rv3844
rv3844
transposase
M. tuberculosis · H37Rv
[AlphaFold] [Orthologs] [UniProt] [MycoBrowser] [U19] [TnSeq DB] [SeqHub]
H37Rv Coordinates: 4318953 – 4319444
Vulnerability Index (VI):
M. smegmatis homologs
M. abscessus homologs
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 Rv3843c Rv3844 Rv3845 sodA Rv3847
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>rv3844_Rv3844_dna
CTGAACTGACCCGGTTTAGGGAATTGGTGGCCAGGTTGCGGAAGTGCGCAGCATCGACGTGTACCTGGGTGAGGCATCGAATCATCGACAAGCACCGGAGCCGCGCGTGAACTCCCGCCGCGTTGTGGTCGGGGATGATGTGGGAGACCGGCCGGCAGTGCTGTGTACGAAGGTTCTCCCACCGCAACGAGTTCACGCACGACGGTCGGCTGGGTGGGCCCTGGAATACGTGAACTCTTCATCAACACAACATGATTGACGATGAAGGGGAGAACCTCCATGCACAACAACGCTAACCCGTGACTGCCGAGAATCCAGGACGGAGCAGGCGGACGCTGGTCGGAATCGACGCGGCGATCACGGCCTGTCACCACATCGCGATCCGCGATGATGTCGGTGCGAGGTCGATTCGATTCAGTGTCGAACCCACGCTGGCCGGACTGCGCACCCTCACCGACAAGCTCAGCGGTTACGACGATATCGACGCCACCGTGGAACCGACCTCGATGACGTGGCTGCCGCTCACGATCGCTGTCGAGAATGCCGGTGACACCATGCACATGGCCGGCGCGCGGCATTGCGCCCGGCTGCGGGGTGCGATCGTGGGCAAGAGCAAGTCCGACGTCATCGACGCCGAGGTTCTCACCCGCGCCAGCGAGGTGTTCGACCTGACGCCGCTGACACTGCCGACGCCCGCGCAGTTGGCGTTACGTCGATCGGTGATCCGACGTGCCGGCGCAGTGATTGACGCGAACCGGTCCTGGCGTCGGTTGATGTCGTTGGCGCGGTAG

Protein Sequence 

>Rv3844_Rv3844_protein
VTAENPGRSRRTLVGIDAAITACHHIAIRDDVGARSIRFSVEPTLAGLRTLTDKLSGYDDIDATVEPTSMTWLPLTIAVENAGDTMHMAGARHCARLRGAIVGKSKSDVIDAEVLTRASEVFDLTPLTLPTPAQLALRRSVIRRAGAVIDANRSWRRLMSLAR

Essentiality:

Call Condition Type Source Notes
Non Essential in vitro TnSeq [DeJesus et al. (2017)]
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]

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