Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3642c_(-)_4080750_4080944
DateFri Aug 9 18:20:33 BST 2019
Unique Job IDba3377874f5c678c
SequenceVFVQATELQK ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:14.912 Y:16.527 Z:31.903
Model (left) based on template c6btcA_
Top template information
PDB header:dna binding protein
Chain: A: PDB Molecule:lp1413 - sccmec type iv-encoded dna binding protein;
PDBTitle: sccmec type iv lp1413 - nucleic acids binding protein
Confidence and coverage
Confidence: 8.6% Coverage: 23%
15 residues ( 23% of your sequence) have been modelled with 8.6% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
Please note: You must be registered and logged in to use Phyrealarm.
Warning: 61% of your sequence is predicted disordered. Disordered regions cannot be meaningfully predicted.
3D viewing
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Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c6btcA_



8.6 40
PDB header:dna binding protein
Chain: A: PDB Molecule:lp1413 - sccmec type iv-encoded dna binding protein;
PDBTitle: sccmec type iv lp1413 - nucleic acids binding protein
2c2q5dD_



6.7 86
PDB header:protein transport
Chain: D: PDB Molecule:snurportin-1;
PDBTitle: crystal structure of human importin beta bound to the snurportin1 ibb-2 domain second crystal form
3d2hf5a1



5.6 67
Fold:EF Hand-like
Superfamily:EF-hand
Family:Calmodulin-like

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite