Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3486_(-)_3905951_3906400
DateFri Aug 9 18:20:16 BST 2019
Unique Job ID1e2e4c715eab96b0
SequenceLHAEGPPSVI ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:17.203 Y:14.418 Z:12.418
Model (left) based on template c6nd4D_
Top template information
PDB header:ribosome
Chain: D: PDB Molecule:bud21;
PDBTitle: conformational switches control early maturation of the eukaryotic2 small ribosomal subunit
Confidence and coverage
Confidence: 15.8% Coverage: 7%
10 residues ( 7% of your sequence) have been modelled with 15.8% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
Please note: You must be registered and logged in to use Phyrealarm.
3D viewing
Interactive 3D view in JSmol
For other options to view your downloaded structure offline see the FAQ

Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c6nd4D_



15.8 50
PDB header:ribosome
Chain: D: PDB Molecule:bud21;
PDBTitle: conformational switches control early maturation of the eukaryotic2 small ribosomal subunit
2d1o9ga_



9.2 19
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:rRNA methyltransferase AviRa

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below