanese from e.coli
65c3olhA_
not modelled 99.7 22
PDB header:transferase
Chain: A: PDB Molecule:3-mercaptopyruvate sulfurtransferase;
PDBTitle: human 3-mercaptopyruvate sulfurtransferase
66d1uara2
not modelled 99.7 24
Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Multidomain sulfurtransferase (rhodanese)
67c3op3A_
not modelled 99.7 20
PDB header:hydrolase
Chain: A: PDB Molecule:m-phase inducer phosphatase 3;
PDBTitle: crystal structure of cell division cycle 25c protein isoform a from2 homo sapiens
68d1t3ka_
not modelled 99.7 23
Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Cell cycle control phosphatase, catalytic domain
69c2k0zA_
not modelled 99.7 21
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein hp1203;
PDBTitle: solution nmr structure of protein hp1203 from helicobacter pylori2 26695. northeast structural genomics consortium (nesg) target3 pt1/ontario center for structural proteomics target hp1203
70d1rhsa1
not modelled 99.7 20
Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Multidomain sulfurtransferase (rhodanese)
71c3utnX_
not modelled 99.7 27
PDB header:transferase
Chain: X: PDB Molecule:thiosulfate sulfurtransferase tum1;
PDBTitle: crystal structure of tum1 protein from saccharomyces cerevisiae
72c3ippA_
not modelled 99.6 23
PDB header:transferase
Chain: A: PDB Molecule:putative thiosulfate sulfurtransferase ynje;
PDBTitle: crystal structure of sulfur-free ynje
73d1rhsa2
not modelled 99.6 22
Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Multidomain sulfurtransferase (rhodanese)
74c1wv9B_
not modelled 99.6 27
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:rhodanese homolog tt1651;
PDBTitle: crystal structure of rhodanese homolog tt1651 from an2 extremely thermophilic bacterium thermus thermophilus hb8
75d1e0ca2
not modelled 99.6 22
Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Multidomain sulfurtransferase (rhodanese)
76d1urha1
not modelled 99.6 24
Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Multidomain sulfurtransferase (rhodanese)
77c2vswB_
not modelled 99.6 26
PDB header:hydrolase
Chain: B: PDB Molecule:dual specificity protein phosphatase 16;
PDBTitle: the structure of the rhodanese domain of the human dual specificity2 phosphatase 16
78d1okga2
not modelled 99.6 18
Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Multidomain sulfurtransferase (rhodanese)
79d1whba_
not modelled 99.5 21
Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Ubiquitin carboxyl-terminal hydrolase 8, USP8
80d1uara1
not modelled 99.5 25
Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Multidomain sulfurtransferase (rhodanese)
81d1okga1
not modelled 99.5 17
Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Multidomain sulfurtransferase (rhodanese)
82d2gwfa1
not modelled 99.5 23
Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Ubiquitin carboxyl-terminal hydrolase 8, USP8
83c2eg4B_
not modelled 99.5 30
PDB header:transferase
Chain: B: PDB Molecule:probable thiosulfate sulfurtransferase;
PDBTitle: crystal structure of probable thiosulfate sulfurtransferase
84c2oucB_
not modelled 99.5 22
PDB header:hydrolase
Chain: B: PDB Molecule:dual specificity protein phosphatase 10;
PDBTitle: crystal structure of the map kinase binding domain of mkp5
85c3r2uC_
not modelled 99.5 17
PDB header:hydrolase
Chain: C: PDB Molecule:metallo-beta-lactamase family protein;
PDBTitle: 2.1 angstrom resolution crystal structure of metallo-beta-lactamase2 from staphylococcus aureus subsp. aureus col
86c1okgA_
not modelled 99.4 17
PDB header:transferase
Chain: A: PDB Molecule:possible 3-mercaptopyruvate sulfurtransferase;
PDBTitle: 3-mercaptopyruvate sulfurtransferase from leishmania major
87d1hzma_
not modelled 99.4 20
Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Cell cycle control phosphatase, catalytic domain
88d1urha2
not modelled 99.4 17
Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Multidomain sulfurtransferase (rhodanese)
89c4bs9A_
not modelled 99.3 21
PDB header:isomerase
Chain: A: PDB Molecule:trud;
PDBTitle: structure of the heterocyclase trud
90c4rl6A_
not modelled 98.6 17
PDB header:oxidoreductase
Chain: A: PDB Molecule:saccharopine dehydrogenase;
PDBTitle: crystal structure of the q04l03_strp2 protein from streptococcus2 pneumoniae. northeast structural genomics consortium target spr105
91c2axqA_
not modelled 98.4 17
PDB header:oxidoreductase
Chain: A: PDB Molecule:saccharopine dehydrogenase;
PDBTitle: apo histidine-tagged saccharopine dehydrogenase (l-glu2 forming) from saccharomyces cerevisiae
92c1e5lA_
not modelled 98.4 18
PDB header:oxidoreductase
Chain: A: PDB Molecule:saccharopine reductase;
PDBTitle: apo saccharopine reductase from magnaporthe grisea
93c5l78A_
not modelled 98.3 21
PDB header:oxidoreductase
Chain: A: PDB Molecule:alpha-aminoadipic semialdehyde synthase, mitochondrial;
PDBTitle: crystal structure of human aminoadipate semialdehyde synthase,2 saccharopine dehydrogenase domain (in nad+ bound form)
94d1pjqa1
not modelled 98.3 19
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Siroheme synthase N-terminal domain-like
95d1vi2a1
not modelled 98.2 18
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Aminoacid dehydrogenase-like, C-terminal domain
96c3ic5A_
not modelled 98.1 20
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative saccharopine dehydrogenase;
PDBTitle: n-terminal domain of putative saccharopine dehydrogenase from ruegeria2 pomeroyi.
97c2z2vA_
not modelled 98.1 18
PDB header:oxidoreductase
Chain: A: PDB Molecule:hypothetical protein ph1688;
PDBTitle: crystal structure of l-lysine dehydrogenase from2 hyperthermophilic archaeon pyrococcus horikoshii
98c1vi2B_
not modelled 98.0 19
PDB header:oxidoreductase
Chain: B: PDB Molecule:shikimate 5-dehydrogenase 2;
PDBTitle: crystal structure of shikimate-5-dehydrogenase with nad
99c4inaA_
not modelled 98.0 24
PDB header:oxidoreductase
Chain: A: PDB Molecule:saccharopine dehydrogenase;
PDBTitle: crystal structure of the q7mss8_wolsu protein from wolinella2 succinogenes. northeast structural genomics consortium target wsr35
100c2nloA_
not modelled 97.9 31
PDB header:oxidoreductase
Chain: A: PDB Molecule:shikimate dehydrogenase;
PDBTitle: crystal structure of the quinate dehydrogenase from corynebacterium2 glutamicum
101c3tozA_
not modelled 97.9 16
PDB header:oxidoreductase
Chain: A: PDB Molecule:shikimate dehydrogenase;
PDBTitle: 2.2 angstrom crystal structure of shikimate 5-dehydrogenase from2 listeria monocytogenes in complex with nad.
102c1gpjA_
not modelled 97.9 22
PDB header:reductase
Chain: A: PDB Molecule:glutamyl-trna reductase;
PDBTitle: glutamyl-trna reductase from methanopyrus kandleri
103d1pzga1
not modelled 97.8 16
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:LDH N-terminal domain-like
104d1e5qa1
not modelled 97.8 20
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
105c1pjtB_
not modelled 97.7 20
PDB header:transferase/oxidoreductase/lyase
Chain: B: PDB Molecule:siroheme synthase;
PDBTitle: the structure of the ser128ala point-mutant variant of cysg, the2 multifunctional methyltransferase/dehydrogenase/ferrochelatase for3 siroheme synthesis
106c3pgjB_
not modelled 97.7 28
PDB header:oxidoreductase
Chain: B: PDB Molecule:shikimate dehydrogenase;
PDBTitle: 2.49 angstrom resolution crystal structure of shikimate 5-2 dehydrogenase (aroe) from vibrio cholerae o1 biovar eltor str. n169613 in complex with shikimate
107c4plpB_
not modelled 97.7 18
PDB header:transferase
Chain: B: PDB Molecule:homospermidine synthase;
PDBTitle: crystal structure of the homospermidine synthase (hss) from2 blastochloris viridis in complex with nad
108c3tumA_
not modelled 97.7 29
PDB header:oxidoreductase
Chain: A: PDB Molecule:shikimate dehydrogenase family protein;
PDBTitle: 2.15 angstrom resolution crystal structure of a shikimate2 dehydrogenase family protein from pseudomonas putida kt2440 in3 complex with nad+
109c4n7rB_
not modelled 97.7 28
PDB header:oxidoreductase/protein binding
Chain: B: PDB Molecule:glutamyl-trna reductase 1, chloroplastic;
PDBTitle: crystal structure of arabidopsis glutamyl-trna reductase in complex2 with its binding protein
110c2eggA_
not modelled 97.7 24
PDB header:oxidoreductase
Chain: A: PDB Molecule:shikimate 5-dehydrogenase;
PDBTitle: crystal structure of shikimate 5-dehydrogenase (aroe) from geobacillus2 kaustophilus
111c4bgvB_
not modelled 97.6 25
PDB header:oxidoreductase
Chain: B: PDB Molecule:malate dehydrogenase;
PDBTitle: 1.8 a resolution structure of the malate dehydrogenase from2 picrophilus torridus in its apo form
112c3u62A_
not modelled 97.6 24
PDB header:oxidoreductase
Chain: A: PDB Molecule:shikimate dehydrogenase;
PDBTitle: crystal structure of shikimate dehydrogenase from thermotoga maritima
113c2hjrK_
not modelled 97.6 19
PDB header:oxidoreductase
Chain: K: PDB Molecule:malate dehydrogenase;
PDBTitle: crystal structure of cryptosporidium parvum malate2 dehydrogenase
114d1gpja2
not modelled 97.6 25
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Aminoacid dehydrogenase-like, C-terminal domain
115d9ldta1
not modelled 97.6 14
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:LDH N-terminal domain-like
116d1i0za1
not modelled 97.5 18
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:LDH N-terminal domain-like
117c1bg6A_
not modelled 97.5 25
PDB header:oxidoreductase
Chain: A: PDB Molecule:n-(1-d-carboxylethyl)-l-norvaline dehydrogenase;
PDBTitle: crystal structure of the n-(1-d-carboxylethyl)-l-norvaline2 dehydrogenase from arthrobacter sp. strain 1c
118c4tskA_
not modelled 97.5 18
PDB header:oxidoreductase,isomerase
Chain: A: PDB Molecule:ketol-acid reductoisomerase;
PDBTitle: ketol-acid reductoisomerase from alicyclobacillus acidocaldarius
119d1np3a2
not modelled 97.5 21
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:6-phosphogluconate dehydrogenase-like, N-terminal domain
120c3o8qB_
not modelled 97.5 29
PDB header:oxidoreductase
Chain: B: PDB Molecule:shikimate 5-dehydrogenase i alpha;
PDBTitle: 1.45 angstrom resolution crystal structure of shikimate 5-2 dehydrogenase (aroe) from vibrio cholerae

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below