Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3607c_(folB)_4048923_4049324
DateFri Aug 9 18:20:29 BST 2019
Unique Job ID969ee3d5a635e4ef
SequenceMADRIELRGL ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:51.835 Y:30.876 Z:36.915
Model (left) based on template d1dhna_
Top template information
Fold:T-fold
Superfamily:Tetrahydrobiopterin biosynthesis enzymes-like
Family:DHN aldolase/epimerase
Confidence and coverage
Confidence:100.0% Coverage: 90%
120 residues ( 90% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in JSmol
For other options to view your downloaded structure offline see the FAQ

Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1dhna_



100.0 33
Fold:T-fold
Superfamily:Tetrahydrobiopterin biosynthesis enzymes-like
Family:DHN aldolase/epimerase
2d1nbua_



100.0 100
Fold:T-fold
Superfamily:Tetrahydrobiopterin biosynthesis enzymes-like
Family:DHN aldolase/epimerase
3c5f3mA_



100.0 35
PDB header:isomerase
Chain: A: PDB Molecule:7,8-dihydroneopterin aldolase;
PDBTitle: crystal structure of dihydroneopterin aldolase from bacillus anthracis2 complexed with l-neopterin at 1.5 angstroms resolution .
4c1sqlN_



100.0 42
PDB header:lyase
Chain: N: PDB Molecule:dihydroneopterin aldolase;
PDBTitle: crystal structure of 7,8-dihydroneopterin aldolase in2 complex with guanine
5d1sqla_



100.0 42
Fold:T-fold
Superfamily:Tetrahydrobiopterin biosynthesis enzymes-like
Family:DHN aldolase/epimerase
6c2o90A_



100.0 32
PDB header:lyase
Chain: A: PDB Molecule:dihydroneopterin aldolase;
PDBTitle: atomic resolution crystal structure of e.coli dihydroneopterin2 aldolase in complex with neopterin
7d1b9la_



100.0 23
Fold:T-fold
Superfamily:Tetrahydrobiopterin biosynthesis enzymes-like
Family:DHN aldolase/epimerase
8c2cg8B_



100.0 24
PDB header:lyase/transferase
Chain: B: PDB Molecule:dihydroneopterin aldolase 6-hydroxymethyl-7,8-
PDBTitle: the bifunctional dihydroneopterin aldolase 6-hydroxymethyl-2 7,8-dihydropterin synthase from streptococcus pneumoniae
9c3v9oA_



100.0 27
PDB header:lyase
Chain: A: PDB Molecule:dihydroneopterin aldolase;
PDBTitle: crystal structure of dihydroneopterin aldolase (bth_i0291) from2 burkholderia thailendensis bound to guanine.
10c4aeyA_



100.0 25
PDB header:isomerase
Chain: A: PDB Molecule:d-erythro-7,8-dihydroneopterin triphosphate epimerase;
PDBTitle: crystal structure of folx from pseudomonas aeruginosa
11d2ibaa1



90.9 13
Fold:T-fold
Superfamily:Tetrahydrobiopterin biosynthesis enzymes-like
Family:Urate oxidase (uricase)
12c5m98H_



89.3 16
PDB header:oxidoreductase
Chain: H: PDB Molecule:uricase;
PDBTitle: crystal structure of urate oxidase from zebrafish
13d2yzca1



87.6 12
Fold:T-fold
Superfamily:Tetrahydrobiopterin biosynthesis enzymes-like
Family:Urate oxidase (uricase)
14d1j2ga1



86.7 10
Fold:T-fold
Superfamily:Tetrahydrobiopterin biosynthesis enzymes-like
Family:Urate oxidase (uricase)
15c1r56H_



83.7 13
PDB header:oxidoreductase
Chain: H: PDB Molecule:uricase;
PDBTitle: uncomplexed urate oxidase from aspergillus flavus
16c2yzbA_



82.4 12
PDB header:oxidoreductase
Chain: A: PDB Molecule:uricase;
PDBTitle: crystal structure of uricase from arthrobacter globiformis2 in complex with uric acid (substrate)
17c1j2gC_



76.1 10
PDB header:oxidoreductase
Chain: C: PDB Molecule:uricase;
PDBTitle: crystal structure of urate oxidase from bacillus sp. tb-90 co-2 crystallized with 8-azaxanthine
18c4r99B_



74.8 10
PDB header:hydrolase
Chain: B: PDB Molecule:uricase;
PDBTitle: crystal structure of a uricase from bacillus fastidious
19c2dj6B_



62.9 23
PDB header:lyase
Chain: B: PDB Molecule:hypothetical protein ph0634;
PDBTitle: crystal structure of 6-pyruvoyl tetrahydrobiopterin synthase from2 pyrococcus horikoshii ot3
20c3d2oB_



58.0 15
PDB header:hydrolase, biosynthetic protein
Chain: B: PDB Molecule:upf0343 protein ngo0387;
PDBTitle: crystal structure of manganese-metallated gtp cyclohydrolase type ib
21c2r5rA_



not modelled 55.1 10
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:upf0343 protein ne1163;
PDBTitle: the crystal structure of duf198 from nitrosomonas europaea2 atcc 19718
22c5jyxB_



not modelled 49.6 15
PDB header:transferase
Chain: B: PDB Molecule:archeaosine synthase quef-like;
PDBTitle: crystal structure of the covalent thioimide intermediate of the2 archaeosine synthase quef-like
23c4jndA_



not modelled 44.2 14
PDB header:hydrolase
Chain: A: PDB Molecule:ca(2+)/calmodulin-dependent protein kinase phosphatase;
PDBTitle: structure of a c.elegans sex determining protein
24c2mraA_



not modelled 37.7 20
PDB header:de novo protein
Chain: A: PDB Molecule:de novo designed protein or459;
PDBTitle: solution nmr structure of de novo designed protein, northeast2 structural genomics consortium (nesg) target or459
25d1y13a_



not modelled 30.6 25
Fold:T-fold
Superfamily:Tetrahydrobiopterin biosynthesis enzymes-like
Family:6-pyruvoyl tetrahydropterin synthase
26d1j2ga2



not modelled 18.2 7
Fold:T-fold
Superfamily:Tetrahydrobiopterin biosynthesis enzymes-like
Family:Urate oxidase (uricase)
27d2a0sa1



not modelled 16.9 19
Fold:T-fold
Superfamily:Tetrahydrobiopterin biosynthesis enzymes-like
Family:6-pyruvoyl tetrahydropterin synthase
28c2i44A_



not modelled 14.6 12
PDB header:hydrolase
Chain: A: PDB Molecule:serine-threonine phosphatase 2c;
PDBTitle: crystal structure of serine-threonine phosphatase 2c from2 toxoplasma gondii
29d1a6qa2



not modelled 12.0 14
Fold:PP2C-like
Superfamily:PP2C-like
Family:PP2C-like
30c2qnkA_



not modelled 9.6 22
PDB header:oxidoreductase
Chain: A: PDB Molecule:3-hydroxyanthranilate 3,4-dioxygenase;
PDBTitle: crystal structure of human 3-hydroxyanthranilate 3,4-dioxygenase
31c6a4mA_



not modelled 9.3 9
PDB header:hydrolase
Chain: A: PDB Molecule:uric acid degradation bifunctional protein pucl;
PDBTitle: structure of urate oxidase from bacillus subtilis 168
32c4e9iB_



not modelled 9.1 25
PDB header:oxidoreductase
Chain: B: PDB Molecule:glucose-6-phosphate 1-dehydrogenase;
PDBTitle: glucose-6-p dehydrogenase (apo form) from trypanosoma cruzi
33c3gdzA_



not modelled 8.5 5
PDB header:ligase
Chain: A: PDB Molecule:arginyl-trna synthetase;
PDBTitle: crystal structure of arginyl-trna synthetase from klebsiella2 pneumoniae subsp. pneumoniae
34c1is7F_



not modelled 8.5 17
PDB header:hydrolase/protein binding
Chain: F: PDB Molecule:gtp cyclohydrolase i;
PDBTitle: crystal structure of rat gtpchi/gfrp stimulatory complex
35d1wpla_



not modelled 8.5 17
Fold:T-fold
Superfamily:Tetrahydrobiopterin biosynthesis enzymes-like
Family:GTP cyclohydrolase I
36d1a04a2



not modelled 8.4 16
Fold:Flavodoxin-like
Superfamily:CheY-like
Family:CheY-related
37c4uqfB_



not modelled 8.3 19
PDB header:hydrolase
Chain: B: PDB Molecule:gtp cyclohydrolase 1;
PDBTitle: crystal structure of listeria monocytogenes gtp cyclohydrolase i
38d2ieca1



not modelled 8.2 19
Fold:MK0786-like
Superfamily:MK0786-like
Family:MK0786-like
39c5i8lA_



not modelled 8.1 20
PDB header:hydrolase
Chain: A: PDB Molecule:lysozyme;
PDBTitle: crystal structure of the full-length cell wall-binding module of cpl72 mutant r223a
40d1a8ra_



not modelled 8.0 10
Fold:T-fold
Superfamily:Tetrahydrobiopterin biosynthesis enzymes-like
Family:GTP cyclohydrolase I
41c2zw2B_



not modelled 7.9 16
PDB header:ligase
Chain: B: PDB Molecule:putative uncharacterized protein sts178;
PDBTitle: crystal structure of formylglycinamide ribonucleotide amidotransferase2 iii from sulfolobus tokodaii (stpurs)
42c4yzhA_



not modelled 7.5 13
PDB header:hydrolase/hydrolase substrate
Chain: A: PDB Molecule:protein phosphatase 2c 57;
PDBTitle: structure of the arabidopsis tap38/pph1 in complex with plhcb12 phosphopeptide substrate
43d1b66a_



not modelled 6.5 20
Fold:T-fold
Superfamily:Tetrahydrobiopterin biosynthesis enzymes-like
Family:6-pyruvoyl tetrahydropterin synthase
44c1a6qA_



not modelled 6.3 15
PDB header:hydrolase
Chain: A: PDB Molecule:phosphatase 2c;
PDBTitle: crystal structure of the protein serine/threonine phosphatase 2c at 22 a resolution
45d1yfua1



not modelled 6.1 21
Fold:Double-stranded beta-helix
Superfamily:RmlC-like cupins
Family:3-hydroxyanthranilic acid dioxygenase-like
46c1qkiE_



not modelled 6.0 25
PDB header:oxidoreductase
Chain: E: PDB Molecule:glucose-6-phosphate 1-dehydrogenase;
PDBTitle: x-ray structure of human glucose 6-phosphate dehydrogenase (variant2 canton r459l) complexed with structural nadp+
47c5l82A_



not modelled 6.0 57
PDB header:antibiotic
Chain: A: PDB Molecule:enterococcin k1;
PDBTitle: nmr structure of enterocin k1 in 50%/50% tfe/water
48c6fkfd_



not modelled 5.6 11
PDB header:membrane protein
Chain: D: PDB Molecule:atp synthase subunit beta, chloroplastic;
PDBTitle: chloroplast f1fo conformation 1
49d2apla1



not modelled 5.2 18
Fold:PG0816-like
Superfamily:PG0816-like
Family:PG0816-like
50d1nt2b_



not modelled 5.1 14
Fold:Nop domain
Superfamily:Nop domain
Family:Nop domain
51d2yzca2



not modelled 5.1 9
Fold:T-fold
Superfamily:Tetrahydrobiopterin biosynthesis enzymes-like
Family:Urate oxidase (uricase)

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite