Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3589_(mutY)_4030672_4031586
DateFri Aug 9 18:20:27 BST 2019
Unique Job ID1d1773aeb77be8e4
SequenceMPHILPEPSV ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:39.315 Y:57.395 Z:51.248
Model (left) based on template c1rrqA_
Top template information
PDB header:hydrolase/dna
Chain: A: PDB Molecule:muty;
PDBTitle: muty adenine glycosylase in complex with dna containing an2 a:oxog pair
Confidence and coverage
Confidence:100.0% Coverage: 72%
218 residues ( 72% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in JSmol
For other options to view your downloaded structure offline see the FAQ

Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c1rrqA_
100.0 36
PDB header:hydrolase/dna
Chain: A: PDB Molecule:muty;
PDBTitle: muty adenine glycosylase in complex with dna containing an2 a:oxog pair
2c3n5nX_
100.0 36
PDB header:hydrolase
Chain: X: PDB Molecule:a/g-specific adenine dna glycosylase;
PDBTitle: crystal structure analysis of the catalytic domain and interdomain2 connector of human muty homologue
3d1kg2a_
100.0 33
Fold:DNA-glycosylase
Superfamily:DNA-glycosylase
Family:Mismatch glycosylase
4d1rrqa1
100.0 36
Fold:DNA-glycosylase
Superfamily:DNA-glycosylase
Family:Mismatch glycosylase
5d1keaa_
100.0 26
Fold:DNA-glycosylase
Superfamily:DNA-glycosylase
Family:Mismatch glycosylase
6d2abka_
100.0 24
Fold:DNA-glycosylase
Superfamily:DNA-glycosylase
Family:Endonuclease III
7d1orna_
100.0 23
Fold:DNA-glycosylase
Superfamily:DNA-glycosylase
Family:Endonuclease III
8c4uobA_
100.0 20
PDB header:lyase
Chain: A: PDB Molecule:endonuclease iii-3;
PDBTitle: crystal structure of deinococcus radiodurans endonuclease iii-3
9c4unfA_
100.0 30
PDB header:lyase
Chain: A: PDB Molecule:endonuclease iii-1;
PDBTitle: crystal structure of deinococcus radiodurans endonuclease iii-1
10d1pu6a_
100.0 16
Fold:DNA-glycosylase
Superfamily:DNA-glycosylase
Family:3-Methyladenine DNA glycosylase III (MagIII)
11d1ngna_
100.0 18
Fold:DNA-glycosylase
Superfamily:DNA-glycosylase
Family:Mismatch glycosylase
12c3n0uB_
100.0 14
PDB header:hydrolase, lyase
Chain: B: PDB Molecule:probable n-glycosylase/dna lyase;
PDBTitle: crystal structure of tm1821, the 8-oxoguanine dna glycosylase of2 thermotoga maritima
13c3kntC_
100.0 13
PDB header:hydrolase, lyase/dna
Chain: C: PDB Molecule:n-glycosylase/dna lyase;
PDBTitle: crystal structure of methanocaldococcus jannaschii 8-oxoguanine2 glycosylase/lyase in complex with 15mer dna containing 8-oxoguanine
14c4b24A_
100.0 13
PDB header:hydrolase/dna
Chain: A: PDB Molecule:probable dna-3-methyladenine glycosylase 2;
PDBTitle: unprecedented sculpting of dna at abasic sites by dna glycoslase2 homolog mag2
15c3fhgA_
100.0 11
PDB header:dna repair, hydrolase, lyase
Chain: A: PDB Molecule:n-glycosylase/dna lyase;
PDBTitle: crystal structure of sulfolobus solfataricus 8-oxoguanine dna2 glycosylase (ssogg)
16c3f10A_
100.0 17
PDB header:hydrolase, lyase
Chain: A: PDB Molecule:8-oxoguanine-dna-glycosylase;
PDBTitle: crystal structure of clostridium acetobutylicum 8-oxoguanine dna2 glycosylase in complex with 8-oxoguanosine
17c3s6iA_
100.0 17
PDB header:hydrolase/dna
Chain: A: PDB Molecule:dna-3-methyladenine glycosylase 1;
PDBTitle: schizosaccaromyces pombe 3-methyladenine dna glycosylase (mag1) in2 complex with abasic-dna.
18d2noha1
100.0 19
Fold:DNA-glycosylase
Superfamily:DNA-glycosylase
Family:DNA repair glycosylase, 2 C-terminal domains
19c4ejyA_
100.0 18
PDB header:hydrolase/dna
Chain: A: PDB Molecule:3-methyladenine dna glycosylase;
PDBTitle: structure of mbogg1 in complex with high affinity dna ligand
20c2yg8B_
100.0 25
PDB header:hydrolase
Chain: B: PDB Molecule:dna-3-methyladenine glycosidase ii, putative;
PDBTitle: structure of an unusual 3-methyladenine dna glycosylase ii (alka) from2 deinococcus radiodurans
21c1yqmA_
not modelled 99.9 20
PDB header:hydrolase/dna
Chain: A: PDB Molecule:n-glycosylase/dna lyase;
PDBTitle: catalytically inactive human 8-oxoguanine glycosylase2 crosslinked to 7-deazaguanine containing dna
22c1ko9A_
not modelled 99.9 22
PDB header:hydrolase
Chain: A: PDB Molecule:8-oxoguanine dna glycosylase;
PDBTitle: native structure of the human 8-oxoguanine dna glycosylase2 hogg1
23d1mpga1
not modelled 99.9 20
Fold:DNA-glycosylase
Superfamily:DNA-glycosylase
Family:DNA repair glycosylase, 2 C-terminal domains
24c2jhnB_
not modelled 99.9 22
PDB header:hydrolase
Chain: B: PDB Molecule:3-methyladenine dna-glycosylase;
PDBTitle: 3-methyladenine dna-glycosylase from archaeoglobus fulgidus
25c2h56C_
not modelled 99.9 17
PDB header:hydrolase
Chain: C: PDB Molecule:dna-3-methyladenine glycosidase;
PDBTitle: crystal structure of dna-3-methyladenine glycosidase (10174367) from2 bacillus halodurans at 2.55 a resolution
26c1mpgB_
not modelled 99.9 22
PDB header:hydrolase
Chain: B: PDB Molecule:3-methyladenine dna glycosylase ii;
PDBTitle: 3-methyladenine dna glycosylase ii from escherichia coli
27c2jg6A_
not modelled 96.1 14
PDB header:hydrolase
Chain: A: PDB Molecule:dna-3-methyladenine glycosidase;
PDBTitle: crystal structure of a 3-methyladenine dna glycosylase i from2 staphylococcus aureus
28d2bcqa1
not modelled 96.0 16
Fold:SAM domain-like
Superfamily:DNA polymerase beta, N-terminal domain-like
Family:DNA polymerase beta, N-terminal domain-like
29d1jmsa1
not modelled 95.7 5
Fold:SAM domain-like
Superfamily:DNA polymerase beta, N-terminal domain-like
Family:DNA polymerase beta, N-terminal domain-like
30d2fmpa1
not modelled 95.6 18
Fold:SAM domain-like
Superfamily:DNA polymerase beta, N-terminal domain-like
Family:DNA polymerase beta, N-terminal domain-like
31d1nkua_
not modelled 95.6 17
Fold:DNA-glycosylase
Superfamily:DNA-glycosylase
Family:3-Methyladenine DNA glycosylase I (Tag)
32d1dgsa1
not modelled 95.5 22
Fold:SAM domain-like
Superfamily:RuvA domain 2-like
Family:NAD+-dependent DNA ligase, domain 3
33d1nzpa_
not modelled 95.4 16
Fold:SAM domain-like
Superfamily:DNA polymerase beta, N-terminal domain-like
Family:DNA polymerase beta, N-terminal domain-like
34d1ixra1
not modelled 95.2 27
Fold:SAM domain-like
Superfamily:RuvA domain 2-like
Family:DNA helicase RuvA subunit, middle domain
35c6h5hA_
not modelled 95.1 18
PDB header:unknown function
Chain: A: PDB Molecule:polb4;
PDBTitle: a computationally designed drp lyase domain reconstructed from two2 heterologous fragments
36d2bgwa1
not modelled 94.5 13
Fold:SAM domain-like
Superfamily:RuvA domain 2-like
Family:Hef domain-like
37c8iczA_
not modelled 94.5 18
PDB header:transferase/dna
Chain: A: PDB Molecule:protein (dna polymerase beta (e.c.2.7.7.7));
PDBTitle: dna polymerase beta (pol b) (e.c.2.7.7.7) complexed with2 seven base pairs of dna; soaked in the presence of of datp3 (1 millimolar), mncl2 (5 millimolar), and lithium sulfate4 (75 millimolar)
38d1dk2a_
not modelled 94.4 17
Fold:SAM domain-like
Superfamily:DNA polymerase beta, N-terminal domain-like
Family:DNA polymerase beta, N-terminal domain-like
39d1mkma1
not modelled 94.3 17
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Transcriptional regulator IclR, N-terminal domain
40c2h5xA_
not modelled 94.1 20
PDB header:dna binding protein
Chain: A: PDB Molecule:holliday junction atp-dependent dna helicase ruva;
PDBTitle: ruva from mycobacterium tuberculosis
41c2mutA_
not modelled 94.0 18
PDB header:hydrolase
Chain: A: PDB Molecule:dna excision repair protein ercc-1;
PDBTitle: solution structure of the f231l mutant ercc1-xpf dimerization region
42c1ixrA_
not modelled 94.0 22
PDB header:hydrolase
Chain: A: PDB Molecule:holliday junction dna helicase ruva;
PDBTitle: ruva-ruvb complex
43d1bvsa2
not modelled 94.0 22
Fold:SAM domain-like
Superfamily:RuvA domain 2-like
Family:DNA helicase RuvA subunit, middle domain
44c1vddC_
not modelled 93.7 35
PDB header:recombination
Chain: C: PDB Molecule:recombination protein recr;
PDBTitle: crystal structure of recombinational repair protein recr
45d1vdda_
not modelled 93.7 35
Fold:Recombination protein RecR
Superfamily:Recombination protein RecR
Family:Recombination protein RecR
46d1szpa1
not modelled 93.6 21
Fold:SAM domain-like
Superfamily:Rad51 N-terminal domain-like
Family:DNA repair protein Rad51, N-terminal domain
47d1cuka2
not modelled 93.2 36
Fold:SAM domain-like
Superfamily:RuvA domain 2-like
Family:DNA helicase RuvA subunit, middle domain
48c1d8lA_
not modelled 93.2 36
PDB header:gene regulation
Chain: A: PDB Molecule:protein (holliday junction dna helicase ruva);
PDBTitle: e. coli holliday junction binding protein ruva nh2 region lacking2 domain iii
49c1ixrB_
not modelled 93.1 32
PDB header:hydrolase
Chain: B: PDB Molecule:holliday junction dna helicase ruva;
PDBTitle: ruva-ruvb complex
50c2owoA_
not modelled 93.1 33
PDB header:ligase/dna
Chain: A: PDB Molecule:dna ligase;
PDBTitle: last stop on the road to repair: structure of e.coli dna ligase bound2 to nicked dna-adenylate
51c2bcuA_
not modelled 93.0 16
PDB header:transferase, lyase/dna
Chain: A: PDB Molecule:dna polymerase lambda;
PDBTitle: dna polymerase lambda in complex with a dna duplex2 containing an unpaired damp and a t:t mismatch
52c5zvqA_
not modelled 92.8 38
PDB header:recombination
Chain: A: PDB Molecule:recombination protein recr;
PDBTitle: crystal structure of recombination mediator protein recr
53d1x2ia1
not modelled 92.8 15
Fold:SAM domain-like
Superfamily:RuvA domain 2-like
Family:Hef domain-like
54d1kfta_
not modelled 92.7 11
Fold:SAM domain-like
Superfamily:RuvA domain 2-like
Family:Excinuclease UvrC C-terminal domain
55c1kftA_
not modelled 92.7 11
PDB header:dna binding protein
Chain: A: PDB Molecule:excinuclease abc subunit c;
PDBTitle: solution structure of the c-terminal domain of uvrc from e-2 coli
56c3c1zA_
not modelled 92.7 22
PDB header:dna binding protein
Chain: A: PDB Molecule:dna integrity scanning protein disa;
PDBTitle: structure of the ligand-free form of a bacterial dna damage sensor2 protein
57c1mkmA_
not modelled 92.5 17
PDB header:transcription
Chain: A: PDB Molecule:iclr transcriptional regulator;
PDBTitle: crystal structure of the thermotoga maritima iclr
58c2ihmA_
not modelled 92.4 19
PDB header:transferase/dna
Chain: A: PDB Molecule:dna polymerase mu;
PDBTitle: polymerase mu in ternary complex with gapped 11mer dna duplex and2 bound incoming nucleotide
59c5z2vB_
not modelled 92.4 38
PDB header:dna binding protein
Chain: B: PDB Molecule:recombination protein recr;
PDBTitle: crystal structure of recr from pseudomonas aeruginosa pao1
60d2a1jb1
not modelled 92.4 18
Fold:SAM domain-like
Superfamily:RuvA domain 2-like
Family:Hef domain-like
61c3auoB_
not modelled 92.3 26
PDB header:transferase/dna
Chain: B: PDB Molecule:dna polymerase beta family (x family);
PDBTitle: dna polymerase x from thermus thermophilus hb8 ternary complex with 1-2 nt gapped dna and ddgtp
62d2i1qa1
not modelled 92.0 13
Fold:SAM domain-like
Superfamily:Rad51 N-terminal domain-like
Family:DNA repair protein Rad51, N-terminal domain
63d2duya1
not modelled 91.8 35
Fold:SAM domain-like
Superfamily:RuvA domain 2-like
Family:ComEA-like
64d2edua1
not modelled 91.8 17
Fold:SAM domain-like
Superfamily:RuvA domain 2-like
Family:ComEA-like
65c1kdhA_
not modelled 91.5 5
PDB header:transferase/dna
Chain: A: PDB Molecule:terminal deoxynucleotidyltransferase short
PDBTitle: binary complex of murine terminal deoxynucleotidyl2 transferase with a primer single stranded dna
66c4glxA_
not modelled 91.4 33
PDB header:ligase/ligase inhibitor/dna
Chain: A: PDB Molecule:dna ligase;
PDBTitle: dna ligase a in complex with inhibitor
67d1pzna1
not modelled 91.4 19
Fold:SAM domain-like
Superfamily:Rad51 N-terminal domain-like
Family:DNA repair protein Rad51, N-terminal domain
68d2hr3a1
not modelled 90.3 24
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
69c1b22A_
not modelled 90.0 13
PDB header:dna binding protein
Chain: A: PDB Molecule:dna repair protein rad51;
PDBTitle: rad51 (n-terminal domain)
70d1b22a_
not modelled 90.0 13
Fold:SAM domain-like
Superfamily:Rad51 N-terminal domain-like
Family:DNA repair protein Rad51, N-terminal domain
71c2bhnD_
not modelled 90.0 19
PDB header:hydrolase
Chain: D: PDB Molecule:xpf endonuclease;
PDBTitle: xpf from aeropyrum pernix
72d1ku9a_
not modelled 89.8 14
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:DNA-binding protein Mj223
73c1hjpA_
not modelled 89.5 30
PDB header:dna recombination
Chain: A: PDB Molecule:ruva;
PDBTitle: holliday junction binding protein ruva from e. coli
74c5h1aC_
not modelled 89.3 15
PDB header:transcription regulator
Chain: C: PDB Molecule:iclr transcription factor homolog;
PDBTitle: crystal structure of an iclr homolog from microbacterium sp. strain2 hm58-2
75d2axtu1
not modelled 89.3 14
Fold:SAM domain-like
Superfamily:PsbU/PolX domain-like
Family:PsbU-like
76d3bzka1
not modelled 89.2 16
Fold:SAM domain-like
Superfamily:RuvA domain 2-like
Family:Tex HhH-containing domain-like
77c2h09A_
not modelled 89.2 14
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator mntr;
PDBTitle: crystal structure of diphtheria toxin repressor like protein2 from e. coli
78c1f5tA_
not modelled 89.1 16
PDB header:transcription/dna
Chain: A: PDB Molecule:diphtheria toxin repressor;
PDBTitle: diphtheria tox repressor (c102d mutant) complexed with2 nickel and dtxr consensus binding sequence
79c1s5lu_
not modelled 88.9 14
PDB header:photosynthesis
Chain: U: PDB Molecule:photosystem ii 12 kda extrinsic protein;
PDBTitle: architecture of the photosynthetic oxygen evolving center
80c2it0A_
not modelled 88.9 16
PDB header:transcription/dna
Chain: A: PDB Molecule:iron-dependent repressor ider;
PDBTitle: crystal structure of a two-domain ider-dna complex crystal2 form ii
81c1dgsB_
not modelled 88.8 19
PDB header:ligase
Chain: B: PDB Molecule:dna ligase;
PDBTitle: crystal structure of nad+-dependent dna ligase from t.2 filiformis
82c5ol9A_
not modelled 88.4 4
PDB header:transcription
Chain: A: PDB Molecule:transcription elongation factor, mitochondrial;
PDBTitle: structure of human mitochondrial transcription elongation factor2 (tefm) n-terminal domain
83c5jbrA_
not modelled 88.3 14
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein bcav_2135;
PDBTitle: crystal structure of uncharacterized protein bcav_2135 from2 beutenbergia cavernae
84c3mq0A_
not modelled 87.4 24
PDB header:transcription repressor
Chain: A: PDB Molecule:transcriptional repressor of the blcabc operon;
PDBTitle: crystal structure of agobacterium tumefaciens repressor blcr
85c4bxoA_
not modelled 87.4 10
PDB header:hydrolase/dna
Chain: A: PDB Molecule:fanconi anemia group m protein;
PDBTitle: architecture and dna recognition elements of the fanconi anemia fancm-2 faap24 complex
86c2kp7A_
not modelled 86.7 15
PDB header:hydrolase
Chain: A: PDB Molecule:crossover junction endonuclease mus81;
PDBTitle: solution nmr structure of the mus81 n-terminal hhh.2 northeast structural genomics consortium target mmt1a
87c3psfA_
not modelled 86.3 17
PDB header:transcription
Chain: A: PDB Molecule:transcription elongation factor spt6;
PDBTitle: crystal structure of the spt6 core domain from saccharomyces2 cerevisiae, form spt6(236-1259)
88c5y6iB_
not modelled 86.0 15
PDB header:transcription
Chain: B: PDB Molecule:transcriptional regulator kdgr;
PDBTitle: crystal structure of pseudomonas aeruginosa hmgr
89c2o0yB_
not modelled 85.9 23
PDB header:transcription
Chain: B: PDB Molecule:transcriptional regulator;
PDBTitle: crystal structure of putative transcriptional regulator rha1_ro069532 (iclr-family) from rhodococcus sp.
90c2va8A_
not modelled 85.9 18
PDB header:hydrolase
Chain: A: PDB Molecule:ski2-type helicase;
PDBTitle: dna repair helicase hel308
91c6gmhM_
not modelled 85.8 23
PDB header:transcription
Chain: M: PDB Molecule:transcription elongation factor spt6,transcription
PDBTitle: structure of activated transcription complex pol ii-dsif-paf-spt6
92c1v9pB_
not modelled 85.4 19
PDB header:ligase
Chain: B: PDB Molecule:dna ligase;
PDBTitle: crystal structure of nad+-dependent dna ligase
93c2xroE_
not modelled 85.4 13
PDB header:dna-binding protein/dna
Chain: E: PDB Molecule:hth-type transcriptional regulator ttgv;
PDBTitle: crystal structure of ttgv in complex with its dna operator
94c1fx7C_
not modelled 85.2 16
PDB header:signaling protein
Chain: C: PDB Molecule:iron-dependent repressor ider;
PDBTitle: crystal structure of the iron-dependent regulator (ider) from2 mycobacterium tuberculosis
95d1z6ra1
not modelled 85.1 18
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:ROK associated domain
96c5w1eA_
not modelled 84.8 21
PDB header:transcription
Chain: A: PDB Molecule:putative transcriptional regulator;
PDBTitle: pobr in complex with phb
97c6cmvA_
not modelled 84.8 18
PDB header:gene regulation
Chain: A: PDB Molecule:transcriptional regulator lrs14-like protein;
PDBTitle: crystal structure of archaeal biofilm regulator (abfr2) from2 sulfolobus acidocaldarius
98c5whmB_
not modelled 84.7 12
PDB header:transcription
Chain: B: PDB Molecule:iclr family transcriptional regulator;
PDBTitle: crystal structure of iclr family transcriptional regulator from2 brucella abortus
99c6iv7B_
not modelled 84.6 20
PDB header:transferase
Chain: B: PDB Molecule:methyltransferase lepi;
PDBTitle: the crystal structure of a sam-dependent enzyme from aspergillus2 flavus
100c5zb8B_
not modelled 84.4 7
PDB header:dna binding protein
Chain: B: PDB Molecule:pfuendoq;
PDBTitle: crystal structure of the novel lesion-specific endonuclease pfuendoq2 from pyrococcus furiosus
101d1tw3a1
not modelled 84.3 22
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Plant O-methyltransferase, N-terminal domain
102d1z05a1
not modelled 84.1 18
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:ROK associated domain
103c2lyhA_
not modelled 83.9 19
PDB header:dna binding protein
Chain: A: PDB Molecule:fanconi anemia-associated protein of 24 kda;
PDBTitle: structure of faap24 residues 141-215
104c2oceA_
not modelled 83.6 20
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein pa5201;
PDBTitle: crystal structure of tex family protein pa5201 from2 pseudomonas aeruginosa
105c2g7uB_
not modelled 83.5 25
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:transcriptional regulator;
PDBTitle: 2.3 a structure of putative catechol degradative operon regulator from2 rhodococcus sp. rha1
106d2fbha1
not modelled 83.3 23
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
107c4bxoB_
not modelled 83.2 19
PDB header:hydrolase/dna
Chain: B: PDB Molecule:fanconi anemia-associated protein of 24 kda;
PDBTitle: architecture and dna recognition elements of the fanconi anemia fancm-2 faap24 complex
108c1nomA_
not modelled 82.7 29
PDB header:nucleotidyltransferase
Chain: A: PDB Molecule:dna polymerase beta;
PDBTitle: dna polymerase beta (pol b) (e.c.2.7.7.7), 31-kd domain; soaked in the2 presence of mncl2 (5 millimolar)
109c5cviB_
not modelled 82.3 13
PDB header:transcription regulator
Chain: B: PDB Molecule:slor;
PDBTitle: structure of the manganese regulator slor
110c3psiA_
not modelled 82.3 17
PDB header:transcription
Chain: A: PDB Molecule:transcription elongation factor spt6;
PDBTitle: crystal structure of the spt6 core domain from saccharomyces2 cerevisiae, form spt6(239-1451)
111c2x4hA_
not modelled 82.0 10
PDB header:transcription
Chain: A: PDB Molecule:hypothetical protein sso2273;
PDBTitle: crystal structure of the hypothetical protein sso2273 from2 sulfolobus solfataricus
112d1szpb1
not modelled 81.9 20
Fold:SAM domain-like
Superfamily:Rad51 N-terminal domain-like
Family:DNA repair protein Rad51, N-terminal domain
113d1g3wa1
not modelled 81.8 15
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Iron-dependent repressor protein
114c2i5hA_
not modelled 81.7 24
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein af1531;
PDBTitle: crystal structure of af1531 from archaeoglobus fulgidus,2 pfam duf655
115d2i5ha1
not modelled 81.7 24
Fold:AF1531-like
Superfamily:AF1531-like
Family:AF1531-like
116c4nb5D_
not modelled 81.5 20
PDB header:dna binding protein
Chain: D: PDB Molecule:dna binding protein;
PDBTitle: crystal structure of a transcriptional regulator
117c4o6jA_
not modelled 81.5 13
PDB header:metal binding protein
Chain: A: PDB Molecule:iron-dependent transcription repressor related protein;
PDBTitle: crystal sturucture of t. acidophilum ider
118c2csdB_
not modelled 81.4 25
PDB header:isomerase
Chain: B: PDB Molecule:topoisomerase v;
PDBTitle: crystal structure of topoisomerase v (61 kda fragment)
119c5agaA_
not modelled 81.2 12
PDB header:transferase
Chain: A: PDB Molecule:dna polymerase theta;
PDBTitle: crystal structure of the helicase domain of human dna2 polymerase theta in complex with amppnp
120c3deuB_
not modelled 80.8 19
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator slya;
PDBTitle: crystal structure of transcription regulatory protein slya from2 salmonella typhimurium in complex with salicylate ligands

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite