Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3308_(pmmB)_3695035_3696639
DateThu Aug 8 16:20:51 BST 2019
Unique Job IDb9820fb3bc34b1d2
SequenceVTPENWIAHD ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:53.322 Y:72.135 Z:66.808
Model (left) based on template c1c4gB_
Top template information
PDB header:transferase
Chain: B: PDB Molecule:protein (alpha-d-glucose 1-phosphate phosphoglucomutase);
PDBTitle: phosphoglucomutase vanadate based transition state analog complex
Confidence and coverage
Confidence:100.0% Coverage: 91%
485 residues ( 91% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in JSmol
For other options to view your downloaded structure offline see the FAQ

Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c1c4gB_
100.0 21
PDB header:transferase
Chain: B: PDB Molecule:protein (alpha-d-glucose 1-phosphate phosphoglucomutase);
PDBTitle: phosphoglucomutase vanadate based transition state analog complex
2c1kfiA_
100.0 19
PDB header:isomerase
Chain: A: PDB Molecule:phosphoglucomutase 1;
PDBTitle: crystal structure of the exocytosis-sensitive2 phosphoprotein, pp63/parafusin (phosphoglucomutase) from3 paramecium
3c2fuvB_
100.0 22
PDB header:isomerase
Chain: B: PDB Molecule:phosphoglucomutase;
PDBTitle: phosphoglucomutase from salmonella typhimurium.
4c1wqaB_
100.0 26
PDB header:isomerase
Chain: B: PDB Molecule:phospho-sugar mutase;
PDBTitle: crystal structure of pyrococcus horikoshii2 phosphomannomutase/phosphoglucomutase complexed with mg2+
5c3c04A_
100.0 20
PDB header:isomerase
Chain: A: PDB Molecule:phosphomannomutase/phosphoglucomutase;
PDBTitle: structure of the p368g mutant of pmm/pgm from p. aeruginosa
6c2f7lA_
100.0 24
PDB header:isomerase
Chain: A: PDB Molecule:455aa long hypothetical phospho-sugar mutase;
PDBTitle: crystal structure of sulfolobus tokodaii2 phosphomannomutase/phosphoglucomutase
7c3uw2A_
100.0 22
PDB header:isomerase
Chain: A: PDB Molecule:phosphoglucomutase/phosphomannomutase family protein;
PDBTitle: x-ray crystal structure of phosphoglucomutase/phosphomannomutase2 family protein (bth_i1489)from burkholderia thailandensis
8c4qg5D_
100.0 23
PDB header:isomerase
Chain: D: PDB Molecule:putative phosphoglucomutase;
PDBTitle: crystal structure of phosphoglucomutase from leishmania major at 3.52 angstrom resolution
9c5bmpA_
100.0 23
PDB header:isomerase
Chain: A: PDB Molecule:phosphoglucomutase;
PDBTitle: crystal structure of phosphoglucomutase from xanthomonas citri2 complexed with glucose-1-phosphate
10c2z0fA_
100.0 27
PDB header:isomerase
Chain: A: PDB Molecule:putative phosphoglucomutase;
PDBTitle: crystal structure of putative phosphoglucomutase from thermus2 thermophilus hb8
11c1tuoA_
100.0 28
PDB header:biosynthetic protein
Chain: A: PDB Molecule:putative phosphomannomutase;
PDBTitle: crystal structure of putative phosphomannomutase from2 thermus thermophilus hb8
12c3pdkB_
100.0 21
PDB header:isomerase
Chain: B: PDB Molecule:phosphoglucosamine mutase;
PDBTitle: crystal structure of phosphoglucosamine mutase from b. anthracis
13c6gyzB_
100.0 19
PDB header:isomerase
Chain: B: PDB Molecule:phosphoglucosamine mutase;
PDBTitle: crystal structure of glmm from staphylococcus aureus
14c4hjhA_
100.0 22
PDB header:isomerase
Chain: A: PDB Molecule:phosphomannomutase;
PDBTitle: iodide sad phased crystal structure of a phosphoglucomutase from2 brucella melitensis complexed with glucose-6-phosphate
15c3i3wB_
100.0 21
PDB header:isomerase
Chain: B: PDB Molecule:phosphoglucosamine mutase;
PDBTitle: structure of a phosphoglucosamine mutase from francisella tularensis
16c2dkdA_
100.0 20
PDB header:isomerase
Chain: A: PDB Molecule:phosphoacetylglucosamine mutase;
PDBTitle: crystal structure of n-acetylglucosamine-phosphate mutase,2 a member of the alpha-d-phosphohexomutase superfamily, in3 the product complex
17c4bjuB_
100.0 21
PDB header:isomerase
Chain: B: PDB Molecule:n-acetylglucosamine-phosphate mutase;
PDBTitle: genetic and structural validation of aspergillus fumigatus2 n-acetylphosphoglucosamine mutase as an antifungal target
18d1kfia1
100.0 20
Fold:Phosphoglucomutase, first 3 domains
Superfamily:Phosphoglucomutase, first 3 domains
Family:Phosphoglucomutase, first 3 domains
19d3pmga1
100.0 22
Fold:Phosphoglucomutase, first 3 domains
Superfamily:Phosphoglucomutase, first 3 domains
Family:Phosphoglucomutase, first 3 domains
20d1p5dx1
100.0 24
Fold:Phosphoglucomutase, first 3 domains
Superfamily:Phosphoglucomutase, first 3 domains
Family:Phosphoglucomutase, first 3 domains
21d3pmga3
not modelled 99.8 22
Fold:Phosphoglucomutase, first 3 domains
Superfamily:Phosphoglucomutase, first 3 domains
Family:Phosphoglucomutase, first 3 domains
22d1kfia3
not modelled 99.8 25
Fold:Phosphoglucomutase, first 3 domains
Superfamily:Phosphoglucomutase, first 3 domains
Family:Phosphoglucomutase, first 3 domains
23d1p5dx2
not modelled 99.7 22
Fold:Phosphoglucomutase, first 3 domains
Superfamily:Phosphoglucomutase, first 3 domains
Family:Phosphoglucomutase, first 3 domains
24d1p5dx3
not modelled 99.7 17
Fold:Phosphoglucomutase, first 3 domains
Superfamily:Phosphoglucomutase, first 3 domains
Family:Phosphoglucomutase, first 3 domains
25d3pmga2
not modelled 99.6 20
Fold:Phosphoglucomutase, first 3 domains
Superfamily:Phosphoglucomutase, first 3 domains
Family:Phosphoglucomutase, first 3 domains
26d1kfia2
not modelled 99.6 19
Fold:Phosphoglucomutase, first 3 domains
Superfamily:Phosphoglucomutase, first 3 domains
Family:Phosphoglucomutase, first 3 domains
27d1p5dx4
not modelled 99.3 14
Fold:TBP-like
Superfamily:Phosphoglucomutase, C-terminal domain
Family:Phosphoglucomutase, C-terminal domain
28d1wjwa_
not modelled 98.6 23
Fold:TBP-like
Superfamily:Phosphoglucomutase, C-terminal domain
Family:Phosphoglucomutase, C-terminal domain
29d1kfia4
not modelled 97.3 15
Fold:TBP-like
Superfamily:Phosphoglucomutase, C-terminal domain
Family:Phosphoglucomutase, C-terminal domain
30d3pmga4
not modelled 97.0 20
Fold:TBP-like
Superfamily:Phosphoglucomutase, C-terminal domain
Family:Phosphoglucomutase, C-terminal domain
31c6ofuC_
not modelled 89.2 17
PDB header:lyase
Chain: C: PDB Molecule:ydji aldolase;
PDBTitle: x-ray crystal structure of the ydji aldolase from escherichia coli k12
32d7reqa2
not modelled 87.0 10
Fold:Flavodoxin-like
Superfamily:Cobalamin (vitamin B12)-binding domain
Family:Cobalamin (vitamin B12)-binding domain
33c2i2xD_
not modelled 85.7 16
PDB header:transferase
Chain: D: PDB Molecule:methyltransferase 1;
PDBTitle: crystal structure of methanol:cobalamin methyltransferase complex2 mtabc from methanosarcina barkeri
34c3pm6B_
not modelled 85.6 20
PDB header:lyase
Chain: B: PDB Molecule:putative fructose-bisphosphate aldolase;
PDBTitle: crystal structure of a putative fructose-1,6-biphosphate aldolase from2 coccidioides immitis solved by combined sad mr
35d3bula2
not modelled 85.1 10
Fold:Flavodoxin-like
Superfamily:Cobalamin (vitamin B12)-binding domain
Family:Cobalamin (vitamin B12)-binding domain
36c3he8A_
not modelled 83.8 26
PDB header:isomerase
Chain: A: PDB Molecule:ribose-5-phosphate isomerase;
PDBTitle: structural study of clostridium thermocellum ribose-5-phosphate2 isomerase b
37d1nn4a_
not modelled 83.2 25
Fold:Ribose/Galactose isomerase RpiB/AlsB
Superfamily:Ribose/Galactose isomerase RpiB/AlsB
Family:Ribose/Galactose isomerase RpiB/AlsB
38c3s5pA_
not modelled 82.4 22
PDB header:isomerase
Chain: A: PDB Molecule:ribose 5-phosphate isomerase;
PDBTitle: crystal structure of ribose-5-phosphate isomerase b rpib from giardia2 lamblia
39d1gvfa_
not modelled 80.7 14
Fold:TIM beta/alpha-barrel
Superfamily:Aldolase
Family:Class II FBP aldolase
40d1rvga_
not modelled 80.5 20
Fold:TIM beta/alpha-barrel
Superfamily:Aldolase
Family:Class II FBP aldolase
41c4jgiB_
not modelled 80.3 12
PDB header:protein binding
Chain: B: PDB Molecule:putative uncharacterized protein;
PDBTitle: 1.5 angstrom crystal structure of a novel cobalamin-binding protein2 from desulfitobacterium hafniense dcb-2
42c3c52B_
not modelled 80.2 18
PDB header:lyase
Chain: B: PDB Molecule:fructose-bisphosphate aldolase;
PDBTitle: class ii fructose-1,6-bisphosphate aldolase from helicobacter pylori2 in complex with phosphoglycolohydroxamic acid, a competitive3 inhibitor
43c2iswB_
not modelled 77.8 22
PDB header:lyase
Chain: B: PDB Molecule:putative fructose-1,6-bisphosphate aldolase;
PDBTitle: structure of giardia fructose-1,6-biphosphate aldolase in2 complex with phosphoglycolohydroxamate
44c3ezxA_
not modelled 76.7 12
PDB header:transferase
Chain: A: PDB Molecule:monomethylamine corrinoid protein 1;
PDBTitle: structure of methanosarcina barkeri monomethylamine2 corrinoid protein
45c3nv9A_
not modelled 75.4 22
PDB header:oxidoreductase
Chain: A: PDB Molecule:malic enzyme;
PDBTitle: crystal structure of entamoeba histolytica malic enzyme
46c3q94B_
not modelled 75.2 23
PDB header:lyase
Chain: B: PDB Molecule:fructose-bisphosphate aldolase, class ii;
PDBTitle: the crystal structure of fructose 1,6-bisphosphate aldolase from2 bacillus anthracis str. 'ames ancestor'
47c3qayC_
not modelled 74.0 21
PDB header:lyase
Chain: C: PDB Molecule:endolysin;
PDBTitle: catalytic domain of cd27l endolysin targeting clostridia difficile
48d1ccwa_
not modelled 73.2 18
Fold:Flavodoxin-like
Superfamily:Cobalamin (vitamin B12)-binding domain
Family:Cobalamin (vitamin B12)-binding domain
49c3m1pA_
not modelled 72.4 24
PDB header:isomerase
Chain: A: PDB Molecule:ribose 5-phosphate isomerase;
PDBTitle: structure of ribose 5-phosphate isomerase type b from trypanosoma2 cruzi, soaked with allose-6-phosphate
50c3hlyA_
not modelled 71.7 17
PDB header:flavoprotein
Chain: A: PDB Molecule:flavodoxin-like domain;
PDBTitle: crystal structure of the flavodoxin-like domain from synechococcus sp2 q5mzp6_synp6 protein. northeast structural genomics consortium target3 snr135d.
51c4m6iA_
not modelled 69.3 19
PDB header:hydrolase
Chain: A: PDB Molecule:peptidoglycan amidase rv3717;
PDBTitle: structure of the reduced, zn-bound form of mycobacterium tuberculosis2 peptidoglycan amidase rv3717
52c1bmtB_
not modelled 68.9 11
PDB header:methyltransferase
Chain: B: PDB Molecule:methionine synthase;
PDBTitle: how a protein binds b12: a 3.o angstrom x-ray structure of2 the b12-binding domains of methionine synthase
53c1k98A_
not modelled 68.6 13
PDB header:transferase
Chain: A: PDB Molecule:methionine synthase;
PDBTitle: adomet complex of meth c-terminal fragment
54c3fniA_
not modelled 68.2 17
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative diflavin flavoprotein a 3;
PDBTitle: crystal structure of a diflavin flavoprotein a3 (all3895) from nostoc2 sp., northeast structural genomics consortium target nsr431a
55d1dosa_
not modelled 67.1 25
Fold:TIM beta/alpha-barrel
Superfamily:Aldolase
Family:Class II FBP aldolase
56c5ncdA_
not modelled 66.6 20
PDB header:hydrolase
Chain: A: PDB Molecule:peptidoglycan n-acetylglucosamine deacetylase;
PDBTitle: crystal structure of the polysaccharide deacetylase bc1974 from2 bacillus cereus in complex with (2s)-2-amino-5-3 (diaminomethylideneamino)-n-hydroxypentanamide
57c3ne8A_
not modelled 65.8 33
PDB header:hydrolase
Chain: A: PDB Molecule:n-acetylmuramoyl-l-alanine amidase;
PDBTitle: the crystal structure of a domain from n-acetylmuramoyl-l-alanine2 amidase of bartonella henselae str. houston-1
58d1xrsb1
not modelled 65.5 10
Fold:Flavodoxin-like
Superfamily:Cobalamin (vitamin B12)-binding domain
Family:Cobalamin (vitamin B12)-binding domain
59c5flzC_
not modelled 65.1 14
PDB header:cell cycle
Chain: C: PDB Molecule:tubulin gamma chain;
PDBTitle: cryo-em structure of gamma-tusc oligomers in a closed conformation
60c4lfnD_
not modelled 64.6 21
PDB header:isomerase
Chain: D: PDB Molecule:galactose-6-phosphate isomerase subunit b;
PDBTitle: crystal structure of d-galactose-6-phosphate isomerase in complex with2 d-ribulose
61c3whpA_
not modelled 64.5 26
PDB header:gene regulation
Chain: A: PDB Molecule:probable transcriptional regulator;
PDBTitle: crystal structure of the c-terminal domain of themus thermophilus litr2 in complex with cobalamin
62c3k7pA_
not modelled 64.5 22
PDB header:isomerase
Chain: A: PDB Molecule:ribose 5-phosphate isomerase;
PDBTitle: structure of mutant of ribose 5-phosphate isomerase type b from2 trypanosoma cruzi.
63c2zf8A_
not modelled 63.9 12
PDB header:structural protein
Chain: A: PDB Molecule:component of sodium-driven polar flagellar motor;
PDBTitle: crystal structure of moty
64d1t6t1_
not modelled 63.7 21
Fold:Toprim domain
Superfamily:Toprim domain
Family:Toprim domain
65c3qm3C_
not modelled 63.6 22
PDB header:lyase
Chain: C: PDB Molecule:fructose-bisphosphate aldolase;
PDBTitle: 1.85 angstrom resolution crystal structure of fructose-bisphosphate2 aldolase (fba) from campylobacter jejuni
66d2vvpa1
not modelled 63.2 22
Fold:Ribose/Galactose isomerase RpiB/AlsB
Superfamily:Ribose/Galactose isomerase RpiB/AlsB
Family:Ribose/Galactose isomerase RpiB/AlsB
67c4lfmA_
not modelled 60.5 23
PDB header:isomerase
Chain: A: PDB Molecule:galactose-6-phosphate isomerase subunit a;
PDBTitle: crystal structure of d-galactose-6-phosphate isomerase in complex with2 d-psicose
68c1y80A_
not modelled 60.2 16
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:predicted cobalamin binding protein;
PDBTitle: structure of a corrinoid (factor iiim)-binding protein from moorella2 thermoacetica
69c6h0cA_
not modelled 60.1 14
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative diflavin flavoprotein a 3;
PDBTitle: flv1 flavodiiron core from synechocystis sp. pcc6803
70c2yxbA_
not modelled 59.0 22
PDB header:isomerase
Chain: A: PDB Molecule:coenzyme b12-dependent mutase;
PDBTitle: crystal structure of the methylmalonyl-coa mutase alpha-subunit from2 aeropyrum pernix
71d1tubb1
not modelled 58.2 13
Fold:Tubulin nucleotide-binding domain-like
Superfamily:Tubulin nucleotide-binding domain-like
Family:Tubulin, GTPase domain
72c4pyrA_
not modelled 58.0 15
PDB header:transport protein
Chain: A: PDB Molecule:putative branched-chain amino acid abc transporter;
PDBTitle: structure of a putative branched-chain amino acid abc transporter from2 chromobacterium violaceum atcc 12472
73c2q9uB_
not modelled 56.8 15
PDB header:oxidoreductase
Chain: B: PDB Molecule:a-type flavoprotein;
PDBTitle: crystal structure of the flavodiiron protein from giardia2 intestinalis
74c2yfkA_
not modelled 56.1 23
PDB header:transferase
Chain: A: PDB Molecule:aspartate/ornithine carbamoyltransferase;
PDBTitle: crystal structure of a putative transcarbamoylase from2 enterococcus faecalis
75c6mu0A_
not modelled 55.7 19
PDB header:isomerase
Chain: A: PDB Molecule:probable ribose-5-phosphate isomerase b;
PDBTitle: crystal structure of ribose-5-phosphate isomerase b from mycoplasma2 genitalium with bound ribulose-5-phosphate
76c3j6vK_
not modelled 55.6 30
PDB header:ribosome
Chain: K: PDB Molecule:28s ribosomal protein s11, mitochondrial;
PDBTitle: cryo-em structure of the small subunit of the mammalian mitochondrial2 ribosome
77c2p2gD_
not modelled 55.5 18
PDB header:transferase
Chain: D: PDB Molecule:ornithine carbamoyltransferase;
PDBTitle: crystal structure of ornithine carbamoyltransferase from mycobacterium2 tuberculosis (rv1656): orthorhombic form
78c1uarA_
not modelled 54.9 10
PDB header:transferase
Chain: A: PDB Molecule:rhodanese;
PDBTitle: crystal structure of rhodanese from thermus thermophilus hb8
79d1b1ca_
not modelled 54.8 14
Fold:Flavodoxin-like
Superfamily:Flavoproteins
Family:Cytochrome p450 reductase N-terminal domain-like
80c4ne4A_
not modelled 53.4 17
PDB header:transport protein
Chain: A: PDB Molecule:abc transporter, substrate binding protein
PDBTitle: crystal structure of abc transporter substrate binding protein prox2 from agrobacterium tumefaciens cocrystalized with btb
81c1boiA_
not modelled 53.2 12
PDB header:transferase
Chain: A: PDB Molecule:rhodanese;
PDBTitle: n-terminally truncated rhodanese
82c3q98A_
not modelled 52.5 15
PDB header:transferase
Chain: A: PDB Molecule:transcarbamylase;
PDBTitle: structure of ygew encoded protein from e. coli
83c5ceeA_
not modelled 52.0 17
PDB header:oxidoreductase
Chain: A: PDB Molecule:nad-dependent malic enzyme;
PDBTitle: malic enzyme from candidatus phytoplasma aywb in complex with nad and2 mg2+
84d1o0sa1
not modelled 51.7 21
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Aminoacid dehydrogenase-like, C-terminal domain
85c3olhA_
not modelled 51.4 16
PDB header:transferase
Chain: A: PDB Molecule:3-mercaptopyruvate sulfurtransferase;
PDBTitle: human 3-mercaptopyruvate sulfurtransferase
86d1ycga1
not modelled 51.2 17
Fold:Flavodoxin-like
Superfamily:Flavoproteins
Family:Flavodoxin-related
87c4em8A_
not modelled 51.1 17
PDB header:isomerase
Chain: A: PDB Molecule:ribose 5-phosphate isomerase b;
PDBTitle: the structure of ribose 5-phosphate isomerase b from anaplasma2 phagocytophilum
88c1xrsB_
not modelled 50.4 9
PDB header:isomerase
Chain: B: PDB Molecule:d-lysine 5,6-aminomutase beta subunit;
PDBTitle: crystal structure of lysine 5,6-aminomutase in complex with plp,2 cobalamin, and 5'-deoxyadenosine
89c1okgA_
not modelled 50.4 13
PDB header:transferase
Chain: A: PDB Molecule:possible 3-mercaptopyruvate sulfurtransferase;
PDBTitle: 3-mercaptopyruvate sulfurtransferase from leishmania major
90d1dxha2
not modelled 50.4 16
Fold:ATC-like
Superfamily:Aspartate/ornithine carbamoyltransferase
Family:Aspartate/ornithine carbamoyltransferase
91c2w37A_
not modelled 50.3 15
PDB header:transferase
Chain: A: PDB Molecule:ornithine carbamoyltransferase, catabolic;
PDBTitle: crystal structure of the hexameric catabolic ornithine2 transcarbamylase from lactobacillus hilgardii
92c1e0cA_
not modelled 48.8 17
PDB header:sulfurtransferase
Chain: A: PDB Molecule:sulfurtransferase;
PDBTitle: sulfurtransferase from azotobacter vinelandii
93d1e5da1
not modelled 48.2 22
Fold:Flavodoxin-like
Superfamily:Flavoproteins
Family:Flavodoxin-related
94c3r6uA_
not modelled 48.1 9
PDB header:transport protein
Chain: A: PDB Molecule:choline-binding protein;
PDBTitle: crystal structure of choline binding protein opubc from bacillus2 subtilis
95c1a1sA_
not modelled 47.9 18
PDB header:transcarbamylase
Chain: A: PDB Molecule:ornithine carbamoyltransferase;
PDBTitle: ornithine carbamoyltransferase from pyrococcus furiosus
96c1o0sB_
not modelled 47.6 21
PDB header:oxidoreductase
Chain: B: PDB Molecule:nad-dependent malic enzyme;
PDBTitle: crystal structure of ascaris suum malic enzyme complexed with nadh
97c2p4nB_
not modelled 47.5 13
PDB header:transport protein
Chain: B: PDB Molecule:tubulin beta chain;
PDBTitle: human monomeric kinesin (1bg2) and bovine tubulin (1jff) docked into2 the 9-angstrom cryo-em map of nucleotide-free kinesin complexed to3 the microtubule
98d1o1xa_
not modelled 47.1 22
Fold:Ribose/Galactose isomerase RpiB/AlsB
Superfamily:Ribose/Galactose isomerase RpiB/AlsB
Family:Ribose/Galactose isomerase RpiB/AlsB
99d2qalk1
not modelled 47.0 29
Fold:Ribonuclease H-like motif
Superfamily:Translational machinery components
Family:Ribosomal protein L18 and S11
100c4h2dB_
not modelled 46.5 11
PDB header:oxidoreductase
Chain: B: PDB Molecule:nadph-dependent diflavin oxidoreductase 1;
PDBTitle: crystal structure of ndor1
101c2yqrA_
not modelled 46.1 26
PDB header:rna binding protein
Chain: A: PDB Molecule:kiaa0907 protein;
PDBTitle: solution structure of the kh domain in kiaa0907 protein
102c2pfsA_
not modelled 45.1 10
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:universal stress protein;
PDBTitle: crystal structure of universal stress protein from nitrosomonas2 europaea
103c5mp4C_
not modelled 45.0 22
PDB header:oxidoreductase
Chain: C: PDB Molecule:protoplast secreted protein 2;
PDBTitle: the structure of pst2p from saccharomyces cerevisiae
104c1vlvA_
not modelled 43.9 18
PDB header:transferase
Chain: A: PDB Molecule:ornithine carbamoyltransferase;
PDBTitle: crystal structure of ornithine carbamoyltransferase (tm1097) from2 thermotoga maritima at 2.25 a resolution
105c3wjaA_
not modelled 43.8 14
PDB header:oxidoreductase
Chain: A: PDB Molecule:nadp-dependent malic enzyme;
PDBTitle: the crystal structure of human cytosolic nadp(+)-dependent malic2 enzyme in apo form
106d2c1ia1
not modelled 43.5 13
Fold:7-stranded beta/alpha barrel
Superfamily:Glycoside hydrolase/deacetylase
Family:NodB-like polysaccharide deacetylase
107d1gq2a1
not modelled 43.2 14
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Aminoacid dehydrogenase-like, C-terminal domain
108d1pj3a1
not modelled 43.0 22
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Aminoacid dehydrogenase-like, C-terminal domain
109c2ynmC_
not modelled 42.5 13
PDB header:oxidoreductase
Chain: C: PDB Molecule:light-independent protochlorophyllide reductase subunit n;
PDBTitle: structure of the adpxalf3-stabilized transition state of the2 nitrogenase-like dark-operative protochlorophyllide oxidoreductase3 complex from prochlorococcus marinus with its substrate4 protochlorophyllide a
110c5d88A_
not modelled 42.5 14
PDB header:hydrolase
Chain: A: PDB Molecule:predicted protease of the collagenase family;
PDBTitle: the structure of the u32 peptidase mk0906
111c3jyvK_
not modelled 42.3 24
PDB header:ribosome
Chain: K: PDB Molecule:40s ribosomal protein s14(a);
PDBTitle: structure of the 40s rrna and proteins and p/e trna for eukaryotic2 ribosome based on cryo-em map of thermomyces lanuginosus ribosome at3 8.9a resolution
112c5jp6A_
not modelled 42.3 23
PDB header:hydrolase
Chain: A: PDB Molecule:putative polysaccharide deacetylase;
PDBTitle: bdellovibrio bacteriovorus peptidoglycan deacetylase bd3279
113c2aw5A_
not modelled 42.1 14
PDB header:oxidoreductase
Chain: A: PDB Molecule:nadp-dependent malic enzyme;
PDBTitle: crystal structure of a human malic enzyme
114c3edlA_
not modelled 42.1 20
PDB header:structural protein
Chain: A: PDB Molecule:alpha-tubulin;
PDBTitle: kinesin13-microtubule ring complex
115c1gz3B_
not modelled 42.0 22
PDB header:oxidoreductase
Chain: B: PDB Molecule:nad-dependent malic enzyme, mitochondrial;
PDBTitle: molecular mechanism for the regulation of human mitochondrial nad(p)+-2 dependent malic enzyme by atp and fumarate
116c4xfkA_
not modelled 42.0 14
PDB header:transport protein
Chain: A: PDB Molecule:putative branched chain amino acid abc transporter,
PDBTitle: crystal structure of leucine-, isoleucine-, valine-, threonine-, and2 alanine-binding protein from brucella ovis
117c2otcA_
not modelled 41.8 21
PDB header:transferase
Chain: A: PDB Molecule:ornithine carbamoyltransferase;
PDBTitle: ornithine transcarbamoylase complexed with n-2 (phosphonacetyl)-l-ornithine
118c1fvoB_
not modelled 41.7 17
PDB header:transferase
Chain: B: PDB Molecule:ornithine transcarbamylase;
PDBTitle: crystal structure of human ornithine transcarbamylase complexed with2 carbamoyl phosphate
119d2btoa1
not modelled 41.5 16
Fold:Tubulin nucleotide-binding domain-like
Superfamily:Tubulin nucleotide-binding domain-like
Family:Tubulin, GTPase domain
120d1ykga1
not modelled 41.4 16
Fold:Flavodoxin-like
Superfamily:Flavoproteins
Family:Cytochrome p450 reductase N-terminal domain-like

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite