rv3798
rv3798
transposase
M. tuberculosis · H37Rv
[AlphaFold] [Orthologs] [Phyre2] [UniProt] [MycoBrowser] [U19] [TnSeq DB] [SeqHub]
H37Rv Coordinates: 4253171 – 4254505
Vulnerability Index (VI):
M. smegmatis homologs MSMEG5398, MSMEG2830, MSMEG1239, MSMEG0430
M. abscessus homologs
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 Rv3796 fadE35 Rv3798 accD4 pks13
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>rv3798_Rv3798_dna
CCTGGGAACGGGCAACCCGCGGCACCGACCGCAAGGCACTCGTCGCCCGCCTGTACGCGCGCCGGTATCTCGCCGACCAAGGCCCGCTGCGCGGTATCGACGCAGATTGCGATGAGGCGCTGCAGCGTTTCGACGAACTCGTGGCGGGCGCGTTCACTGCCGAGCAGACGTAAAAGCCCCCAATTCGTGGCTCTTCTGACACTTCCGTGGGTGAGTTTGTGTCCTGAGTAGGCGCACGTCGTTGTGGCTTAAGGTTTCTGGCTTGTCAAGGATCAGAAACACAAGGAGCCGACAACGACGTGCGCAATGTGAGGCTATTTCGTGCGCTGCTGGGTGTCGACAAGCGCACCGTGATTGAGGACATCGAATTCGAGGAGGATGACGCCGGAGACGGTGCGCGGGTGATCGCCCGGGTGCGGCCACGAAGTGCAGTGTTGCGCCGCTGTGGTCGCTGCGGTCGCAAGGCGTCCTGGTATGACCGCGGTGCGGGCCTGCGCCAATGGCGCAGTCTGGATTGGGGCACCGTCGAGGTGTTCTTGGAGGCCGAGGCGCCGCGGGTGAACTGCCCCACCCATGGGCCGACGGTGGTGGCGGTGCCGTGGGCGCGTCATCATGCCGGGCACACGTATGCTTTCGATGACACGGTGGCCTGGCTGGCGGTGGCGTGTTCGAAGACCGCGGTGTGCGAGTTGATGCGGATCGCCTGGCGCACCGTCGGGGCGATCGTGGCCCGGGTCTGGGCCGACACCGAAAAGCGCATTGACCGGTTCGCGAACTTGCGCCGCATCGGTATCGATGAGATCTCCTACAAGCGCCACCACCGGTACCTGACGGTGGTCGTCGATCACGACAGCGGCCGGTTGGTGTGGGCCGCCCCGGGCCACGACAAGGCCACCCTGGGCTTGTTCTTCGATGCCCTGGGCGCTGAGCGGGCCGCCCAGATTACTCACGTTTCGGCCGATGCCGCGGACTGGATCGCTGACGTGGTCACCGAGCGCTGCCCGGATGCGATTCAATGCGCCGATCCGTTTCATGTGGTGGCCTGGGCCACCGAGGCGCTCGACGTCGAGCGGCGCCGAGCCTGGAACGACGCACGGGCGATCGCGCGCACCGAACCCAAGTGGGGCCGGGGCCGGCCCGGTAAGAACGCCGCACCACGTCCGGGCCGCGAGCGGGCACGGCGGCTCAAGGGCGCCCGCTACGCGCTGTGGAAGAACCCCGAGGACCTCACCGAACGCCAAAGCGCCAAACTGGCCTGGATCGCCAAGACCGATCCCCGTCTGTATCGCGCCTACCTGCTCAAAGAGAGCCTGCGGCATGTGTTTTCGGTCAAGGGCGAGGAAGGTAAACAGGCCCTGGACCGGTGGATCTCCTGGGCCCAGCGCTGTCGCATCCCGGTATTCGTCGAGCTTGCCGCCCGCATCAAACGCCACCGGGTGGCCATCGACGCCGCCCTCGACCACGGCCTATCCCAAGGCCTGATCGAATCCACCAACACCAAGATCCGCCTACTGACCCGGATCGCGTTCGGATTCCGCTCACCACAAGCCCTCATCGCCCTAGCCATGCTCACCCTCGCCGGCCACCGCCCCACCCTGCCAGGCCGACACAACCACCCACAGATCAGTCAGTAG

Protein Sequence 

>Rv3798_Rv3798_protein
VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYDRGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLAVACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVVVDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGARYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLTLAGHRPTLPGRHNHPQISQ

Essentiality:

Call Condition Type Source Notes
Non Essential in vitro TnSeq [DeJesus et al. (2017)]
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]

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