rv2480c
rv2480c
transposase
M. tuberculosis · H37Rv
[UniProt] [MycoBrowser] [AlphaFold] [Orthologs] [U19] [TnSeq DB] [SeqHub]
H37Rv Coordinates: 2785602 – 2785928
Vulnerability Index (VI):
M. smegmatis homologs MSMEG2676, MSMEG0724, MSMEG1720, MSMEG1716, MSMEG5096, [+ 5 remaining orthologs]
M. abscessus homologs MAB2087
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 Rv2477c Rv2478c Rv2479c Rv2480c Rv2481c plsB2
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>rv2480c_Rv2480c_dna
GAATACTGAGCGAGGTTTCGGTCTGGTTCCCAGGTTTGCAGGCCAAGCGGCCAATTAATTGGTTAATCCACAGTTACCGCTTCATTCACAGGATTGCGCGCGGCGACGGTCTCATCCCGGCAAATGTCGGTGTGGCCGAGGTGAATAGCACTCGGCATATGCGTGGGCAGTTCGCGGAATCACCCGGTGCCAACGCAACTGTGCCAACGCAACTAGGAAAGGAATGAGCAAATGTTCGAAACGCCACTGTGAACCGCCCCGGCATGTCCGGAGACTCCAGTTCTTGGAAAGGATGGGGTCATGTCAGGTGGTTCATCGAGGAGGTACCCGCCGGAGCTGCGTGAGCGGGCGGTGCGGATGGTCGCAGAGATCCGCGGTCAGCACGATTCGGAGTGGGCAGCGATCAGTGAGGTCGCCCGTCTACTTGGTGTTGGCTGCGCGGAGACGGTGCGTAAGTGGGTGCGCCAGGCGCAGGTCGATGCCGGCGCACGGCCCGGGACCACGACCGAAGAATCCGCTGAGCTGAAGCGCTTGCGGCGGGACAACGCCGAATTGCGAAGGGCGAACGCGATTTTAAAGACCGCGTCGGCTTTCTTCGCGGCCGAGCTCGACCGGCCAGCACGCTAA

Protein Sequence 

>Rv2480c_Rv2480c_protein
MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVDAGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELDRPAR

Essentiality:

Call Condition Type Source Notes
Non Essential in vitro TnSeq [DeJesus et al. (2017)]
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]

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